Click here to switch to the map view.

The map label for this gene is yhbU [H]

Identifier: 51594847

GI number: 51594847

Start: 584883

End: 585878

Strand: Reverse

Name: yhbU [H]

Synonym: YPTB0495

Alternate gene names: 51594847

Gene position: 585878-584883 (Counterclockwise)

Preceding gene: 51594850

Following gene: 51594846

Centisome position: 12.35

GC content: 52.31

Gene sequence:

>996_bases
ATGGAGCTGCTGTGTCCTGCGGGTAACTTACCTGCATTAAAGGCCGCAATCGACAATGGTGCCGATGCGGTTTATATCGG
TTTGAAAGATGATACTAACGCCCGCCATTTTGCCGGCCTCAATTTCACCGATAAAAAGCTACAAGAAGCCGTTAACTACG
TTCATAGCCGTAAACGTAAATTACATATCGCCATTAACACCTTCGCCCACCCTGACGGCTATGCACGCTGGCAACGGGCG
GTGGATATGGCCGCACAACTTGGAGCTGATGCGCTGATCTTGGCAGACCTGGCGATGCTGGAATATGCTGCTGAACGTTA
TCCGCAGGTTGAGCGCCATGTCTCGGTACAAGCTTCTGCCACCAACGATGAAGCCATCCGCTTTTATCAACGCCATTTCG
ATGTCGCCCGGGTGGTATTGCCGCGTGTGCTCTCAATGCATCAGGTAAAACAGTTATCACGTACCAGCCCGGTTCCGCTG
GAAGTCTTCGCTTTTGGTAGTTTGTGTATTATGGCTGAAGGCCGTTGCTACCTTTCTTCCTATTTGACCGGTGAATCACC
CAATACCGTGGGTGCTTGCTCGCCCGCACGCTTTGTACGTTGGCAACAAACCCCACAAGGGATGGAATCCCGCCTCAACG
ACGTGTTGATTGACCGCTACGAAGACCATGAAAATGCCGGTTATCCTACACTGTGCAAAGGCCGCTATCGGGTAGATGAC
CAGCGCTACCATGCACTGGAAGAGCCGACGAGCCTGAATACCCTTGAGCTATTACCCGAATTATTTGCTGCCAATATTGC
CTCAGTAAAAATTGAAGGACGCCAGCGCAGCCCAGCCTACGTCAGCCAGGTTGCCAAAGTCTGGCGACAGGCGATTGACC
TCTATCAGGCGAATCCGGCGCAATTTGCCGCCAAAGCAGAATGGATGGAGCAACTGAGCGCAATGTCCGAAGGTACCCAG
ACAACACTGGGCGCTTATCATCGTAAGTGGCAGTAG

Upstream 100 bases:

>100_bases
CTAAAATTGCCGCTCGATAAAATACCAAGATCATCTATGCCCTTACATCTGCAACTTGAATCTGCAACTTGAAGTATGAG
GGGTATATCAGGGAAATTCT

Downstream 100 bases:

>100_bases
CCGGAGGAAATATGAAGTACGCCTTAGGCGCAGTACTCTATTACTGGCCAAAAACTGAGATTGAAACCTTTTATCACGCG
GCGGCCAACAGCAGTGCCGA

Product: protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MELLCPAGNLPALKAAIDNGADAVYIGLKDDTNARHFAGLNFTDKKLQEAVNYVHSRKRKLHIAINTFAHPDGYARWQRA
VDMAAQLGADALILADLAMLEYAAERYPQVERHVSVQASATNDEAIRFYQRHFDVARVVLPRVLSMHQVKQLSRTSPVPL
EVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGMESRLNDVLIDRYEDHENAGYPTLCKGRYRVDD
QRYHALEEPTSLNTLELLPELFAANIASVKIEGRQRSPAYVSQVAKVWRQAIDLYQANPAQFAAKAEWMEQLSAMSEGTQ
TTLGAYHRKWQ

Sequences:

>Translated_331_residues
MELLCPAGNLPALKAAIDNGADAVYIGLKDDTNARHFAGLNFTDKKLQEAVNYVHSRKRKLHIAINTFAHPDGYARWQRA
VDMAAQLGADALILADLAMLEYAAERYPQVERHVSVQASATNDEAIRFYQRHFDVARVVLPRVLSMHQVKQLSRTSPVPL
EVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGMESRLNDVLIDRYEDHENAGYPTLCKGRYRVDD
QRYHALEEPTSLNTLELLPELFAANIASVKIEGRQRSPAYVSQVAKVWRQAIDLYQANPAQFAAKAEWMEQLSAMSEGTQ
TTLGAYHRKWQ
>Mature_331_residues
MELLCPAGNLPALKAAIDNGADAVYIGLKDDTNARHFAGLNFTDKKLQEAVNYVHSRKRKLHIAINTFAHPDGYARWQRA
VDMAAQLGADALILADLAMLEYAAERYPQVERHVSVQASATNDEAIRFYQRHFDVARVVLPRVLSMHQVKQLSRTSPVPL
EVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGMESRLNDVLIDRYEDHENAGYPTLCKGRYRVDD
QRYHALEEPTSLNTLELLPELFAANIASVKIEGRQRSPAYVSQVAKVWRQAIDLYQANPAQFAAKAEWMEQLSAMSEGTQ
TTLGAYHRKWQ

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1789548, Length=331, Percent_Identity=87.9154078549849, Blast_Score=619, Evalue=1e-179,
Organism=Escherichia coli, GI1788397, Length=317, Percent_Identity=29.6529968454259, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI87081910, Length=293, Percent_Identity=30.3754266211604, Blast_Score=111, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 37204; Mature: 37204

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLCPAGNLPALKAAIDNGADAVYIGLKDDTNARHFAGLNFTDKKLQEAVNYVHSRKRK
CCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCE
LHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPQVERHVSVQASA
EEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHEEEEECC
TNDEAIRFYQRHFDVARVVLPRVLSMHQVKQLSRTSPVPLEVFAFGSLCIMAEGRCYLSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCHHHHH
YLTGESPNTVGACSPARFVRWQQTPQGMESRLNDVLIDRYEDHENAGYPTLCKGRYRVDD
HHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCH
QRYHALEEPTSLNTLELLPELFAANIASVKIEGRQRSPAYVSQVAKVWRQAIDLYQANPA
HHHHHHCCCCCCCHHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHH
QFAAKAEWMEQLSAMSEGTQTTLGAYHRKWQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MELLCPAGNLPALKAAIDNGADAVYIGLKDDTNARHFAGLNFTDKKLQEAVNYVHSRKRK
CCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCE
LHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPQVERHVSVQASA
EEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHEEEEECC
TNDEAIRFYQRHFDVARVVLPRVLSMHQVKQLSRTSPVPLEVFAFGSLCIMAEGRCYLSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCHHHHH
YLTGESPNTVGACSPARFVRWQQTPQGMESRLNDVLIDRYEDHENAGYPTLCKGRYRVDD
HHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCH
QRYHALEEPTSLNTLELLPELFAANIASVKIEGRQRSPAYVSQVAKVWRQAIDLYQANPA
HHHHHHCCCCCCCHHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHH
QFAAKAEWMEQLSAMSEGTQTTLGAYHRKWQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]