| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is zur [H]
Identifier: 51594725
GI number: 51594725
Start: 443899
End: 444408
Strand: Reverse
Name: zur [H]
Synonym: YPTB0371
Alternate gene names: 51594725
Gene position: 444408-443899 (Counterclockwise)
Preceding gene: 51594728
Following gene: 51594722
Centisome position: 9.37
GC content: 48.43
Gene sequence:
>510_bases ATGAACCCTATCAATCAGGAAAAGCTGCTCGCACAAGCTGAAAGCCTGTGCCAACAACGAAACGTCCGGCTGACCCCGCA ACGTCTTGAAGTATTACGTCTAATGGCGCAACAGCCCGGTGCAATTAGCGCTTATGATCTGCTGGATCTACTACGAGTCG CTGAGCCACAAGCCAAACCGCCTACCGTTTATCGCGCACTGGATTTTTTATTGGAGCAAGGGTTTATTCACCGTGTTGAA TCAGCCAATAGCTATGTTCTCTGCCACCACTTTGAAGAACCCACGCATACTTCTGCCTTGTTTATCTGTGATCGCTGCAA GATTGTGACAGAACGCCCTACCGTTGGTATTGAAGAGGCATTGGCACAGTTAGCAAAACAGTCAGGTTTTACACTGCGCC ATAGCGTGGTGGAAGCACACGGTTTATGTACTGAATGTGGGGTAGTTGAAGCCTGCGAAAGCCACGATGATTGTGAGCAT GACCACTCCATCGTCGTTAAAAAGAAGTAA
Upstream 100 bases:
>100_bases AAAATTGTGATCTCATAGCGCCATTTCCCTCCCCCCTATCGGCGATTACAGGTAAACATGATAAAATCACGTTCAATTCT AAAGCTGCGGGATGAATATG
Downstream 100 bases:
>100_bases TATCTTGATTAATAAGAAGTCGTATCGTGATTAAGATGAGATAGAACAGCAAAAAGCAAAAAGCAAAAAGCAAAAAGCAA AAAGCAAAAAGCAAAAAGCA
Product: zinc uptake transcriptional repressor
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MNPINQEKLLAQAESLCQQRNVRLTPQRLEVLRLMAQQPGAISAYDLLDLLRVAEPQAKPPTVYRALDFLLEQGFIHRVE SANSYVLCHHFEEPTHTSALFICDRCKIVTERPTVGIEEALAQLAKQSGFTLRHSVVEAHGLCTECGVVEACESHDDCEH DHSIVVKKK
Sequences:
>Translated_169_residues MNPINQEKLLAQAESLCQQRNVRLTPQRLEVLRLMAQQPGAISAYDLLDLLRVAEPQAKPPTVYRALDFLLEQGFIHRVE SANSYVLCHHFEEPTHTSALFICDRCKIVTERPTVGIEEALAQLAKQSGFTLRHSVVEAHGLCTECGVVEACESHDDCEH DHSIVVKKK >Mature_169_residues MNPINQEKLLAQAESLCQQRNVRLTPQRLEVLRLMAQQPGAISAYDLLDLLRVAEPQAKPPTVYRALDFLLEQGFIHRVE SANSYVLCHHFEEPTHTSALFICDRCKIVTERPTVGIEEALAQLAKQSGFTLRHSVVEAHGLCTECGVVEACESHDDCEH DHSIVVKKK
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=169, Percent_Identity=69.2307692307692, Blast_Score=243, Evalue=4e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 18983; Mature: 18983
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPINQEKLLAQAESLCQQRNVRLTPQRLEVLRLMAQQPGAISAYDLLDLLRVAEPQAKP CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC PTVYRALDFLLEQGFIHRVESANSYVLCHHFEEPTHTSALFICDRCKIVTERPTVGIEEA CHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCEEEECCCCCCHHHH LAQLAKQSGFTLRHSVVEAHGLCTECGVVEACESHDDCEHDHSIVVKKK HHHHHHHCCCHHHHHHHHHHCCHHHCCHHHHHHCCCCCCCCCCEEEECC >Mature Secondary Structure MNPINQEKLLAQAESLCQQRNVRLTPQRLEVLRLMAQQPGAISAYDLLDLLRVAEPQAKP CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC PTVYRALDFLLEQGFIHRVESANSYVLCHHFEEPTHTSALFICDRCKIVTERPTVGIEEA CHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCEEEECCCCCCHHHH LAQLAKQSGFTLRHSVVEAHGLCTECGVVEACESHDDCEHDHSIVVKKK HHHHHHHCCCHHHHHHHHHHCCHHHCCHHHHHHCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]