| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51594606
Identifier: 51594606
GI number: 51594606
Start: 296306
End: 297166
Strand: Direct
Name: 51594606
Synonym: YPTB0251
Alternate gene names: NA
Gene position: 296306-297166 (Clockwise)
Preceding gene: 51594605
Following gene: 51594607
Centisome position: 6.25
GC content: 46.92
Gene sequence:
>861_bases ATGACGATGACGACCTTCTCTCATCCCTCCCTGATCCCACTGGATGGCGGTATTAACTTTCGTGATCTCGGGGGTAACCT TGCCGCTGATGGCCGGCGGATAAAGCCCGGCTTGTTATTTCGTTCCGGTTCGCTTGATCGCTTGAGTACCAACGATTGTG ATTTTCTCAGTCACAGTAACGTTACCCAAATTATTGATTACCGTGATGCCGATGAAGTACAGGCTAAGCCAGATGTTTTA TGGCCGGGTGCCCACTATCACAATATACCGGCCAACCCGCTCAGTAGTGAGGTGAATGCCAATCTGGAAAAATTGACTAA CGAGACATTAGCCACATTTGATGTCCGTGCCTTTATGTTCGAGCTTTATCACCGCTTACCTTTTAATAGCTTGGCTTATC AGCAATTGGTCAATTTATTGCAAAATTGTGCATCAACGGACCCTGTCGCTAGCAGCGTTGTGCATAGTGGCGATGTGGTA CATGGCGATGTGGTACATAGCGATGTGGTACATAGAGGTATTGTACAGCACTGTGCGGTTGGAAAAGACCGCACGGGTGT AGGTGCTGCGTTGGTACTGTTTGCTTTGGGGGCTGATGAATCTACTGTGCTGGAAGATTATCTGTTGACGGAAACCACCC TGAAGCCTTTTCGTGAGCATATGCTGGCTGAATTGGCACTAAAACTGAATGATCAGGCTCTGGCGCAATTTACATTTGTT CTCTCTGCCAGAGAAGAGTTTATTCAAACTACGCTGCGGAGCATTCATGAGCGTTATGGAAGCAGGGAGCGTTGGTTAAA GCATGAGTTCGGTCTTGGCAGTATTGAGCGTGAAAAACTACAGTCTTATTTTTTAGAGTAA
Upstream 100 bases:
>100_bases GAGGGTTTGTTCTCGGGTCAGTTTACTGGCCCGTTCTTTATTTCATCTGATTATCTGATAAGGTCACAGCTCTTATAACG AACAATAATAAGAGGAAAAT
Downstream 100 bases:
>100_bases CGGGTTATTTTTTATGACATTCGTTTTTTAGCATAATGCGTTACCTCTTGCCTTTTATTTGGTCCAGGCTAAGAGTTGGA GTCGGTACCCCCGTATTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Protein-Tyrosine Phosphatase; Protein Tyrosine Phosphatase; Phosphotyrosine Protein Phosphatase Ptpb; Protein-Tyrosine-Phosphatase; Tyrosine Specific Protein Phosphatase
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTMTTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSNVTQIIDYRDADEVQAKPDVL WPGAHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMFELYHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVV HGDVVHSDVVHRGIVQHCAVGKDRTGVGAALVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQFTFV LSAREEFIQTTLRSIHERYGSRERWLKHEFGLGSIEREKLQSYFLE
Sequences:
>Translated_286_residues MTMTTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSNVTQIIDYRDADEVQAKPDVL WPGAHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMFELYHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVV HGDVVHSDVVHRGIVQHCAVGKDRTGVGAALVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQFTFV LSAREEFIQTTLRSIHERYGSRERWLKHEFGLGSIEREKLQSYFLE >Mature_285_residues TMTTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSNVTQIIDYRDADEVQAKPDVLW PGAHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMFELYHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVVH GDVVHSDVVHRGIVQHCAVGKDRTGVGAALVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQFTFVL SAREEFIQTTLRSIHERYGSRERWLKHEFGLGSIEREKLQSYFLE
Specific function: Unknown
COG id: COG2365
COG function: function code T; Protein tyrosine/serine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31936; Mature: 31805
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSN CCCCCCCCCCEEEECCCCCHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC VTQIIDYRDADEVQAKPDVLWPGAHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMF HHHHHCCCCCHHHCCCCCEECCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHH ELYHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVVHGDVVHSDVVHRGIVQHCAV HHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHC GKDRTGVGAALVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQFTFV CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LSAREEFIQTTLRSIHERYGSRERWLKHEFGLGSIEREKLQSYFLE HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure TMTTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSN CCCCCCCCCEEEECCCCCHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC VTQIIDYRDADEVQAKPDVLWPGAHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMF HHHHHCCCCCHHHCCCCCEECCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHH ELYHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVVHGDVVHSDVVHRGIVQHCAV HHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHC GKDRTGVGAALVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQFTFV CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LSAREEFIQTTLRSIHERYGSRERWLKHEFGLGSIEREKLQSYFLE HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA