| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51594562
Identifier: 51594562
GI number: 51594562
Start: 247936
End: 249135
Strand: Direct
Name: 51594562
Synonym: YPTB0207
Alternate gene names: NA
Gene position: 247936-249135 (Clockwise)
Preceding gene: 51594561
Following gene: 51594564
Centisome position: 5.23
GC content: 39.17
Gene sequence:
>1200_bases ATGAGTGATATAAACGTTACCTCCCCCCATTTCATACCTATGAAAAGTCCTATTACTGCAAGATTAGATAATAGTGATTT GATCGATGAACGGCCTCAGAAGATTAATTTTCTCGGTAATAAATTAAACTCCATAGCCGATGTTAATATTGACTCAAAAA ATAAAAAAATAACAATAAATATTGCTGAGAAGAAATTTAGTAGTGACTATATTCCTGAGGAGTATATCTATATTGCCGTG TGGGATGCTAAAGGAAAAATGGTTTTTCAAAAAAAATTATCAGATGCAGAGATAAAAGAAGAGAAAATAGAACTTCCATT TGAGGTGGGTTATCAACTTGAAATGTACCACCCTATACCCAGCAGACTCGTTAGTTCTCCTGATCTTTATAGTATTATTG ACTCCAATTCTCCATTTACTCTTCTTGTAATGACGCCATTAGGTGTGACAAATCCTAAGATGGAATCTTATCCTACCGAT ATTATCGAGGCGGATTTTATTCATCCAAACTCCGTTTCAGTGGGGGTCAATGCGGATGTTATTGAACCTGCATCTACAGC GGAACCCACAACGTCTACCCCTATCGCTCCTGATATCCCTTCTGCCAGCACCGATCCCATCGTCAGCACCAGTACCCGCA CGGGTATCGATTCGACAACAAAATTGATGGTATCGTTCCAGTTCAAGCTGTTGGGCGTATGTGATTATGATATTGCGACA GTGACCATCGATGAAGAGAGTAAACTGGCGGGTATTAAGATTGTTACTGACACCCCCCATTGTCATTTTGGTGATGAGCT GTATGCCAGTATTAAAGTGACCGATAAACAAGGGCACATCACGTTTGAGGAAAAACTTTATGGCACGAATGCGAATATTT CAAATACCATTATTCCCTTCGAAAAAGGTTATAAATTAGATATCTTCCATGCTGAGCCTAGCCGGTTACGTGTTTCATCC GGTGATAGCGATACTTTAATTCCAGAGTCCAAGCAGAATAGTTTTATCATGACATCAATTGGTATAGAAAATACCAGGCA GGGCAGTGCCGAGGCAATAATATCAGATCAATTCGATACAGAAAAATTGGTTCAAGATATGTCTTCTTTCGGTGATTCTT CCATTGCGCCCGTGGATAATGTCTACGGATACATGGGTGAAAAAAATCACTATCAGAATGTAGTGAGTCACGTTGAATAA
Upstream 100 bases:
>100_bases TAATAAAGACTAATTAGTCTTTCTATATATTCATGAAGATAATGGTATCTCATTGTTTTAATTTAATATTAAAGCAAAAT TTATCTGAATGGAGTTAAAT
Downstream 100 bases:
>100_bases TTAATTATGGCTCTCTTTCCTCTGAATCTCTGAAGAGAAGAAAGAGAAAAAAGAGAGCCATGTTTACGGCGAGTTATTTA TGCTGTTGCTGTTTTTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Viral Enhancin Protein; Metallprotease Enhancin Family
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSDINVTSPHFIPMKSPITARLDNSDLIDERPQKINFLGNKLNSIADVNIDSKNKKITINIAEKKFSSDYIPEEYIYIAV WDAKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMYHPIPSRLVSSPDLYSIIDSNSPFTLLVMTPLGVTNPKMESYPTD IIEADFIHPNSVSVGVNADVIEPASTAEPTTSTPIAPDIPSASTDPIVSTSTRTGIDSTTKLMVSFQFKLLGVCDYDIAT VTIDEESKLAGIKIVTDTPHCHFGDELYASIKVTDKQGHITFEEKLYGTNANISNTIIPFEKGYKLDIFHAEPSRLRVSS GDSDTLIPESKQNSFIMTSIGIENTRQGSAEAIISDQFDTEKLVQDMSSFGDSSIAPVDNVYGYMGEKNHYQNVVSHVE
Sequences:
>Translated_399_residues MSDINVTSPHFIPMKSPITARLDNSDLIDERPQKINFLGNKLNSIADVNIDSKNKKITINIAEKKFSSDYIPEEYIYIAV WDAKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMYHPIPSRLVSSPDLYSIIDSNSPFTLLVMTPLGVTNPKMESYPTD IIEADFIHPNSVSVGVNADVIEPASTAEPTTSTPIAPDIPSASTDPIVSTSTRTGIDSTTKLMVSFQFKLLGVCDYDIAT VTIDEESKLAGIKIVTDTPHCHFGDELYASIKVTDKQGHITFEEKLYGTNANISNTIIPFEKGYKLDIFHAEPSRLRVSS GDSDTLIPESKQNSFIMTSIGIENTRQGSAEAIISDQFDTEKLVQDMSSFGDSSIAPVDNVYGYMGEKNHYQNVVSHVE >Mature_398_residues SDINVTSPHFIPMKSPITARLDNSDLIDERPQKINFLGNKLNSIADVNIDSKNKKITINIAEKKFSSDYIPEEYIYIAVW DAKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMYHPIPSRLVSSPDLYSIIDSNSPFTLLVMTPLGVTNPKMESYPTDI IEADFIHPNSVSVGVNADVIEPASTAEPTTSTPIAPDIPSASTDPIVSTSTRTGIDSTTKLMVSFQFKLLGVCDYDIATV TIDEESKLAGIKIVTDTPHCHFGDELYASIKVTDKQGHITFEEKLYGTNANISNTIIPFEKGYKLDIFHAEPSRLRVSSG DSDTLIPESKQNSFIMTSIGIENTRQGSAEAIISDQFDTEKLVQDMSSFGDSSIAPVDNVYGYMGEKNHYQNVVSHVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44154; Mature: 44023
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDINVTSPHFIPMKSPITARLDNSDLIDERPQKINFLGNKLNSIADVNIDSKNKKITIN CCCCCCCCCCEEECCCCCEEEECCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCEEEEE IAEKKFSSDYIPEEYIYIAVWDAKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMYHPIP EECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHCHHHCCCCHHCCCEEEEECCCH SRLVSSPDLYSIIDSNSPFTLLVMTPLGVTNPKMESYPTDIIEADFIHPNSVSVGVNADV HHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCE IEPASTAEPTTSTPIAPDIPSASTDPIVSTSTRTGIDSTTKLMVSFQFKLLGVCDYDIAT ECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEEEEEEEECCCEEE VTIDEESKLAGIKIVTDTPHCHFGDELYASIKVTDKQGHITFEEKLYGTNANISNTIIPF EEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEHHEEECCCCCCCCEEEEC EKGYKLDIFHAEPSRLRVSSGDSDTLIPESKQNSFIMTSIGIENTRQGSAEAIISDQFDT CCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCH EKLVQDMSSFGDSSIAPVDNVYGYMGEKNHYQNVVSHVE HHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure SDINVTSPHFIPMKSPITARLDNSDLIDERPQKINFLGNKLNSIADVNIDSKNKKITIN CCCCCCCCCEEECCCCCEEEECCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCEEEEE IAEKKFSSDYIPEEYIYIAVWDAKGKMVFQKKLSDAEIKEEKIELPFEVGYQLEMYHPIP EECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHCHHHCCCCHHCCCEEEEECCCH SRLVSSPDLYSIIDSNSPFTLLVMTPLGVTNPKMESYPTDIIEADFIHPNSVSVGVNADV HHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCE IEPASTAEPTTSTPIAPDIPSASTDPIVSTSTRTGIDSTTKLMVSFQFKLLGVCDYDIAT ECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEEEEEEEECCCEEE VTIDEESKLAGIKIVTDTPHCHFGDELYASIKVTDKQGHITFEEKLYGTNANISNTIIPF EEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCEEEHHEEECCCCCCCCEEEEC EKGYKLDIFHAEPSRLRVSSGDSDTLIPESKQNSFIMTSIGIENTRQGSAEAIISDQFDT CCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCH EKLVQDMSSFGDSSIAPVDNVYGYMGEKNHYQNVVSHVE HHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA