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The map label for this gene is rffC

Identifier: 51594530

GI number: 51594530

Start: 208476

End: 209144

Strand: Direct

Name: rffC

Synonym: YPTB0174

Alternate gene names: 51594530

Gene position: 208476-209144 (Clockwise)

Preceding gene: 51594529

Following gene: 51594531

Centisome position: 4.39

GC content: 50.97

Gene sequence:

>669_bases
TTGATTTTTTCCGACTCAGCCCCGCCACTTAACCCGGCTGAGTTGGCTGCTTTTACTCTCGTTCAGGCTAAAGTACCTAC
TCATCGCCTTGATCTTATAGATGCCCTGAGCCAACTTGATTTTCATTTGGTTGAAGGGGAAATTGATCTGTCGCTGGCCG
TGGGTGAAAAAGAAGGTATTGGCACGGAAAATGCTACATCAGAACCCAATATGGGGCCCTACTCGCAACGGGTTGCCACC
GAGGCAGATATTCCGCAGTTGCGCCGTGTTGCTGCCAGTACTTTTGCCTTAAGCCGCTTTCGTGCGCCTTGGTATGACGC
ACAGGACAGTGGGCGATTTTATGCTTTGTGGGTTGAAAAGGCGGTGCTGGGAACCTTTGATCACCAATGTTTATTGGTGC
TCGACTCTACGGATCAACCCGTCGGGTTTGTGACGTTGCGTGACTTGCAAGACGGGAGTGCGCGTATTGGCCTGTTGGCC
GTATTCCCCGGTGCACAGAGTAAAGGTATAGGGTTAAGATTAATGTCGGCGGCGAAGCAGTGGTGCCAGCATCATGGGTT
ACACCGGTTACGGGTAGCCACACAAATGAGCAATATTGCTGCTTTACGTCTCTATATTCGTAGTGGTGCCTCCATTGAGA
GTACCGCGTATTGGTTATGCAGGGGATGA

Upstream 100 bases:

>100_bases
GGTTATGGCAAATATCTGTTGGATCTATTACATGCCCGTCCACGCCAGTATTGAGCCACTGGGCTGGGAAAGTGAATTTT
TCCAGCGCCAAAGTGCAAAA

Downstream 100 bases:

>100_bases
GATGATTCCATTTAACACTCCACCGATAGTGGGCACTGAACTGGGTTATATGCAGGCTGCGATGAGCAGTGGCAAGTTAT
GCGGTGATGGTGGTTTTACC

Product: TDP-fucosamine acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MIFSDSAPPLNPAELAAFTLVQAKVPTHRLDLIDALSQLDFHLVEGEIDLSLAVGEKEGIGTENATSEPNMGPYSQRVAT
EADIPQLRRVAASTFALSRFRAPWYDAQDSGRFYALWVEKAVLGTFDHQCLLVLDSTDQPVGFVTLRDLQDGSARIGLLA
VFPGAQSKGIGLRLMSAAKQWCQHHGLHRLRVATQMSNIAALRLYIRSGASIESTAYWLCRG

Sequences:

>Translated_222_residues
MIFSDSAPPLNPAELAAFTLVQAKVPTHRLDLIDALSQLDFHLVEGEIDLSLAVGEKEGIGTENATSEPNMGPYSQRVAT
EADIPQLRRVAASTFALSRFRAPWYDAQDSGRFYALWVEKAVLGTFDHQCLLVLDSTDQPVGFVTLRDLQDGSARIGLLA
VFPGAQSKGIGLRLMSAAKQWCQHHGLHRLRVATQMSNIAALRLYIRSGASIESTAYWLCRG
>Mature_222_residues
MIFSDSAPPLNPAELAAFTLVQAKVPTHRLDLIDALSQLDFHLVEGEIDLSLAVGEKEGIGTENATSEPNMGPYSQRVAT
EADIPQLRRVAASTFALSRFRAPWYDAQDSGRFYALWVEKAVLGTFDHQCLLVLDSTDQPVGFVTLRDLQDGSARIGLLA
VFPGAQSKGIGLRLMSAAKQWCQHHGLHRLRVATQMSNIAALRLYIRSGASIESTAYWLCRG

Specific function: Transaminase converting thymidine diphosphate(TDP)-4- keto-6-deoxy-D-glucose to TDP-4-amino-4,6-dideoxy-D-galactose, the immediate precursor of the ECA sugar TDP-Fuc4NAc [H]

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI145693203, Length=219, Percent_Identity=47.945205479452, Blast_Score=189, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR012752
- InterPro:   IPR016181
- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 24310; Mature: 24310

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFSDSAPPLNPAELAAFTLVQAKVPTHRLDLIDALSQLDFHLVEGEIDLSLAVGEKEGI
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECEEEEEEEECCCCCC
GTENATSEPNMGPYSQRVATEADIPQLRRVAASTFALSRFRAPWYDAQDSGRFYALWVEK
CCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEH
AVLGTFDHQCLLVLDSTDQPVGFVTLRDLQDGSARIGLLAVFPGAQSKGIGLRLMSAAKQ
HHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHH
WCQHHGLHRLRVATQMSNIAALRLYIRSGASIESTAYWLCRG
HHHHCCCHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECC
>Mature Secondary Structure
MIFSDSAPPLNPAELAAFTLVQAKVPTHRLDLIDALSQLDFHLVEGEIDLSLAVGEKEGI
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECEEEEEEEECCCCCC
GTENATSEPNMGPYSQRVATEADIPQLRRVAASTFALSRFRAPWYDAQDSGRFYALWVEK
CCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEH
AVLGTFDHQCLLVLDSTDQPVGFVTLRDLQDGSARIGLLAVFPGAQSKGIGLRLMSAAKQ
HHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHH
WCQHHGLHRLRVATQMSNIAALRLYIRSGASIESTAYWLCRG
HHHHCCCHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1379743; 9278503; 8366065 [H]