| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is wecC
Identifier: 51594527
GI number: 51594527
Start: 204927
End: 206189
Strand: Direct
Name: wecC
Synonym: YPTB0171
Alternate gene names: 51594527
Gene position: 204927-206189 (Clockwise)
Preceding gene: 51594526
Following gene: 51594528
Centisome position: 4.32
GC content: 49.88
Gene sequence:
>1263_bases ATGAGTTTTGAAACTATTTCTGTTATCGGTCTTGGGTATATTGGTCTGCCGACCGCGGCGGCTTTTGCTTCGCGTAAAAA GAAAGTGATTGGCGTTGACGTCAATGCGCATGCGGTTGAAACCATTAATCGTGGTGCCATCCATATCGTGGAGCCAGATT TAGACAAAGTGGTAAAGATTGCTGTTGAAGGCGGCTACCTGCAAGCGGCGACGAAACCACAGGCAGCGGATGCATTCCTT ATTGCCGTACCAACACCGTTTAAAGGCGATCATGAGCCGGATATGATTTTTGTCGAATCAGCCGCTAAATCCATCGCACC GGTGCTGAAAAAAGGCGATTTGGTCATTTTGGAATCTACCTCCCCGGTAGGTGCTACTGAGCAAATGGCGCAATGGCTGG CTGAGGCTCGCCCTGATTTGAGTTTCCCACAGCAAGCGGGCGAAGCAGCCGATATCAATATTGCATACTGCCCTGAGCGC GTGTTACCGGGCCAGGTTATGGTTGAACTGATCCAGAATGACCGGGTGATTGGTGGCATGACACCAAAATGTTCTGCCCG CGCCAGTGCGTTATATAAAATTTTCTTGGAAGGTGAGTGTGTGGTGACTAACTCACGCACCGCTGAGATGTGCAAACTGA CGGAAAACAGCTTCCGTGACGTTAACATTGCCTTTGCCAACGAGTTATCACTGATTTGTGATGAGCAAGGTATCAATGTG TGGGAGCTGATTCGTCTGGCGAACCGCCATCCACGCGTGAATATCTTACAGCCGGGTCCAGGTGTAGGTGGTCACTGTAT CGCCGTCGATCCATGGTTTATTGTTTCTCAGAATCCACAATTGGCCCGCCTGATCCACACGGCGCGTCTGGTAAACGACG GCAAACCGTTGTGGGTGGTTGATCGCGTTAAAGCCGCTGTTGCTGATTGTCTGGCCGCCAGTGATAAACGCGCTTCTGAA GTGAAAATTGCCTGCTTCGGTCTGGCTTTTAAACCCGATATTGATGACCTGCGTGAAAGCCCAGCAGTGGGTGTTGCCCG CTTGATCGCGGAGTGGCATGTGGGTGAAACACTGGTTGTTGAACCCAATGTTGAGCAATTGCCAAAATCACTGATGGGTC TTGTCACCTTGAAAGATACCGCCACTGCTTTACAACAGGCTGATGTCTTGGTCATGTTGGTGGACCACAAACAATTCAAG GCCATCAAACCTGAAGATATTAAGCAACAGTGGATTGTTGATACCAAAGGAGTATGGCGTTGA
Upstream 100 bases:
>100_bases AGACGGCTTATCATCAAATGACCCGGGCACACAATCCTTACGGTGACGGGTATGCCTGTCAACGCATCCTTAAAGCTTTA AAGAATCATCAGGTGACGCT
Downstream 100 bases:
>100_bases GGCGAATTCTCGTCACAGGCGGGGCCGGTTTTATCGGCTCTGCGGTGGTCAGGCATATTATTGATGGCACCTCAGATAGC GTGGTGGTGGTCGATAAACT
Product: UDP-N-acetyl-D-mannosamine dehydrogenase
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MSFETISVIGLGYIGLPTAAAFASRKKKVIGVDVNAHAVETINRGAIHIVEPDLDKVVKIAVEGGYLQAATKPQAADAFL IAVPTPFKGDHEPDMIFVESAAKSIAPVLKKGDLVILESTSPVGATEQMAQWLAEARPDLSFPQQAGEAADINIAYCPER VLPGQVMVELIQNDRVIGGMTPKCSARASALYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICDEQGINV WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVSQNPQLARLIHTARLVNDGKPLWVVDRVKAAVADCLAASDKRASE VKIACFGLAFKPDIDDLRESPAVGVARLIAEWHVGETLVVEPNVEQLPKSLMGLVTLKDTATALQQADVLVMLVDHKQFK AIKPEDIKQQWIVDTKGVWR
Sequences:
>Translated_420_residues MSFETISVIGLGYIGLPTAAAFASRKKKVIGVDVNAHAVETINRGAIHIVEPDLDKVVKIAVEGGYLQAATKPQAADAFL IAVPTPFKGDHEPDMIFVESAAKSIAPVLKKGDLVILESTSPVGATEQMAQWLAEARPDLSFPQQAGEAADINIAYCPER VLPGQVMVELIQNDRVIGGMTPKCSARASALYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICDEQGINV WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVSQNPQLARLIHTARLVNDGKPLWVVDRVKAAVADCLAASDKRASE VKIACFGLAFKPDIDDLRESPAVGVARLIAEWHVGETLVVEPNVEQLPKSLMGLVTLKDTATALQQADVLVMLVDHKQFK AIKPEDIKQQWIVDTKGVWR >Mature_419_residues SFETISVIGLGYIGLPTAAAFASRKKKVIGVDVNAHAVETINRGAIHIVEPDLDKVVKIAVEGGYLQAATKPQAADAFLI AVPTPFKGDHEPDMIFVESAAKSIAPVLKKGDLVILESTSPVGATEQMAQWLAEARPDLSFPQQAGEAADINIAYCPERV LPGQVMVELIQNDRVIGGMTPKCSARASALYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICDEQGINVW ELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVSQNPQLARLIHTARLVNDGKPLWVVDRVKAAVADCLAASDKRASEV KIACFGLAFKPDIDDLRESPAVGVARLIAEWHVGETLVVEPNVEQLPKSLMGLVTLKDTATALQQADVLVMLVDHKQFKA IKPEDIKQQWIVDTKGVWR
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=451, Percent_Identity=26.1640798226164, Blast_Score=102, Evalue=8e-22, Organism=Homo sapiens, GI296040438, Length=347, Percent_Identity=25.0720461095101, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI296040443, Length=439, Percent_Identity=23.9179954441913, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI48994968, Length=420, Percent_Identity=82.3809523809524, Blast_Score=722, Evalue=0.0, Organism=Escherichia coli, GI1788340, Length=403, Percent_Identity=24.5657568238213, Blast_Score=79, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17560350, Length=404, Percent_Identity=29.9504950495049, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI17136908, Length=456, Percent_Identity=25.6578947368421, Blast_Score=108, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 45611; Mature: 45480
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFETISVIGLGYIGLPTAAAFASRKKKVIGVDVNAHAVETINRGAIHIVEPDLDKVVKI CCCEEEEEEEECCCCCHHHHHHHHCCCEEEEEECCCHHHHHCCCCEEEEECCCHHHEEEE AVEGGYLQAATKPQAADAFLIAVPTPFKGDHEPDMIFVESAAKSIAPVLKKGDLVILEST EECCCEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEECC SPVGATEQMAQWLAEARPDLSFPQQAGEAADINIAYCPERVLPGQVMVELIQNDRVIGGM CCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEECC TPKCSARASALYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICDEQGINV CCCCHHHHHEEEEEEECCEEEEECCCCHHHHHHCCCCCCEEEEEEECCEEEEECCCCCCH WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVSQNPQLARLIHTARLVNDGKPLWVV HHHHHHHCCCCEEEEECCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHCCCCCEEEH DRVKAAVADCLAASDKRASEVKIACFGLAFKPDIDDLRESPAVGVARLIAEWHVGETLVV HHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCHHHHHCCCCHHHHHHHHHHCCCCEEEE EPNVEQLPKSLMGLVTLKDTATALQQADVLVMLVDHKQFKAIKPEDIKQQWIVDTKGVWR CCCHHHHHHHHHHEEEEHHHHHHHHHCCEEEEEECCCHHCCCCCHHHHHHHEECCCCCCC >Mature Secondary Structure SFETISVIGLGYIGLPTAAAFASRKKKVIGVDVNAHAVETINRGAIHIVEPDLDKVVKI CCEEEEEEEECCCCCHHHHHHHHCCCEEEEEECCCHHHHHCCCCEEEEECCCHHHEEEE AVEGGYLQAATKPQAADAFLIAVPTPFKGDHEPDMIFVESAAKSIAPVLKKGDLVILEST EECCCEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEECC SPVGATEQMAQWLAEARPDLSFPQQAGEAADINIAYCPERVLPGQVMVELIQNDRVIGGM CCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEECC TPKCSARASALYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICDEQGINV CCCCHHHHHEEEEEEECCEEEEECCCCHHHHHHCCCCCCEEEEEEECCEEEEECCCCCCH WELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVSQNPQLARLIHTARLVNDGKPLWVV HHHHHHHCCCCEEEEECCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHCCCCCEEEH DRVKAAVADCLAASDKRASEVKIACFGLAFKPDIDDLRESPAVGVARLIAEWHVGETLVV HHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCHHHHHCCCCHHHHHHHHHHCCCCEEEE EPNVEQLPKSLMGLVTLKDTATALQQADVLVMLVDHKQFKAIKPEDIKQQWIVDTKGVWR CCCHHHHHHHHHHEEEEHHHHHHHHHCCEEEEEECCCHHCCCCCHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]