| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51594434
Identifier: 51594434
GI number: 51594434
Start: 88363
End: 89139
Strand: Reverse
Name: 51594434
Synonym: YPTB0076
Alternate gene names: NA
Gene position: 89139-88363 (Counterclockwise)
Preceding gene: 51594435
Following gene: 51594428
Centisome position: 1.88
GC content: 48.91
Gene sequence:
>777_bases ATGAAATATTCTAACGTGATTGTATCGGGCCTGTGTATGAGTATGGTCAGCCTGGCAACGGCAGCACCAACAGAGGTTCC ATCCGACGAGCCAGTGACCCTACGGATCATTTCGTCGATGGCCACTCGACAGTTCTTGACCGAGGTTATCGCGCAATTTG CGCAACAATCAAAATACCAGGTCGAGCTCGAGTCAGTGGGAGGAGTGGATGCCACTAAACGCGTAGAAGCTGGCGAAGCT TTTGACGTGGTGATCCTGTCTGCCAATGCAATCGATAAACTGATTGATTCAGGTAAGATTTTACCCAATAGTCGCATTGA CCTGGTTAAGTCAGGCGTGGCTATCGCGGTGAAAGAAGGGGCACAGATAATGGATGTTAGCAGCGAGGAAACGGTAAAAC AGGCTGTTTTAGCGGCCAATACGATCGCTTACTCAACAGGCCCTAGCGGCGTGTACCTGACTGAGGTTTTCGAGCGCTGG GGCATTGCCGAACAAATCAAAGATCGCATTGTAAAAGTCCCACCAGGAGTCCCTGTCGGTTCTCTGGTAGCCAAGGGTGA AGTTGAACTTGGATTCCAGCAACTCAGTGAACTGCTTCATTTAAAAGGCATTATCATACTTGGGCCTTTGCCCACGGATA TTCAGATAATGACTCATTTTTCAGCAGGGGTCCCCCTTAAAACCAATCAGCAAAAAGCCATTAAGGTATTACTGGACTTC CTTGCATCGCCTGCGGCTACAGAGGCTAAAATCAAGAATGGCATGGAGCCGATCTGA
Upstream 100 bases:
>100_bases TTTATTCAGCTAATTTAAACGTCGCTTAGCCACTGAAGACAAGGTCATCCTGTTTTCGGTGGCCTGTCTTTTGGCGCAAT ATAATAGCGGAGATATATTA
Downstream 100 bases:
>100_bases ACGTAAAATTGAGCTTTCGACCTCAGTTTTGCTATTTACTCGTTTTGCTATGAGCGCTGTTGCAAGCAGCGCGGTAGCGA TAAACGTTCAACACCACAAC
Product: molybdate ABC transporter periplasmic-binding protein
Products: NA
Alternate protein names: PROX Protein; ABC Transporter Periplasmic Molybdate; ABC Transporter
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFLTEVIAQFAQQSKYQVELESVGGVDATKRVEAGEA FDVVILSANAIDKLIDSGKILPNSRIDLVKSGVAIAVKEGAQIMDVSSEETVKQAVLAANTIAYSTGPSGVYLTEVFERW GIAEQIKDRIVKVPPGVPVGSLVAKGEVELGFQQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPLKTNQQKAIKVLLDF LASPAATEAKIKNGMEPI
Sequences:
>Translated_258_residues MKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFLTEVIAQFAQQSKYQVELESVGGVDATKRVEAGEA FDVVILSANAIDKLIDSGKILPNSRIDLVKSGVAIAVKEGAQIMDVSSEETVKQAVLAANTIAYSTGPSGVYLTEVFERW GIAEQIKDRIVKVPPGVPVGSLVAKGEVELGFQQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPLKTNQQKAIKVLLDF LASPAATEAKIKNGMEPI >Mature_258_residues MKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFLTEVIAQFAQQSKYQVELESVGGVDATKRVEAGEA FDVVILSANAIDKLIDSGKILPNSRIDLVKSGVAIAVKEGAQIMDVSSEETVKQAVLAANTIAYSTGPSGVYLTEVFERW GIAEQIKDRIVKVPPGVPVGSLVAKGEVELGFQQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPLKTNQQKAIKVLLDF LASPAATEAKIKNGMEPI
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27487; Mature: 27487
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFLTEVIAQFAQQSKYQ CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEE VELESVGGVDATKRVEAGEAFDVVILSANAIDKLIDSGKILPNSRIDLVKSGVAIAVKEG EEEHHCCCCCCHHHCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCHHHHHCCEEEEEECC AQIMDVSSEETVKQAVLAANTIAYSTGPSGVYLTEVFERWGIAEQIKDRIVKVPPGVPVG CEEEECCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCHHHHHHCEEECCCCCCHH SLVAKGEVELGFQQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPLKTNQQKAIKVLLDF HHHCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH LASPAATEAKIKNGMEPI HCCCCCHHHHHHCCCCCC >Mature Secondary Structure MKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFLTEVIAQFAQQSKYQ CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEE VELESVGGVDATKRVEAGEAFDVVILSANAIDKLIDSGKILPNSRIDLVKSGVAIAVKEG EEEHHCCCCCCHHHCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCHHHHHCCEEEEEECC AQIMDVSSEETVKQAVLAANTIAYSTGPSGVYLTEVFERWGIAEQIKDRIVKVPPGVPVG CEEEECCCHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCHHHHHHCEEECCCCCCHH SLVAKGEVELGFQQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPLKTNQQKAIKVLLDF HHHCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH LASPAATEAKIKNGMEPI HCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA