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The map label for this gene is yibP [H]

Identifier: 161760594

GI number: 161760594

Start: 71140

End: 72510

Strand: Reverse

Name: yibP [H]

Synonym: YPTB0059

Alternate gene names: 161760594

Gene position: 72510-71140 (Counterclockwise)

Preceding gene: 51594418

Following gene: 51594416

Centisome position: 1.53

GC content: 49.96

Gene sequence:

>1371_bases
ATGAAGGATAGAGAGTTATTGGCGAAATCAATAACTACGAAAGATGCCGTCTCTGACGGTAGAGAGTCTCCCTCTCTGCT
GTCAGATAAGTTGAGTCGTCTACCGTGGTCAACACTCTATGCCAGCGTTTTTTGTGCTGGCGTACTGTTATTGCCATTTT
CTGGTCAGGCTGTCGAACCCCCTGTCGCGGCCAAAGCATCAGAGAATAAAAACCAACTCAAAACCCTCCAACAGGATATC
GCTGAAAAAGAAAAAAGTGTTCAGCAACAAAAAAAACAACGCAGTTCATTGCTGGATCAACTAAAACAGCAAGAAAATAC
AATTTCTCAGACCAGCCGCAGCCTGCGCGAGACCCAAGCGACCCTGGCTGAACTGAGTAAAGATATTGCCAGCCTCACGA
CCTCGATTGAAAAACTGCAAAATCAGCAGTCGCAACAGCAAAGTATTCTGTCTAAACAACTTGCAGCGGCGTTTAAACAA
GGCAAACACAGTAGCTTACAACTTATTTTAAGTGGCGAAGAGAGCCAGCGCAGTGAGCGTATTTTGGCTTATTTCAGTTA
CCTGAATGAAGCTCGGCAAAAAGCCATTGAAGAGTTGAAGCAGACACGTACCACGCTGTCTGCAGAGAAAAAAATGCTGG
AGCAAAAACAGAATCAACACAAGGCATTGCTGGATGAACAGAAAGCGCAACAACAGAAGCTGGAACAAGCGCGTATTGCC
CGCCAAAAAACCCTGACATCGCTGGAAGCCTCGCTGGAGAAAGATCAGCAGAGTTTGGCGGAGTTAAAGTTGAACGAAAG
CCGTTTACGTGACCAAATCGCCAAAGCAGAACGGGAAGCCAAAGCTCGGGCTGAACGGGAGGCCAAAGAAGCGGCCCGTG
TGCGTGAACAGGTAAAAGTCAAAGAGCAGCAAGCGAAGAAGACCGGTAGCAGTTATAAACCAAGTGAAAGTGAGCGCTCA
TTGATGGCGCGCACCGGCGGCTTGGGCCGTCCTGGCGGTCAAGCCCTATGGCCCGTTCGTGGTAACGTGTCCCACCGTTT
CGGTGAACCCCTACAAGGTGAACTACGCTGGAAAGGGATGGTTATCACCGCACCTGAAGGCAGCGAAGTCAAAGCCATCG
CCGATGGCCGTGTTTTACTGGCTGACTGGTTACAAGGTTATGGCTTGGTGGTCGTTATCGAGCATGGGAAAGGGGATATG
AGTTTGTATGGCTACAACCAAAGTGCCTTGGTCAATGTTGGCGCTCAGGTTAAAGCGGGCCAGCCTATCGCACTTGTGGG
TACCAGCGGTGGGCAGGGCGAGCCATCGCTCTATTTCGAAATCCGCCGTCAGGGACAAGCCGTTAACCCACAGCCCTGGT
TAGGAAGATAG

Upstream 100 bases:

>100_bases
GCTTTCTGATATCGCACCAACCATGTTGTCACTGATGGAAATGGAAATCCCACAAGAGATGACTGGTAAGCCGCTGTTCA
TCGTGGAATAATCCTTCGTT

Downstream 100 bases:

>100_bases
GGAACAACGTTAGGGAACTCGTATTGCGCTACTTCAACACACGCCAATTTATCATCGTAAGCACGCTATTCATCGCCAGC
ACAGCACAGGCCGGCAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MKDRELLAKSITTKDAVSDGRESPSLLSDKLSRLPWSTLYASVFCAGVLLLPFSGQAVEPPVAAKASENKNQLKTLQQDI
AEKEKSVQQQKKQRSSLLDQLKQQENTISQTSRSLRETQATLAELSKDIASLTTSIEKLQNQQSQQQSILSKQLAAAFKQ
GKHSSLQLILSGEESQRSERILAYFSYLNEARQKAIEELKQTRTTLSAEKKMLEQKQNQHKALLDEQKAQQQKLEQARIA
RQKTLTSLEASLEKDQQSLAELKLNESRLRDQIAKAEREAKARAEREAKEAARVREQVKVKEQQAKKTGSSYKPSESERS
LMARTGGLGRPGGQALWPVRGNVSHRFGEPLQGELRWKGMVITAPEGSEVKAIADGRVLLADWLQGYGLVVVIEHGKGDM
SLYGYNQSALVNVGAQVKAGQPIALVGTSGGQGEPSLYFEIRRQGQAVNPQPWLGR

Sequences:

>Translated_456_residues
MKDRELLAKSITTKDAVSDGRESPSLLSDKLSRLPWSTLYASVFCAGVLLLPFSGQAVEPPVAAKASENKNQLKTLQQDI
AEKEKSVQQQKKQRSSLLDQLKQQENTISQTSRSLRETQATLAELSKDIASLTTSIEKLQNQQSQQQSILSKQLAAAFKQ
GKHSSLQLILSGEESQRSERILAYFSYLNEARQKAIEELKQTRTTLSAEKKMLEQKQNQHKALLDEQKAQQQKLEQARIA
RQKTLTSLEASLEKDQQSLAELKLNESRLRDQIAKAEREAKARAEREAKEAARVREQVKVKEQQAKKTGSSYKPSESERS
LMARTGGLGRPGGQALWPVRGNVSHRFGEPLQGELRWKGMVITAPEGSEVKAIADGRVLLADWLQGYGLVVVIEHGKGDM
SLYGYNQSALVNVGAQVKAGQPIALVGTSGGQGEPSLYFEIRRQGQAVNPQPWLGR
>Mature_456_residues
MKDRELLAKSITTKDAVSDGRESPSLLSDKLSRLPWSTLYASVFCAGVLLLPFSGQAVEPPVAAKASENKNQLKTLQQDI
AEKEKSVQQQKKQRSSLLDQLKQQENTISQTSRSLRETQATLAELSKDIASLTTSIEKLQNQQSQQQSILSKQLAAAFKQ
GKHSSLQLILSGEESQRSERILAYFSYLNEARQKAIEELKQTRTTLSAEKKMLEQKQNQHKALLDEQKAQQQKLEQARIA
RQKTLTSLEASLEKDQQSLAELKLNESRLRDQIAKAEREAKARAEREAKEAARVREQVKVKEQQAKKTGSSYKPSESERS
LMARTGGLGRPGGQALWPVRGNVSHRFGEPLQGELRWKGMVITAPEGSEVKAIADGRVLLADWLQGYGLVVVIEHGKGDM
SLYGYNQSALVNVGAQVKAGQPIALVGTSGGQGEPSLYFEIRRQGQAVNPQPWLGR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=418, Percent_Identity=63.3971291866029, Blast_Score=497, Evalue=1e-142,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=40.3361344537815, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87082174, Length=120, Percent_Identity=35, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI87081989, Length=163, Percent_Identity=28.8343558282209, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 50549; Mature: 50549

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDRELLAKSITTKDAVSDGRESPSLLSDKLSRLPWSTLYASVFCAGVLLLPFSGQAVEP
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
PVAAKASENKNQLKTLQQDIAEKEKSVQQQKKQRSSLLDQLKQQENTISQTSRSLRETQA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLAELSKDIASLTTSIEKLQNQQSQQQSILSKQLAAAFKQGKHSSLQLILSGEESQRSER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH
ILAYFSYLNEARQKAIEELKQTRTTLSAEKKMLEQKQNQHKALLDEQKAQQQKLEQARIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQKTLTSLEASLEKDQQSLAELKLNESRLRDQIAKAEREAKARAEREAKEAARVREQVKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEQQAKKTGSSYKPSESERSLMARTGGLGRPGGQALWPVRGNVSHRFGEPLQGELRWKGM
HHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHCCCCCCCCEEECEE
VITAPEGSEVKAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYNQSALVNVGAQVKAG
EEECCCCCCEEEECCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHEECCCEEECC
QPIALVGTSGGQGEPSLYFEIRRQGQAVNPQPWLGR
CCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKDRELLAKSITTKDAVSDGRESPSLLSDKLSRLPWSTLYASVFCAGVLLLPFSGQAVEP
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
PVAAKASENKNQLKTLQQDIAEKEKSVQQQKKQRSSLLDQLKQQENTISQTSRSLRETQA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLAELSKDIASLTTSIEKLQNQQSQQQSILSKQLAAAFKQGKHSSLQLILSGEESQRSER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH
ILAYFSYLNEARQKAIEELKQTRTTLSAEKKMLEQKQNQHKALLDEQKAQQQKLEQARIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQKTLTSLEASLEKDQQSLAELKLNESRLRDQIAKAEREAKARAEREAKEAARVREQVKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEQQAKKTGSSYKPSESERSLMARTGGLGRPGGQALWPVRGNVSHRFGEPLQGELRWKGM
HHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHCCCCCCCCEEECEE
VITAPEGSEVKAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYNQSALVNVGAQVKAG
EEECCCCCCEEEECCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHEECCCEEECC
QPIALVGTSGGQGEPSLYFEIRRQGQAVNPQPWLGR
CCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]