| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yfbT [H]
Identifier: 161760567
GI number: 161760567
Start: 3069069
End: 3069725
Strand: Reverse
Name: yfbT [H]
Synonym: YPTB2593
Alternate gene names: 161760567
Gene position: 3069725-3069069 (Counterclockwise)
Preceding gene: 51596913
Following gene: 51596911
Centisome position: 64.7
GC content: 52.21
Gene sequence:
>657_bases GTGGAGTGTAAAGGTTTTCTTTTTGATTTAGATGGGACGTTGGTTGATTCACTACCTGTTGTTGAACGTGCCTGGATTGG CTGGGCGCAACGTCGAGGCGTTAATCCATCAAAAGTTCTGGATTTTATTCATGGTAAACAAGCGATTACCTCTTTGCGTC ATTTTATGCCGGGTGCCAGTGAAGCTGAAATTCAGGACGAGTTTCTGGCATTAGAGCAAATTGAAGCCAATGATACGGAG GGGGTAACTGCGCTACCAGGGGCGGTGGCACTGTTGACCCGGTTGAATGAACTGGCTATTCCGTGGGCGATAGTGACTTC AGGTTCGATACCTGTTGCCTCAGCTCGCCGGGCGGCAGGTTGTTTGCCAGAGCCGAAAGTGTTTGTGACCGCCGAATTGG TGAAGCAGGGTAAACCTGCGCCCGATGCCTATTTATTAGGGGCCGAACGTTTAGGCCTTGCCCCTGCGGATTGTATTGTG GTGGAAGATGCCCCCGCCGGGATCCTTTCGGGGCTAGCGGCCGGTTGTCAGGTGATCGCGGTTAATGCACCAACAGATAC CCCAAAACTCGATCAGGTTGATCTGGTGCTTCACTCACTGGAGCAATTGGTGGTAGACGCCACTGCTCATGGTGCGGTGG TTCGGTTACTGCCTTAA
Upstream 100 bases:
>100_bases AGGTCGATGCTGTTCTGGTTCACGATACAAATAATATTGCCCCGCCGATTGATATCCAACGTCAACCGCGAGGGGAGAGA GGCTTTAAGGGGATGTGCTT
Downstream 100 bases:
>100_bases TCTGCATGGCGGCTAACGGTATCCCGTTACAGGTGCTGTCGTAGGGTGATAAGCCAATAGTAGGGTGCCTCGACGGCACC TTTTTTGTATCGTTAAAGAG
Product: phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MECKGFLFDLDGTLVDSLPVVERAWIGWAQRRGVNPSKVLDFIHGKQAITSLRHFMPGASEAEIQDEFLALEQIEANDTE GVTALPGAVALLTRLNELAIPWAIVTSGSIPVASARRAAGCLPEPKVFVTAELVKQGKPAPDAYLLGAERLGLAPADCIV VEDAPAGILSGLAAGCQVIAVNAPTDTPKLDQVDLVLHSLEQLVVDATAHGAVVRLLP
Sequences:
>Translated_218_residues MECKGFLFDLDGTLVDSLPVVERAWIGWAQRRGVNPSKVLDFIHGKQAITSLRHFMPGASEAEIQDEFLALEQIEANDTE GVTALPGAVALLTRLNELAIPWAIVTSGSIPVASARRAAGCLPEPKVFVTAELVKQGKPAPDAYLLGAERLGLAPADCIV VEDAPAGILSGLAAGCQVIAVNAPTDTPKLDQVDLVLHSLEQLVVDATAHGAVVRLLP >Mature_218_residues MECKGFLFDLDGTLVDSLPVVERAWIGWAQRRGVNPSKVLDFIHGKQAITSLRHFMPGASEAEIQDEFLALEQIEANDTE GVTALPGAVALLTRLNELAIPWAIVTSGSIPVASARRAAGCLPEPKVFVTAELVKQGKPAPDAYLLGAERLGLAPADCIV VEDAPAGILSGLAAGCQVIAVNAPTDTPKLDQVDLVLHSLEQLVVDATAHGAVVRLLP
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate glucose 6-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI87082080, Length=214, Percent_Identity=71.9626168224299, Blast_Score=298, Evalue=1e-82, Organism=Escherichia coli, GI1789046, Length=189, Percent_Identity=30.6878306878307, Blast_Score=67, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321834, Length=231, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6321833, Length=231, Percent_Identity=32.034632034632, Blast_Score=93, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6320905, Length=210, Percent_Identity=32.3809523809524, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322136, Length=210, Percent_Identity=30.952380952381, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI20129151, Length=201, Percent_Identity=33.8308457711443, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI17137324, Length=188, Percent_Identity=28.7234042553192, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 - InterPro: IPR023198 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 22954; Mature: 22954
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECKGFLFDLDGTLVDSLPVVERAWIGWAQRRGVNPSKVLDFIHGKQAITSLRHFMPGAS CCCCCEEEECCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC EAEIQDEFLALEQIEANDTEGVTALPGAVALLTRLNELAIPWAIVTSGSIPVASARRAAG CHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHC CLPEPKVFVTAELVKQGKPAPDAYLLGAERLGLAPADCIVVEDAPAGILSGLAAGCQVIA CCCCCCEEEEHHHHHCCCCCCCCEEECHHHCCCCCCCEEEECCCCHHHHHHHHCCCEEEE VNAPTDTPKLDQVDLVLHSLEQLVVDATAHGAVVRLLP EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC >Mature Secondary Structure MECKGFLFDLDGTLVDSLPVVERAWIGWAQRRGVNPSKVLDFIHGKQAITSLRHFMPGAS CCCCCEEEECCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC EAEIQDEFLALEQIEANDTEGVTALPGAVALLTRLNELAIPWAIVTSGSIPVASARRAAG CHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHC CLPEPKVFVTAELVKQGKPAPDAYLLGAERLGLAPADCIVVEDAPAGILSGLAAGCQVIA CCCCCCEEEEHHHHHCCCCCCCCEEECHHHCCCCCCCEEEECCCCHHHHHHHHCCCEEEE VNAPTDTPKLDQVDLVLHSLEQLVVDATAHGAVVRLLP EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]