Definition Desulfotalea psychrophila LSv54, complete genome.
Accession NC_006138
Length 3,523,383

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Identifier: 51245321

GI number:

Start: 1636970

End: 1641892

Strand: Reverse

Name: Not Available

Synonym: DP1469

Alternate gene names: NA

Gene position: NA

Preceding gene: 51245322

Following gene: 51245320

Centisome position: NA

GC content: NA

Gene sequence:

>4923_bases
TTGGCTACAATTAAGGATACTGGTAGGCGCACTTACCATGGATTTAATTTTCGCCTACCAGAAACAACGGCGTACCAGAA
AGGCAAGGTACTCTCGGCCCTTGATGGACGAATTGAACAGCACAGGACATTGTTGCGGTTAAAACAGGAGAAGAGCACAG
ACATGAAACAGATCCCGAATAACAAAATAAATCTCCCGCTTTTTCTCCTCCTACCTCTCCTTATTCTCACAGGGCCCTTA
GTGGCAAGTGCAGGTACATGCGAGGGAGCCGCCTATACAGCATACCCACCATCCATAGCCAACAAAGTCAAGCCTAACAT
CCTATTCATGCTCGATAATTCAGGGAGCATGAAGCAACCAATGTATAGCCAGAGTGGCTGGAACTGCAAATCATTCCCGT
CAGACTATGACAGTACAAAAGAGTATTACGGTATTTTTGAAAGTACGGCAAATTACAATTACGACCCCAAGGTTAGCATA
AACCCAGATGGATTTAATGGCACTCCCTACGATGTAGCCGTTGCCCTATCAGCCACGGGAGCCTTTGTACCAAGCACATG
TTCCTCTCAAACAGACAAAAACTGCTGGAGCGGGAACTTTCTCAACTGGATCGTCACCAGACGTATGGATGCAGCCAGAA
AGGTTCTCGTTGGAGGCAAGACAGAGAGCAGAAGCAGCTACCCATATCTAAACATAACAGGCAATTCAACCCTATACTGG
AAAATTGTGGGAAACAATGAGCCAATTGACAGAGAAATTTGCCGAAATGCCCCAGCAAATTCAATTGACTACAGCCCACT
TTCTGCGGGAAGCCCCATAAGAGTCAACAGCCCTGCCTATGGCGGTTCAAGTAAAACTACCTACGACCCCTATGCAAAGA
TGACGGCAACGGGAATAAGCACAAAATACTCCAAGACCATCACCGATAACATTGGTGATATCATTGGTGAATTTAGCTCC
ATTGAGGACCTTGATGAGACATGGAAAAAAATCACCCTGAGCAAAAATTATAGCAATCCCGTTATTGTTGCCGGCCCCCT
CGATTCAACCGCTAATCGCCCTGCGGTAATCAGAATAAAGGAGATCAAAAATTCTTCTTTTAAAATACGGGCAGAGCAGT
GGGAGTATCTCAACGGAACCCTGCCTCAACGAAATGCCTCCTACCTGGTCATCGAGGCAGGGACGCACACCCTGCTTGGC
GGGGGAAAAATTATGGCAGGAAGCACAAAAATCAACACAAGCTATGTAAACAGTCGCTCCGCGTGGAAAAATGTGTCTCT
GGCTTCAGGTGATTTTTCTTCGACTCCCGTAGTAATCACCGCAATCACCTCAGACACAGACCATCAAACCGTCACCACCC
GCCTTAACGATATATCAACAGCCGACTTTGATATCATTTTGCAGGAGGAAGAATTAGAATGGAAGGCGAGCCGCCGAACT
CATGCAACCGAAACAGTGGACTATGTGGCCCTGGAGAAAGGACAATATAACTTCACGGATACAGTTCTAGAAGTGGGCAC
CCAGAGTCTTTCCAACAGCGCCTCTATAACTTTTGCCACGAGCAAAGCCACCAGTGCCTTTCTAGCCACAGCCTTAACCT
TTAACGGGCCCGATACAGTGGCCGTAGCCTTTAGTAATTTAGAGCAGGATTCAGTGCAAATCTCCCTGCAGGAAGAGGGT
TCAAATGATACGGAGGTTCGCCATACAACAGAGGCTGTCGGCTACCTCGCCCTCTCCCCAAGAACAAACTATAATATTGC
CCTATTGACAGATCAGGTACCCAAAGGACTCCTTCACGATATAAAGGATGATGTCCGTCAGGGCCTCAGTTACTACAAGT
ACAATCTCACCACCAACAATATATACAATTCATGGTGGCACGGTGGAACCATGCGCCTGCGCATCCCGACCAACCCCTTT
GTCAAAAAAAGTTCAGACACCAACTTTCGCACAATCGATACCCCCATAGATTCAGACATAGAAATTCTGGTGGATGCAGT
CGAACACTATCCACTGATCTGGGGAACAACCCCCCTTGCTGAAAATTTCTATGAGGTCATTCGTTATTTCCAGCAAAAAG
GCCCCTATTACAACTCCAGCGTCAACAGCGCAGGAGACGTGGCAAGCTTTTTAACAGAAAAAGCCTGGGACCCCTACTAT
TTCAAAGAACTGGACGCCATGATACGTTGCGCTAACTCATCTGTTATTATCTTCACCGATGGGGGTTCATATACCGATAG
CTACGTGCCACCTTTTAATGACGAGGAATTTAACGAATCAAGCGCCTCCCAGGCGGCTTCAGCATATAGTGACGGAAGCA
ACTACACAAACGACTACGATGGGAACATCGTAACAGGCGAGGGCATTAATACGAGGAACACCGATAATAGTTACAAAAAT
AACCTCGATGATCTGGCCCTCTGGGCCAACCTTAACAGAAAGGGGCAGGCCCTGACTGAAGCACTCTCTAACAGTCGGGA
TCTCCGCGATGATCTTAAGGGAGAGCAGTATCTTACCACCTATACCGTGGGCTTCGGAATTTCTGCAAACTCCGCCGAAG
AGAGACTCCTCCAGGATACCGCCGCCCATGGCCAAGGGACCTATTCTCTAGCAGAGGATGGGCAACAGCTCAAAGATGTT
CTGAAGGGAACCATCAACAGCATCCTCGACAAGACCGCATCGGGCACAGGCGTATCTATTCTCTCAGGAAATAAATCTAC
AGGGGGTACCCTCAACCAGAGCCTCTTTTTCCCCACTAAAGAGTTCCAAGATAACAAGAAGTACCAAGTAAACTGGACAG
GTATACTCCATACCTACTGGTACTCCAGCCAAAACGATATTGCCTATATGCAGGAAGACAATGTGGACAGGTTTTTTCGC
AATAAATTTACAGACCATATTATTGAAATTGTGCCAAATCCCAATACAGGGGGACTCTCCATCCCCTACTATGCGGTAGA
GGCCGATGGAAGTAAGGGAGCCCGCTTAGGCGATCATGCCAAAATCGGAGATATTGCCAAGATATGGGATGGCGGACAAA
TGTTAAACGATCGAGAGGTTGAGTCTGCCCCTGACCTCATCGCTGATCCAGCCCCAGGTCTTGACACAGCGAGACGGGTC
ATATGGGGAGTAGATGAAACGGACAGTATACAAGAGTTCACCACAGATAATGTCAACAGCTTCGACTCTCTTTTTGGAGG
CAGCGGCTTTGATCCCTGCCTTGGTGGAACAGCTGCAGAGAGGGCGGTAAACACTATCTCCTATACCCGTGGGGCAGGAG
ATGATTTCACTACCAATGGCGGAGGAGAGTGCAGATCCAGGGCAACAGACGCTGACACCACCGGTGGAAAAAACAGATGG
AAGCTGGGCGATATTATCCATTCAACCCCCAAGGTTCTTAACTACGGGGACAACTCCCTGATCTTCACCGGGGCCAACGA
CGGTATGCTCCATGTCTTTAACGGGGGCAAGATAGAGAGGGGGGGCCTTAGCGGTGATCAAGTGGCTACGCTTATTAATA
AAAAAGGCGACGACGGCAACAACCTCGTAGGTAAAGAGGTCTGGTCTTTCATCCCCAAAAACAGCATGCCCTATCTGAAA
TACCTTGCCGACCCGGACTATCAGCATCTCTATGCGATTGACGGCGCACCCTACTTCGTCCAGCACGGGGACAAGACAAT
TCTTATCATGGGAATGCGTTTTGGCGGGGCAACGGGCTCTACAGGTGATAAGGCTATCTCGCCTGAAACTGCCGGCAAAG
GCCTGTCCTCATACTTTGCTCTTAATATCACCGATCCCTATGCCCCCAAATTCCTCTGGGAATTCACCGATCCAGATCTT
GGTTTTGCCTACTCCGGCCCCGCTGTTATCAGCAGAAAACAAAAAGCTGGCAACAGCCTCAAACAAAAATACGTAGTCTT
TGTCTCCGGCCCCACAGACTACCAGGGCCAAGTACAGCAGAATTTAAAGGTCTTCATCCTCACCCTTGATGATGATTTCA
AAAAAACCGCGGTTAATACAATAGCACCCAAAAACGTGCAAAAAAATTCTTTCGGCGGCAGGCTTTACAACAACGGCATG
GATATCGACAGTGATGGCTACACCGACCTTATCCTTTATGGGGTCAATGAAAAAAATGGTGCACAAGGCCAGCTCCGGGC
TATTGCCCCCACCGATCAGGCAGTAAAAAAATGGACGGAAAAGAACATCCTCAACTCCAGCCAACCGGTTACCAGCGCAG
TTGCCTTCGGCACCTGCTTTGATGACCCCTTTGTCTATTTCGGTACGGGCAAATGGTTTTTCAAGAAGGACGACCCAGAT
GGCAAGACCAATAACCTCTATGGCGTTAACCTCCAAGAGTGTAGGGATAATCTAGCTAAGGGTGAGGATTGCCTAAAAAG
TGTCGGCATCAACTCAATCCACAACACCAGTGGGACCTGTGATGTCTCCGATGCCAAACGCAACAGCAACTATGCATGGA
GGCTGGATAAGGGTCTGGCAGAATATGGCGCCGATGCAGACGACCCTGACACCATCTACATGAAGGAACGTGTTCTCACC
GACCCCACAGTAAGCAATTTAAATATCACCTTTTTCACCACCACCCAACCGACAGATGATATATGCTCCTTTGGTGGACG
GACCAGAATGTGGGCCCTGAACTGCATGACAGGAGATAGCATCAGCACCGGTTGCGAGGAGAACACAGAAGGTCAGGCCT
ATAATCTTCCAGCGGAAATCTTCCACATAATTCTGCCCCTGAATGCCGGCGACCTCAACCTACTCAATCAGGATAGTTTC
GACCAGGATGGCAATAGGGCAACTTCTTGGATAATGGGTACGCCACCAGAAAATTCCCCCTTTATCTTACCTGGTAATGG
GATTACACCCAAAGGAGAGCCCCTCTTATGGCAAGAACGCTAA

Upstream 100 bases:

>100_bases
CTCCCCAACCACCACAGTCCCCACACGCAGCAGATCATACCTACCTCTCACAAAAGCTTCCTGCCACAGATGCATAAAAA
ATTGTACTCTCCGATAAACT

Downstream 100 bases:

>100_bases
GCAGAAACAGGGAGAGGGGTTTTACCCTGCTGGAACTGATGATAGTCATTGTCCTGGTGGGCATAATGGCAACCTTCTCC
CTTGCCAGTTACCAAAAGAT

Product: fimbrial biogenesis protein PilY1

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1640_residues
MATIKDTGRRTYHGFNFRLPETTAYQKGKVLSALDGRIEQHRTLLRLKQEKSTDMKQIPNNKINLPLFLLLPLLILTGPL
VASAGTCEGAAYTAYPPSIANKVKPNILFMLDNSGSMKQPMYSQSGWNCKSFPSDYDSTKEYYGIFESTANYNYDPKVSI
NPDGFNGTPYDVAVALSATGAFVPSTCSSQTDKNCWSGNFLNWIVTRRMDAARKVLVGGKTESRSSYPYLNITGNSTLYW
KIVGNNEPIDREICRNAPANSIDYSPLSAGSPIRVNSPAYGGSSKTTYDPYAKMTATGISTKYSKTITDNIGDIIGEFSS
IEDLDETWKKITLSKNYSNPVIVAGPLDSTANRPAVIRIKEIKNSSFKIRAEQWEYLNGTLPQRNASYLVIEAGTHTLLG
GGKIMAGSTKINTSYVNSRSAWKNVSLASGDFSSTPVVITAITSDTDHQTVTTRLNDISTADFDIILQEEELEWKASRRT
HATETVDYVALEKGQYNFTDTVLEVGTQSLSNSASITFATSKATSAFLATALTFNGPDTVAVAFSNLEQDSVQISLQEEG
SNDTEVRHTTEAVGYLALSPRTNYNIALLTDQVPKGLLHDIKDDVRQGLSYYKYNLTTNNIYNSWWHGGTMRLRIPTNPF
VKKSSDTNFRTIDTPIDSDIEILVDAVEHYPLIWGTTPLAENFYEVIRYFQQKGPYYNSSVNSAGDVASFLTEKAWDPYY
FKELDAMIRCANSSVIIFTDGGSYTDSYVPPFNDEEFNESSASQAASAYSDGSNYTNDYDGNIVTGEGINTRNTDNSYKN
NLDDLALWANLNRKGQALTEALSNSRDLRDDLKGEQYLTTYTVGFGISANSAEERLLQDTAAHGQGTYSLAEDGQQLKDV
LKGTINSILDKTASGTGVSILSGNKSTGGTLNQSLFFPTKEFQDNKKYQVNWTGILHTYWYSSQNDIAYMQEDNVDRFFR
NKFTDHIIEIVPNPNTGGLSIPYYAVEADGSKGARLGDHAKIGDIAKIWDGGQMLNDREVESAPDLIADPAPGLDTARRV
IWGVDETDSIQEFTTDNVNSFDSLFGGSGFDPCLGGTAAERAVNTISYTRGAGDDFTTNGGGECRSRATDADTTGGKNRW
KLGDIIHSTPKVLNYGDNSLIFTGANDGMLHVFNGGKIERGGLSGDQVATLINKKGDDGNNLVGKEVWSFIPKNSMPYLK
YLADPDYQHLYAIDGAPYFVQHGDKTILIMGMRFGGATGSTGDKAISPETAGKGLSSYFALNITDPYAPKFLWEFTDPDL
GFAYSGPAVISRKQKAGNSLKQKYVVFVSGPTDYQGQVQQNLKVFILTLDDDFKKTAVNTIAPKNVQKNSFGGRLYNNGM
DIDSDGYTDLILYGVNEKNGAQGQLRAIAPTDQAVKKWTEKNILNSSQPVTSAVAFGTCFDDPFVYFGTGKWFFKKDDPD
GKTNNLYGVNLQECRDNLAKGEDCLKSVGINSIHNTSGTCDVSDAKRNSNYAWRLDKGLAEYGADADDPDTIYMKERVLT
DPTVSNLNITFFTTTQPTDDICSFGGRTRMWALNCMTGDSISTGCEENTEGQAYNLPAEIFHIILPLNAGDLNLLNQDSF
DQDGNRATSWIMGTPPENSPFILPGNGITPKGEPLLWQER

Sequences:
NA

Specific function: NA

COG id: COG3419

COG function: function code NU; Tfp pilus assembly protein, tip-associated adhesin PilY1

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA