Definition Desulfotalea psychrophila LSv54, complete genome.
Accession NC_006138
Length 3,523,383

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Identifier: 51244692

GI number:

Start: 942823

End: 945462

Strand: Reverse

Name: Not Available

Synonym: DP0840

Alternate gene names: NA

Gene position: NA

Preceding gene: 51244693

Following gene: 51244691

Centisome position: NA

GC content: NA

Gene sequence:

>2640_bases
ATGCCAAAATTAAAAATAACCCCGATGATGCAGCAGTACTTTAAGCTCAAAGAACAACATCCCCATACCATCCTCTTTTA
CCGAATGGGAGATTTTTACGAGATGTTCTTTGAGGACGCCATCACCGCCTCCAAGATTCTTGGTATCACCCTCACCTCCC
GCAATAAGAAATCGGACAGTGCTCAAATACCCATGTGCGGAATCCCCTACCATGCCCTGCAGGGATATCTGGCAAAGATG
GTAGAGGCGGGCAAGCGAGTAGCAATCTGTGAACAGGTGGAGGATCCCAGTACAGCCCAAGGTATTGTCAAACGAGAGGT
GGTGCAGATAGTCACTCCCGGAGTGGTCACAGACAATCAACTCCTCGATGCCAAGAGCAATAACTTTGTCACGGCCATTA
GCAGGGGAAAAAACAACCGCTATGGTCTCTCCTTTCTTGATATTACCACCGGTGAGTTCATCGTTGCCGATTTTGCCGGG
AGCGATGGTGAGGCAGATATCCTCGACCAACTGACCCGCCTCACCCCCACAGAACTGCTCGTCTCAGAAGAGGAGCTAGA
GGACTTTGCCGAGACCATCGATCTTGCCACCACCCTCATCCCCGGCCTCTGTATAACCCCGCGCCCCCACCACCTCTTTG
ACTTTGACCAATCGCATGAAAAGCTGCTTGAACATTTCGCCGTCATCAGTCTGGATGGATTTGGATGTGAGACCCTTGTC
GAGGGACAGATCGCCGCGGCCATACTCCTCGACTATATTGAGGAGACCCAAAAATCTGCCATCCACCATATAGAGAAGCT
GAGCCGCCTGGAACTCGATGCCATCCTGCAAATAGATGACTCTTCGCGGCGTAACCTTGAACTTACCCAGACAATTGTCG
GTGGCAACCGAAGCGGTTCCCTGCTCTCCGTCCTTGATCTGACCACAACGCCCATGGGGGCCAGATTTCTCAAACAGGCC
ATCCTCTTTCCCCTTCAGGACAGGGCAAGAATCCTCCGCCGCCTCAACGCAGTGGGCTATTTTTTTAACAACTCAGAGGC
ACGTCACCAGATCAGAGAGTTGCTCGATCAGGTCTATGATATAGAACGACTCAACAGCAGGATCACCCTGGGCTCGGCCA
ATGGCCGCGATATGCTGGCCATGAAACAGTCTCTGGCCCGCCTGCCTGAAATGCTGACAGAGCTACGAAAATGCGATACC
GATGAGCTGATAGAGATCGAGCAGACACTTGATACTCTGGAAGACCTGCACCAACTCTTGGATAAAAGCATCCACCCAGA
CCCACCGACAAATATACGAGAGGGAAACCTCATTCGGGAAGGTTATAATGCCGAGCTTGATGAGATCATTGTTCTCCTCC
GGGATGGGAAGAAACTCATTCTTGATCTGGAGGCCAAAGAGAGGGAACGAACGGGGATTGCCAAGCTCAAGGTGAGTTAC
AACAGGGTCTTTGGCTATTTCATCGAGGTGAGCAGGGCCCAGAGTTCTCGGGTACCGGAACACTATATTCGTAAGCAGAC
CCTGGTCAATGCCGAGAGATTTATCACCCCTGAACTGAAGGAGTTTGAAACCAAGGTCCTGGGCGCCGAAGATCGCAGAC
TAGAACTGGAGTATCAGCTCTTTGCCACTGTCCGAAATGAGCTTGCCAGCCATTCCAGCAGGTTTCTGGCCACAGCTCAC
CAGTTGGCCCTTCTTGATTTTTATGCCTCGGCCGCCGAAGTATCACAGCAGTACAACTATCACCGACCCGAGATCAGAGA
CGATGGCAGCCTGGAGATACGAGAGGGACGACACCCCGTTATCGAGAGATCACTACCGGCAGGAAAGTTCGTCCCCAACG
ACGTCTATCTTGATCAGGCTGAAAATGAAATTCTGGTTATCACCGGCCCGAATATGGCCGGTAAATCCACGGTACTGAGA
CAAACGGCCCTCATTGTCCTCATGGCCCAGATGGGCTACTATGTACCCGCAGATTCCGCCCGAATCGGGGTTGTTGACCG
AATATTTACCCGGGTCGGGGCAATGGATGACCTACGCAGGGGCCAATCCACCTTTATGGTGGAGATGAGTGAAACCGCCA
ATATTCTCAACAATGCCACCCCGCGCAGTCTTGTTATCCTCGATGAGATCGGTCGGGGTACATCCACCTACGATGGTCTC
TCCATCGCCTGGGCTGTAACAGAACACCTGGTGCAAAAAGACGGTATCGGAGTCAAGACCATGTTCGCCACCCACTACCA
CGAGCTCACCGATCTGGCCCGCAGATATGCACGGATACAGAACTACTCCATCGCTGTACGGGAGTGGCAGAAGAGCGTTA
TCTTCCTCCATAAGCTGATAAAGGGTGGTACCAGCCGCAGTTATGGTATTCAGGTGGCGGCTCTGGCAGGCGTCCCCGCC
CAGGTGGTGGAACGGGCCCATGAAATACTGCACAGCATTGAATCCGGAGATTTTCTAGCAGGAGAAAAGGTAGGAGGGCA
GCCTCAGAAGGAGCTGAGCGAGCACAAGCCCCACCAGCCCTCCCTCTTTGCCCCTCCGACCGACGAGATACGGACAAAGA
TCAGGGAAATGGATTTAGACGAGCTGACACCCAGACAGGCACTTGATGCCCTCTACGCCCTAAAGGAGATGACCGTCTAG

Upstream 100 bases:

>100_bases
GCCGAGGTAAGGACAATACCCCAGCATATCGAAGACACATTTAATATCCTTCTACCAGAATTTCAAAAAATAGAACAAAC
CCAAGAAATTGCCTAAGACT

Downstream 100 bases:

>100_bases
TGCATAGTAAGGCTTAAATGCTCGCTATATCTTACGAGTATTCGTCTCATTTTTTCTCTGAGAGCGAGGCCCCCAATTTT
ATTAAATGGCACCGATGTTT

Product: DNA mismatch repair protein MutS

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>879_residues
MPKLKITPMMQQYFKLKEQHPHTILFYRMGDFYEMFFEDAITASKILGITLTSRNKKSDSAQIPMCGIPYHALQGYLAKM
VEAGKRVAICEQVEDPSTAQGIVKREVVQIVTPGVVTDNQLLDAKSNNFVTAISRGKNNRYGLSFLDITTGEFIVADFAG
SDGEADILDQLTRLTPTELLVSEEELEDFAETIDLATTLIPGLCITPRPHHLFDFDQSHEKLLEHFAVISLDGFGCETLV
EGQIAAAILLDYIEETQKSAIHHIEKLSRLELDAILQIDDSSRRNLELTQTIVGGNRSGSLLSVLDLTTTPMGARFLKQA
ILFPLQDRARILRRLNAVGYFFNNSEARHQIRELLDQVYDIERLNSRITLGSANGRDMLAMKQSLARLPEMLTELRKCDT
DELIEIEQTLDTLEDLHQLLDKSIHPDPPTNIREGNLIREGYNAELDEIIVLLRDGKKLILDLEAKERERTGIAKLKVSY
NRVFGYFIEVSRAQSSRVPEHYIRKQTLVNAERFITPELKEFETKVLGAEDRRLELEYQLFATVRNELASHSSRFLATAH
QLALLDFYASAAEVSQQYNYHRPEIRDDGSLEIREGRHPVIERSLPAGKFVPNDVYLDQAENEILVITGPNMAGKSTVLR
QTALIVLMAQMGYYVPADSARIGVVDRIFTRVGAMDDLRRGQSTFMVEMSETANILNNATPRSLVILDEIGRGTSTYDGL
SIAWAVTEHLVQKDGIGVKTMFATHYHELTDLARRYARIQNYSIAVREWQKSVIFLHKLIKGGTSRSYGIQVAALAGVPA
QVVERAHEILHSIESGDFLAGEKVGGQPQKELSEHKPHQPSLFAPPTDEIRTKIREMDLDELTPRQALDALYALKEMTV

Sequences:
NA

Specific function: NA

COG id: COG0249

COG function: function code L; Mismatch repair ATPase (MutS family)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA