Definition Desulfotalea psychrophila LSv54, complete genome.
Accession NC_006138
Length 3,523,383

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Identifier: 51244221

GI number:

Start: 397397

End: 399190

Strand: Reverse

Name: Not Available

Synonym: DP0369

Alternate gene names: NA

Gene position: NA

Preceding gene: 51244222

Following gene: 51244220

Centisome position: NA

GC content: NA

Gene sequence:

>1794_bases
ATGCGCATGAAAACACTCCAGCAACGGACAGCGATCTTAGTTTTGTTGCCAACATTTTTGTTACTCATAGGCATGGGTTG
GGGTGGTTACATATTTACCCGGCAGAGCCTGATGACGCTGTGGAGTGAAACAGCAATAGCCAATTTACAGAGGGCAGCCC
ATCTCATAGATATGCGAATTTCTCAGCCAAAGAGCCTGCTTTGGGCCCTTGAACATAGCTCAAGAAGTTCGACCTTTCAA
TTCACCCTTGATCAGTTAAGGGAGTTAGAGGGTGTCGATAATGTCAGGGTTGAGGGGGAGAGTGTTTTTGCTCGTCATAG
GGGGCCTTCACGCATGGGTCTTATGGGGGGGATGGACCGGAGTGGTGAACTCTTGGACTTTGCAGATCCCGTTTATCGCT
GGGACTTAGCACCTTCAACTATTTCCATCATCATGGATTTTTCCAAACCGGAAGGGGAAAAGCTTGGAAATATTCGAGTA
GACATTGGTATTACAGATTTGATGAGACGGTTGAAGGAGATGGATCGATGGGTAAGTAATAGTGTTTTTCTTATTGATGG
GCAAGGGAATGTGGTTGCTCACTCCGGCTCAATGAGTCAGTCCCCTGATATTGTGGCTAATAGGCGTTTTGGCAGTGGTA
AGCTGCTTGAAAGGGAAACATTTTCTCTGCTTCAGCAGGAACTCTATGGCACCGTTTTTGGCGAGGGGAATCCGCCGAAA
GAAATTGCCGGTTTTTATCAGTTGAGTGACTTACCCCTCTCTCTGGTTGTTATTGCTCCAGGGGAAGAAATGCTCCAGCC
TGTTGTCAGATTCAGTTTTTTTTATATTTTAGCATTTACCCTCTCTCTTTTGCTTATTCTTGCCTTTATCAGATCTGCAA
CCGCTCAAATAACCGATGCCGTTAAGAGTTTGTCTGGAGCTGCCGAGAATCTGGCTAATGGTGTTTTTGGAGAGGTCTTG
CCGGTTAAATCCGATGATGAGATCGGTGAGCTCACTAAAAATTTCAATAAGATGACTCGCCAGTTGCGACAGGGTTTAGA
GTTGCAAAAAGCCATGGAAATTGCGCGGGAAGTCCAGCAGACCCTTCTGCCAGACTCCCGATACAGCGATGAGGCTCTGA
CCATTTTTGCTTCAACTCATTACTGTAATGAAACCGGTGGAGATTTTTATGATCTGATTTTTTTCGATGAGGATGGCACA
AGGGTCGGGGCAATAGTAGGGGATGTCGTAGGTCATGGTATAGGGGCGGCATTACTGATGGCAACTATCCGCGCTATGTT
AAGAACCAGAAGTGAGCAATCGGGGCGCCTGGATGAAATTATGAATGATGTAAACCGGGTACTGTGCCGTGATACGGTGG
CATCATCAAACTTCGTGACCCTGTTCTATCTCATTGTCGACAAGAACCTCGGCGAGATTAGCTGGGTCAGGGCCGGGCAT
GATCCAGCCTGGCTCTACACCCCTGAGAGTGATATCTTTGCAGAGTTGAAGGGGGCCGGTATCGCCATGGGAGTGGCAGA
ATCCTTTCGCTATCACTGTAATACCATAGATATGCTCCCGCAAAAACAGCTGCTTGTTATTGGCAGTGATGGTGCTTGGG
AGGCCCAGAATGCCCTTGGCGAAATGTTTGGTAAGGATCGGGTGAAAGATGTTTTATCGGCCCACAAGGATGAGAGCCCT
GAGGAAATTACAGAGGCAATAAACGGTGAAATAGGGCTGTTTATGGATGGGATAGCCCCTCAAGATGACATCACCTTTAT
TGTGATGAGTTTAACGCGAAGTGTTGATCTTTGA

Upstream 100 bases:

>100_bases
AAATGTAGTGAGCTCTTCCCTGCTCGAAAAATGGGTGGGGACTATCCCCTCCTCACCCCCTCCCCATCTGTTTGAGACTT
CCTTTTAAGAGAGGGCAAAT

Downstream 100 bases:

>100_bases
GGGAAAGGTGAGAAACAATGTTTTTCAAAATCAATGCCTTATACGAAGTCCTGTTTCGTGGGGCAGAGATATTGTCAAGC
TGAACTGCTTTTTATGACGG

Product: sigma factor SigB regulation protein (RsbU)

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>597_residues
MRMKTLQQRTAILVLLPTFLLLIGMGWGGYIFTRQSLMTLWSETAIANLQRAAHLIDMRISQPKSLLWALEHSSRSSTFQ
FTLDQLRELEGVDNVRVEGESVFARHRGPSRMGLMGGMDRSGELLDFADPVYRWDLAPSTISIIMDFSKPEGEKLGNIRV
DIGITDLMRRLKEMDRWVSNSVFLIDGQGNVVAHSGSMSQSPDIVANRRFGSGKLLERETFSLLQQELYGTVFGEGNPPK
EIAGFYQLSDLPLSLVVIAPGEEMLQPVVRFSFFYILAFTLSLLLILAFIRSATAQITDAVKSLSGAAENLANGVFGEVL
PVKSDDEIGELTKNFNKMTRQLRQGLELQKAMEIAREVQQTLLPDSRYSDEALTIFASTHYCNETGGDFYDLIFFDEDGT
RVGAIVGDVVGHGIGAALLMATIRAMLRTRSEQSGRLDEIMNDVNRVLCRDTVASSNFVTLFYLIVDKNLGEISWVRAGH
DPAWLYTPESDIFAELKGAGIAMGVAESFRYHCNTIDMLPQKQLLVIGSDGAWEAQNALGEMFGKDRVKDVLSAHKDESP
EEITEAINGEIGLFMDGIAPQDDITFIVMSLTRSVDL

Sequences:
NA

Specific function: NA

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA