| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is 50843785
Identifier: 50843785
GI number: 50843785
Start: 2554307
End: 2554750
Strand: Direct
Name: 50843785
Synonym: PPA2372
Alternate gene names: NA
Gene position: 2554307-2554750 (Clockwise)
Preceding gene: 50843784
Following gene: NA
Centisome position: 99.77
GC content: 50.23
Gene sequence:
>444_bases TTGCTGATGATTCTCAACGGCACACCGTCATATGCCTTGACATCACACACGTCCTTTGACGTCACAGGAATACAACAGCT CCCGCGCCACGAGCAATCATTATCACGTCGCCGTTATCACGTCCGATATCACGTCGCCGCACTCACACAACGTGCGAGCT CAACAATCTCAAACGTTAACAGTACTTGCGTACACACAGGATTTCGCCAACTCTACCCGCCTCCGCCAGCACAGAAATTC ACAGCGACGGACATCCCTAGTCTACGAAACAACCTCATTACCGACCCTTCACACCATGTACCCACATGCTTCAGGCCTAG TCAGACCGAACTTTCACATGACCCGGTCAGCCCCAACTTCACGTTCCACGTGAAACACATCTTCATCGATTTCTCGTTTT GTCGACATATAGTCCAATATCTATATCCTCCCGTTCAACCGTGA
Upstream 100 bases:
>100_bases TCACTGTGGCGGCTCAGTAGGGTCGGTGGGTAAAGCTGGCGGAGGTTCAACGAGTTAGCTCACACGAATCAACGGGTCTA AGGGCAGTCTCTACTGGGAT
Downstream 100 bases:
>100_bases CACAGCTCCGAAACCACACTTGCCCAACACATCTCATCCTCGAGGCAACTCACCCAACAGCGGGAGAAGGCAAACATAGG GGTAGGAGACACACAGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MLMILNGTPSYALTSHTSFDVTGIQQLPRHEQSLSRRRYHVRYHVAALTQRASSTISNVNSTCVHTGFRQLYPPPPAQKF TATDIPSLRNNLITDPSHHVPTCFRPSQTELSHDPVSPNFTFHVKHIFIDFSFCRHIVQYLYPPVQP
Sequences:
>Translated_147_residues MLMILNGTPSYALTSHTSFDVTGIQQLPRHEQSLSRRRYHVRYHVAALTQRASSTISNVNSTCVHTGFRQLYPPPPAQKF TATDIPSLRNNLITDPSHHVPTCFRPSQTELSHDPVSPNFTFHVKHIFIDFSFCRHIVQYLYPPVQP >Mature_147_residues MLMILNGTPSYALTSHTSFDVTGIQQLPRHEQSLSRRRYHVRYHVAALTQRASSTISNVNSTCVHTGFRQLYPPPPAQKF TATDIPSLRNNLITDPSHHVPTCFRPSQTELSHDPVSPNFTFHVKHIFIDFSFCRHIVQYLYPPVQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16809; Mature: 16809
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMILNGTPSYALTSHTSFDVTGIQQLPRHEQSLSRRRYHVRYHVAALTQRASSTISNVN CEEEECCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC STCVHTGFRQLYPPPPAQKFTATDIPSLRNNLITDPSHHVPTCFRPSQTELSHDPVSPNF HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE TFHVKHIFIDFSFCRHIVQYLYPPVQP EEEEEHEEEEHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLMILNGTPSYALTSHTSFDVTGIQQLPRHEQSLSRRRYHVRYHVAALTQRASSTISNVN CEEEECCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC STCVHTGFRQLYPPPPAQKFTATDIPSLRNNLITDPSHHVPTCFRPSQTELSHDPVSPNF HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE TFHVKHIFIDFSFCRHIVQYLYPPVQP EEEEEHEEEEHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA