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The map label for this gene is xylB [H]

Identifier: 50843756

GI number: 50843756

Start: 2521967

End: 2523571

Strand: Reverse

Name: xylB [H]

Synonym: PPA2321

Alternate gene names: 50843756

Gene position: 2523571-2521967 (Counterclockwise)

Preceding gene: 50843757

Following gene: 50843755

Centisome position: 98.57

GC content: 59.25

Gene sequence:

>1605_bases
ATGTTGAACAACGGCCCCTACCTCTTAGGCATCGACTATGGCACCGAGTCGTGCCGAGTCGCGATCTTTGACCTTGCGGG
ACGTCCGCTTACTTTCGCGGCAACCCCGTACAAGACCACTCACCCTCGTCCCGGTTGGGCCGAGCAGGACCCCGAAGAGT
GGTGGAAGGCGCTGCAGGCGTCCTGCCATCGCGCTATTGCGGCTGCTGGAATTTCCCCGGCAGCTATCGCCGGTATCTCG
TATGACGCTACGACGTTAACGATGGTTGCCATGGACGAGCGCGGCAACGAGTTACGTCCCGCCATGATGTGGATGGATGT
CCGTGCCACCGAGCAGGCTGCACGCGCTGAGAACTCGGATTCGGTCGCCCGCCTCTACAACGGTGCTGGCGTTTCTCCGG
CTACCGCCGAGTGGTACCCCTTCAAGGCCGCGTGGTTACGAGAGCACGAGCCGGAAACTTATCGCAGAGCCGCCCACCTC
GTCGATGCCCCTGACTGGGTGACGTTCAAGCTCACCGGAGAATGGACTACCAACATCAACTCGGCCGCCATCCGGATGTA
CTACAACCGAGACAAGGGCGGTTGGCCGGAGGATTTCTATGAGACCATCGGCTGCGACGACGTCTTCGACAAGATCCCGG
GAAGAGTCCTCGACCTGGGCACACCGGTCGGTACCCTCGGTACTATCCCGGCCCAGTTATTGGGTCTACGTCCCGGCATC
CCGGTTGCCCAAGGACTTGGTGATGCCTGGGCCGGTCAGATCGGTCTCGGCGTGCTCGCGCCCGGTTCGATGGCTCTCAT
CACCGGCTCCTCGCACGTGCTCACCGGCCAGTCCGACACCGAGATCCACGGTGAGGGATTCTTCGGTGCCTACTCCGACG
CCGTCATGCCCGGCCAGTACACCGTCGAAGGCAGCCAGGTCTCGACCGGTTCAGTGCTCAAGTGGTTCAAGGACAATTTT
GCAGCTGACTACACCGCTGCTGCCGAGAAAATCGGCCTCAATCCGTACGACGTCCTTAACGAGCAGTCGCGAAACATCAG
ACCGGGTTCCGACGGCCTTATTATTAATGAGTATTTTCAGGGCAACCGCACTCCGTACACTGACTCGAAAGCTCGCGGCA
TTATCTGGGGTCTATCCCTTATGCACACTCCGGCGCATTTCTACCACGCTATTCAGGAATCGGTCTGCTATGGCACGGCC
CACAACCTGCGCGCCATGAAGGCCGCTGGATTTGAGGTAGACCGCATGGTCGCCTGTGGTGGCGCCACGAAGAGCCGTGA
TTGGATACAGATGCACGCCGATGTACCTGGTGTGCCGATCGTGCTCACTGAGGTCGGGGACGCTGTGGTGCTCGGTACCT
GCATGGTAGCTGCTGTCGGCGCTGGCTTGTTCAAGGATCTCCCCGAGGCGGCCACACAGATGGTCCACGAGATTGACTTC
ATTGAGCCGGACCAGGAGCGTCACGAGGAATATCAATATTACGTAGACAAGTACTGCGACACCTACCCGCAACTGTGCCC
CATGATTCATGACATGGTCGATCACGAGGCCGACAAAACTGACGATCACACTGATCAGAGGAGAAGCAATGTCCGAATTG
ATTGA

Upstream 100 bases:

>100_bases
CGGCATGGCGCGAACTCGGCTGGACCGAAGACAACGATGACTGACAAGACGACCGAGCTGCGTGCACCGCTGCCGCAGAG
ACACTTCGCAGGAGACAACG

Downstream 100 bases:

>100_bases
CAAAGCGTTGGCCGATTGCGGCGACACGGACGTCGTGGTCATGGGCCGCAACGTGCTCGAGGAAACCGGGCGCGTCTTCA
AGGAACTCTTCGGTGATGCG

Product: sugar kinase, putative xylulose kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MLNNGPYLLGIDYGTESCRVAIFDLAGRPLTFAATPYKTTHPRPGWAEQDPEEWWKALQASCHRAIAAAGISPAAIAGIS
YDATTLTMVAMDERGNELRPAMMWMDVRATEQAARAENSDSVARLYNGAGVSPATAEWYPFKAAWLREHEPETYRRAAHL
VDAPDWVTFKLTGEWTTNINSAAIRMYYNRDKGGWPEDFYETIGCDDVFDKIPGRVLDLGTPVGTLGTIPAQLLGLRPGI
PVAQGLGDAWAGQIGLGVLAPGSMALITGSSHVLTGQSDTEIHGEGFFGAYSDAVMPGQYTVEGSQVSTGSVLKWFKDNF
AADYTAAAEKIGLNPYDVLNEQSRNIRPGSDGLIINEYFQGNRTPYTDSKARGIIWGLSLMHTPAHFYHAIQESVCYGTA
HNLRAMKAAGFEVDRMVACGGATKSRDWIQMHADVPGVPIVLTEVGDAVVLGTCMVAAVGAGLFKDLPEAATQMVHEIDF
IEPDQERHEEYQYYVDKYCDTYPQLCPMIHDMVDHEADKTDDHTDQRRSNVRID

Sequences:

>Translated_534_residues
MLNNGPYLLGIDYGTESCRVAIFDLAGRPLTFAATPYKTTHPRPGWAEQDPEEWWKALQASCHRAIAAAGISPAAIAGIS
YDATTLTMVAMDERGNELRPAMMWMDVRATEQAARAENSDSVARLYNGAGVSPATAEWYPFKAAWLREHEPETYRRAAHL
VDAPDWVTFKLTGEWTTNINSAAIRMYYNRDKGGWPEDFYETIGCDDVFDKIPGRVLDLGTPVGTLGTIPAQLLGLRPGI
PVAQGLGDAWAGQIGLGVLAPGSMALITGSSHVLTGQSDTEIHGEGFFGAYSDAVMPGQYTVEGSQVSTGSVLKWFKDNF
AADYTAAAEKIGLNPYDVLNEQSRNIRPGSDGLIINEYFQGNRTPYTDSKARGIIWGLSLMHTPAHFYHAIQESVCYGTA
HNLRAMKAAGFEVDRMVACGGATKSRDWIQMHADVPGVPIVLTEVGDAVVLGTCMVAAVGAGLFKDLPEAATQMVHEIDF
IEPDQERHEEYQYYVDKYCDTYPQLCPMIHDMVDHEADKTDDHTDQRRSNVRID
>Mature_534_residues
MLNNGPYLLGIDYGTESCRVAIFDLAGRPLTFAATPYKTTHPRPGWAEQDPEEWWKALQASCHRAIAAAGISPAAIAGIS
YDATTLTMVAMDERGNELRPAMMWMDVRATEQAARAENSDSVARLYNGAGVSPATAEWYPFKAAWLREHEPETYRRAAHL
VDAPDWVTFKLTGEWTTNINSAAIRMYYNRDKGGWPEDFYETIGCDDVFDKIPGRVLDLGTPVGTLGTIPAQLLGLRPGI
PVAQGLGDAWAGQIGLGVLAPGSMALITGSSHVLTGQSDTEIHGEGFFGAYSDAVMPGQYTVEGSQVSTGSVLKWFKDNF
AADYTAAAEKIGLNPYDVLNEQSRNIRPGSDGLIINEYFQGNRTPYTDSKARGIIWGLSLMHTPAHFYHAIQESVCYGTA
HNLRAMKAAGFEVDRMVACGGATKSRDWIQMHADVPGVPIVLTEVGDAVVLGTCMVAAVGAGLFKDLPEAATQMVHEIDF
IEPDQERHEEYQYYVDKYCDTYPQLCPMIHDMVDHEADKTDDHTDQRRSNVRID

Specific function: Unknown

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=532, Percent_Identity=30.8270676691729, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI164663830, Length=556, Percent_Identity=29.6762589928058, Blast_Score=202, Evalue=9e-52,
Organism=Homo sapiens, GI189409120, Length=463, Percent_Identity=25.0539956803456, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI4504007, Length=463, Percent_Identity=25.0539956803456, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI42794763, Length=462, Percent_Identity=24.6753246753247, Blast_Score=109, Evalue=8e-24,
Organism=Homo sapiens, GI41393575, Length=468, Percent_Identity=23.0769230769231, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI88196792, Length=526, Percent_Identity=22.6235741444867, Blast_Score=97, Evalue=5e-20,
Organism=Escherichia coli, GI1787789, Length=523, Percent_Identity=27.5334608030593, Blast_Score=175, Evalue=5e-45,
Organism=Escherichia coli, GI1789987, Length=516, Percent_Identity=27.5193798449612, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1790005, Length=497, Percent_Identity=25.1509054325956, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1790361, Length=508, Percent_Identity=23.8188976377953, Blast_Score=115, Evalue=9e-27,
Organism=Escherichia coli, GI1789168, Length=488, Percent_Identity=23.5655737704918, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1786249, Length=552, Percent_Identity=23.0072463768116, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1789138, Length=497, Percent_Identity=23.5412474849095, Blast_Score=99, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17535599, Length=466, Percent_Identity=26.1802575107296, Blast_Score=103, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6320314, Length=529, Percent_Identity=24.1965973534972, Blast_Score=142, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6321755, Length=500, Percent_Identity=22, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24657106, Length=532, Percent_Identity=26.6917293233083, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI24657102, Length=532, Percent_Identity=26.6917293233083, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI21356323, Length=420, Percent_Identity=26.6666666666667, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24655555, Length=505, Percent_Identity=24.1584158415842, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24655560, Length=505, Percent_Identity=24.1584158415842, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24655570, Length=505, Percent_Identity=24.1584158415842, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24655574, Length=505, Percent_Identity=24.1584158415842, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24655565, Length=505, Percent_Identity=24.1584158415842, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI17864214, Length=482, Percent_Identity=23.8589211618257, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24654573, Length=425, Percent_Identity=23.0588235294118, Blast_Score=82, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: NA

Molecular weight: Translated: 58571; Mature: 58571

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNNGPYLLGIDYGTESCRVAIFDLAGRPLTFAATPYKTTHPRPGWAEQDPEEWWKALQA
CCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
SCHRAIAAAGISPAAIAGISYDATTLTMVAMDERGNELRPAMMWMDVRATEQAARAENSD
HHHHHHHHCCCCHHHEECCCCCCEEEEEEEECCCCCCCCCHHEEEEHHHHHHHHHCCCCC
SVARLYNGAGVSPATAEWYPFKAAWLREHEPETYRRAAHLVDAPDWVTFKLTGEWTTNIN
HHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCEECCCC
SAAIRMYYNRDKGGWPEDFYETIGCDDVFDKIPGRVLDLGTPVGTLGTIPAQLLGLRPGI
CEEEEEEEECCCCCCCHHHHHHCCCHHHHHHCCCEEEECCCCCCCHHCCHHHHHCCCCCC
PVAQGLGDAWAGQIGLGVLAPGSMALITGSSHVLTGQSDTEIHGEGFFGAYSDAVMPGQY
CHHHCCCCHHHHHCCCEEECCCCEEEEECCCEEEECCCCCEECCCCCCCCCCCCCCCCCE
TVEGSQVSTGSVLKWFKDNFAADYTAAAEKIGLNPYDVLNEQSRNIRPGSDGLIINEYFQ
EECCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEHHHC
GNRTPYTDSKARGIIWGLSLMHTPAHFYHAIQESVCYGTAHNLRAMKAAGFEVDRMVACG
CCCCCCCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHCCHHCCHHHHHCCCCHHHEEEEC
GATKSRDWIQMHADVPGVPIVLTEVGDAVVLGTCMVAAVGAGLFKDLPEAATQMVHEIDF
CCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IEPDQERHEEYQYYVDKYCDTYPQLCPMIHDMVDHEADKTDDHTDQRRSNVRID
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MLNNGPYLLGIDYGTESCRVAIFDLAGRPLTFAATPYKTTHPRPGWAEQDPEEWWKALQA
CCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
SCHRAIAAAGISPAAIAGISYDATTLTMVAMDERGNELRPAMMWMDVRATEQAARAENSD
HHHHHHHHCCCCHHHEECCCCCCEEEEEEEECCCCCCCCCHHEEEEHHHHHHHHHCCCCC
SVARLYNGAGVSPATAEWYPFKAAWLREHEPETYRRAAHLVDAPDWVTFKLTGEWTTNIN
HHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCEECCCC
SAAIRMYYNRDKGGWPEDFYETIGCDDVFDKIPGRVLDLGTPVGTLGTIPAQLLGLRPGI
CEEEEEEEECCCCCCCHHHHHHCCCHHHHHHCCCEEEECCCCCCCHHCCHHHHHCCCCCC
PVAQGLGDAWAGQIGLGVLAPGSMALITGSSHVLTGQSDTEIHGEGFFGAYSDAVMPGQY
CHHHCCCCHHHHHCCCEEECCCCEEEEECCCEEEECCCCCEECCCCCCCCCCCCCCCCCE
TVEGSQVSTGSVLKWFKDNFAADYTAAAEKIGLNPYDVLNEQSRNIRPGSDGLIINEYFQ
EECCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEEHHHC
GNRTPYTDSKARGIIWGLSLMHTPAHFYHAIQESVCYGTAHNLRAMKAAGFEVDRMVACG
CCCCCCCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHCCHHCCHHHHHCCCCHHHEEEEC
GATKSRDWIQMHADVPGVPIVLTEVGDAVVLGTCMVAAVGAGLFKDLPEAATQMVHEIDF
CCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IEPDQERHEEYQYYVDKYCDTYPQLCPMIHDMVDHEADKTDDHTDQRRSNVRID
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA