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The map label for this gene is ybaK [H]

Identifier: 50843695

GI number: 50843695

Start: 2448335

End: 2448823

Strand: Direct

Name: ybaK [H]

Synonym: PPA2262

Alternate gene names: 50843695

Gene position: 2448335-2448823 (Clockwise)

Preceding gene: 50843694

Following gene: 50843699

Centisome position: 95.63

GC content: 60.33

Gene sequence:

>489_bases
ATGCCTGCGTCTGACTCTGCATCTGCGGCAACCAAAGCCCTTGCCAAGGCCAAGATCCCGCATGTCCTGCACAGCTACGA
CCACGATCCGTCCAACCATCATTTCGGCGATGAAGGGGCCGCGAAGCTTGGGTTCGACCCATCCATCATGCTCAAAACCC
TGGTCGTCGAGTTGGTCCCCTCGGGCAAGCTTGCCGTCGCCGTCGTTCCGGTGAGCCGCCAGCTTGATCTTAAGGCTTTT
GCCTCAGCCGTAGGTGCGAAAAAAGTCGCTATGGCTGACCCAGCGGCAGCAGAGCGCGCCACGGGGTACATCGTCGGGGG
AATTTCTCCCTTGGGGCAGAAAAAGCGGCTACCCATCTGCATCGACGAGTCGGTGCTAGGGCAGCCGCGGGTGCTGGTTT
CAGGCGGGCGTCGAGGTCTGTCGGTGGAATTGTCACCATCGGACCTGGTGACTGTCACCGGAGCGGTGACGGCAAAAATC
TCCTGCTAA

Upstream 100 bases:

>100_bases
TGCGTGGCGTCGCCCCCATCCTCAGTATTGACGGCCACCCAGTTCCCCAAGACGAGGACATGACCCACCGGTTGCGGACT
TGGGCGGGATCTGAGAACTG

Downstream 100 bases:

>100_bases
CGCCAACCCCGGTCACTTACTGGGGTTCTTGCCGATCGACTGCGGTAGGACGAGCAGCCCGATCACAATGACGACACCAA
GTACCACGTGAATCCACTTG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MPASDSASAATKALAKAKIPHVLHSYDHDPSNHHFGDEGAAKLGFDPSIMLKTLVVELVPSGKLAVAVVPVSRQLDLKAF
ASAVGAKKVAMADPAAAERATGYIVGGISPLGQKKRLPICIDESVLGQPRVLVSGGRRGLSVELSPSDLVTVTGAVTAKI
SC

Sequences:

>Translated_162_residues
MPASDSASAATKALAKAKIPHVLHSYDHDPSNHHFGDEGAAKLGFDPSIMLKTLVVELVPSGKLAVAVVPVSRQLDLKAF
ASAVGAKKVAMADPAAAERATGYIVGGISPLGQKKRLPICIDESVLGQPRVLVSGGRRGLSVELSPSDLVTVTGAVTAKI
SC
>Mature_161_residues
PASDSASAATKALAKAKIPHVLHSYDHDPSNHHFGDEGAAKLGFDPSIMLKTLVVELVPSGKLAVAVVPVSRQLDLKAFA
SAVGAKKVAMADPAAAERATGYIVGGISPLGQKKRLPICIDESVLGQPRVLVSGGRRGLSVELSPSDLVTVTGAVTAKIS
C

Specific function: Functions in trans to edit the amino acid from incorrectly charged Cys-tRNA(Pro); has much weaker activity against Ala-tRNA(Pro). Probably compensates for the lack of Cys- tRNA(Pro) editing by ProRS. Additionally serves as a general deacylase with weak ac

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prolyl-tRNA editing family. ProX subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786688, Length=153, Percent_Identity=53.5947712418301, Blast_Score=152, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004369
- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 16615; Mature: 16484

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASDSASAATKALAKAKIPHVLHSYDHDPSNHHFGDEGAAKLGFDPSIMLKTLVVELVP
CCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCC
SGKLAVAVVPVSRQLDLKAFASAVGAKKVAMADPAAAERATGYIVGGISPLGQKKRLPIC
CCCEEEEEEECCCCCCHHHHHHHHCCCEEECCCCCCHHHCCEEEEECCCCCCCCCCCCEE
IDESVLGQPRVLVSGGRRGLSVELSPSDLVTVTGAVTAKISC
ECCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEEEEEEECC
>Mature Secondary Structure 
PASDSASAATKALAKAKIPHVLHSYDHDPSNHHFGDEGAAKLGFDPSIMLKTLVVELVP
CCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCC
SGKLAVAVVPVSRQLDLKAFASAVGAKKVAMADPAAAERATGYIVGGISPLGQKKRLPIC
CCCEEEEEEECCCCCCHHHHHHHHCCCEEECCCCCCHHHCCEEEEECCCCCCCCCCCCEE
IDESVLGQPRVLVSGGRRGLSVELSPSDLVTVTGAVTAKISC
ECCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10813833 [H]