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The map label for this gene is ssb1 [H]

Identifier: 50843664

GI number: 50843664

Start: 2412712

End: 2413266

Strand: Reverse

Name: ssb1 [H]

Synonym: PPA2229

Alternate gene names: 50843664

Gene position: 2413266-2412712 (Counterclockwise)

Preceding gene: 50843665

Following gene: 50843663

Centisome position: 94.26

GC content: 61.44

Gene sequence:

>555_bases
ATGGCTGGCGAAACACCCATCACGGTGATTGGCAACTTAACCGCCGATCCTGAGCTGCGCTTCACCCCCAACGGGGTGCC
TGTCGCGAACTTCACGGTGGCATCAACCCCGCGAACCTTTGACCGACAGACTAATGAGTGGCGTGACGGTGAGGCCATGT
TCCTCAACTGCTCGGTGTGGCGCCAGTTCGCCGAGAACGTCGCTGAGTCCCTGTCCAAGGGAATGCGCGTCATCGTCAGC
GGCAACCTCAAGGCTCGCTCCTATGAGGACCGCAACGGCAACCGTCGCACCTCCTATGAGATTGACGTCATCGAGATTGG
CCCGTCGCTGAAATTCGCTGCGGCGAAGGTTTCGCGTAACCAGTCCTCCGGCGGAGGTAACTGGGGTGGAAACTCCGCTG
GTGGCCAAGGCGGTTGGTCTGGTGGCAATGGTGGCCAGGGTGGTAACTGGGGTGGAAACCCCGGGAACCAGGGGTCCTAT
AACAACGGTGACGCCAACCGTGGTGGTGGAGTCGATCCCTGGGCCTCAGCCCAGACCGACGAGCCCCCGTTCTGA

Upstream 100 bases:

>100_bases
CCCTGTTTCCCAGGCGATACATGGGAGACTGTCCGGGGTGAACGGCACACTGGAACCATTGATTGCAAACTACTAGAACT
ACTGCGATCTGGAGACTGAC

Downstream 100 bases:

>100_bases
TCGGTAGGGCTACACCGCTGACAAGCGGCGTCATCAACAAACATCAGGTTCGGCGCCCCTATTCGGGGTCGCGGACAAGG
CACATTCCGGCAAGAGCCGG

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB 1; Helix-destabilizing protein 1 [H]

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MAGETPITVIGNLTADPELRFTPNGVPVANFTVASTPRTFDRQTNEWRDGEAMFLNCSVWRQFAENVAESLSKGMRVIVS
GNLKARSYEDRNGNRRTSYEIDVIEIGPSLKFAAAKVSRNQSSGGGNWGGNSAGGQGGWSGGNGGQGGNWGGNPGNQGSY
NNGDANRGGGVDPWASAQTDEPPF

Sequences:

>Translated_184_residues
MAGETPITVIGNLTADPELRFTPNGVPVANFTVASTPRTFDRQTNEWRDGEAMFLNCSVWRQFAENVAESLSKGMRVIVS
GNLKARSYEDRNGNRRTSYEIDVIEIGPSLKFAAAKVSRNQSSGGGNWGGNSAGGQGGWSGGNGGQGGNWGGNPGNQGSY
NNGDANRGGGVDPWASAQTDEPPF
>Mature_183_residues
AGETPITVIGNLTADPELRFTPNGVPVANFTVASTPRTFDRQTNEWRDGEAMFLNCSVWRQFAENVAESLSKGMRVIVSG
NLKARSYEDRNGNRRTSYEIDVIEIGPSLKFAAAKVSRNQSSGGGNWGGNSAGGQGGWSGGNGGQGGNWGGNPGNQGSYN
NGDANRGGGVDPWASAQTDEPPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=106, Percent_Identity=32.0754716981132, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 19387; Mature: 19256

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGETPITVIGNLTADPELRFTPNGVPVANFTVASTPRTFDRQTNEWRDGEAMFLNCSVW
CCCCCCEEEEECCCCCCCEEECCCCCCEEEEEECCCCCHHCCCCCCCCCCCEEEEEHHHH
RQFAENVAESLSKGMRVIVSGNLKARSYEDRNGNRRTSYEIDVIEIGPSLKFAAAKVSRN
HHHHHHHHHHHHCCEEEEEECCCEECCCCCCCCCCCCEEEEEEEEECCCCEEHHHHHCCC
QSSGGGNWGGNSAGGQGGWSGGNGGQGGNWGGNPGNQGSYNNGDANRGGGVDPWASAQTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPPF
CCCC
>Mature Secondary Structure 
AGETPITVIGNLTADPELRFTPNGVPVANFTVASTPRTFDRQTNEWRDGEAMFLNCSVW
CCCCCEEEEECCCCCCCEEECCCCCCEEEEEECCCCCHHCCCCCCCCCCCEEEEEHHHH
RQFAENVAESLSKGMRVIVSGNLKARSYEDRNGNRRTSYEIDVIEIGPSLKFAAAKVSRN
HHHHHHHHHHHHCCEEEEEECCCEECCCCCCCCCCCCEEEEEEEEECCCCEEHHHHHCCC
QSSGGGNWGGNSAGGQGGWSGGNGGQGGNWGGNPGNQGSYNNGDANRGGGVDPWASAQTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPPF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]