| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843658
Identifier: 50843658
GI number: 50843658
Start: 2408580
End: 2408954
Strand: Direct
Name: 50843658
Synonym: PPA2223
Alternate gene names: NA
Gene position: 2408580-2408954 (Clockwise)
Preceding gene: 50843657
Following gene: 50843671
Centisome position: 94.08
GC content: 66.13
Gene sequence:
>375_bases GTGGCCCTCCCCGCGGTCGCGAATACCCTTGCCACCCTACCGATATCGGCCCGAGCGACCATCGTTCGCGTCAACAGCCA CCACGATTACCCCCTTCCCCTAACCGACCGCGTCACCGTCGTGACGGCGCCTCGCGACCCCGACGGGATCGTCGCCACCG TCCAAGGCCTAGACCTTCCCCAGAACACCCACGCCTTCGTTCACGGAGAGGCCGCCATGGTCCGTCCGATGCGCCGCCAC CTGCGGCTAGAACGTGGGTTGCCCAGGGACCGCATTCACCCGTCGGCCTACTGGTTCGCTGGTCGCGACGCTGACGGTTG GCGCGCAATAAAGCAGGACTTCAACCGCTCCATGGACGCCGAGTCGGGAGACTAA
Upstream 100 bases:
>100_bases CCAGGCCGTCCAGCCGGGAGATCAAGTCGCGGTTCGTGGACCGGGAGGTCACTGACAGACGCCCGACGACATCTGCCACC TGCTCGCCGTCGCCGACGCG
Downstream 100 bases:
>100_bases AACGGTCCACCTGGGGCATTCCCTGCTCACACCAAGCTTGTCGCATTTCAGGTCAGGCGGTGACGACGTTGGACAGAATC AGACCAATTATGATGAGCCC
Product: siderophore-interacting protein (fragment)
Products: NA
Alternate protein names: Siderophore Utilization Protein; Iron Transport/Utilisation Related Protein
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MALPAVANTLATLPISARATIVRVNSHHDYPLPLTDRVTVVTAPRDPDGIVATVQGLDLPQNTHAFVHGEAAMVRPMRRH LRLERGLPRDRIHPSAYWFAGRDADGWRAIKQDFNRSMDAESGD
Sequences:
>Translated_124_residues MALPAVANTLATLPISARATIVRVNSHHDYPLPLTDRVTVVTAPRDPDGIVATVQGLDLPQNTHAFVHGEAAMVRPMRRH LRLERGLPRDRIHPSAYWFAGRDADGWRAIKQDFNRSMDAESGD >Mature_123_residues ALPAVANTLATLPISARATIVRVNSHHDYPLPLTDRVTVVTAPRDPDGIVATVQGLDLPQNTHAFVHGEAAMVRPMRRHL RLERGLPRDRIHPSAYWFAGRDADGWRAIKQDFNRSMDAESGD
Specific function: Unknown
COG id: COG2375
COG function: function code P; Siderophore-interacting protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13756; Mature: 13625
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPAVANTLATLPISARATIVRVNSHHDYPLPLTDRVTVVTAPRDPDGIVATVQGLDLP CCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCC QNTHAFVHGEAAMVRPMRRHLRLERGLPRDRIHPSAYWFAGRDADGWRAIKQDFNRSMDA CCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCC ESGD CCCC >Mature Secondary Structure ALPAVANTLATLPISARATIVRVNSHHDYPLPLTDRVTVVTAPRDPDGIVATVQGLDLP CCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCC QNTHAFVHGEAAMVRPMRRHLRLERGLPRDRIHPSAYWFAGRDADGWRAIKQDFNRSMDA CCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCC ESGD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA