| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843655
Identifier: 50843655
GI number: 50843655
Start: 2405472
End: 2406290
Strand: Reverse
Name: 50843655
Synonym: PPA2220
Alternate gene names: NA
Gene position: 2406290-2405472 (Counterclockwise)
Preceding gene: 50843656
Following gene: 50843654
Centisome position: 93.99
GC content: 59.34
Gene sequence:
>819_bases ATGACGAACGACAAGACGCCTACGAACGCTACTATCGACGCTCTTTACGACCGCAGTGTTGTTGACCAGTCCGGTAACAA GATCGGCGAGATCGGTCAGGTTTACCTCGATGACGCCTCAGGCCAGCCGGCTTGGGTGACTGTCAAGACTGGGCTTTTCG GACGCAATGAGACCTTCGTCCCCTTCAAGGGCCTGGAGACCTCAGGCGACCAGATCCGCGCTCCCTACACCAAGGACAAG GTGAAGGATGCCCCGAACGTTGACCCCGACGGTCACCTCTCTGAGGACGAGACTGACGAGCTTTACCGTTACTACTCCGA CACTTTCGCTTCGGACTCGAAGGCCGCCGATACAAACACGAACCAGGGTGTTGCTGGTCAGAAGGTTGCCGGCACCGAAT CTGCCGCTGATACCAAGGCTCAGACCACGGCTGATCAGAAGTCCCCGGTCGCCGGGGATGGTTCGGTCGTCCGCCACGAG GAGCGCCTCAACGTGGGCAAGGAGCGAGTCGAGAGTGGACGCATGCGTATCCGCAAGCACGTCGTTCACGACACTGAGAC CGTGGAGGTTCCGGTTGAGCGTGAGGAGATCCACGTCGAGCGCGTTCCCCTTGACGAAAAGGTCGCCGCTGACGATGCCA AGCTTTCCGAGGGCACCCAGGACATCGTGACCCATGAGGAGCGCCCGGTCGTCAATAAGGAGACTGTCGGCGTCGAGAAG ATCAAGATTGGTAAGGAGGCCGTGCAGGACACCGAGACCGTGTCCGGCAAGGTTGCCAAGGAGCAGATCGACATCGATAA CGCCAAGCACACCAAGTGA
Upstream 100 bases:
>100_bases TTTGTGTGTGACTCCCCGGTCCGTATCGTTGAACACATCAACCGAGCCCGTTCGGTTCCCCGGCGGGATTTGGTAGAAAT CAAAACGAAGGGACATAAGA
Downstream 100 bases:
>100_bases TGCACTGACGACGGGTGAGGCCCAGATTCCTACGGCCTGGGCCTCTGTCTGCGTCGGGATGCCATTAGGCCGCTAGGATC GGTCACATGATCGATCCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTNDKTPTNATIDALYDRSVVDQSGNKIGEIGQVYLDDASGQPAWVTVKTGLFGRNETFVPFKGLETSGDQIRAPYTKDK VKDAPNVDPDGHLSEDETDELYRYYSDTFASDSKAADTNTNQGVAGQKVAGTESAADTKAQTTADQKSPVAGDGSVVRHE ERLNVGKERVESGRMRIRKHVVHDTETVEVPVEREEIHVERVPLDEKVAADDAKLSEGTQDIVTHEERPVVNKETVGVEK IKIGKEAVQDTETVSGKVAKEQIDIDNAKHTK
Sequences:
>Translated_272_residues MTNDKTPTNATIDALYDRSVVDQSGNKIGEIGQVYLDDASGQPAWVTVKTGLFGRNETFVPFKGLETSGDQIRAPYTKDK VKDAPNVDPDGHLSEDETDELYRYYSDTFASDSKAADTNTNQGVAGQKVAGTESAADTKAQTTADQKSPVAGDGSVVRHE ERLNVGKERVESGRMRIRKHVVHDTETVEVPVEREEIHVERVPLDEKVAADDAKLSEGTQDIVTHEERPVVNKETVGVEK IKIGKEAVQDTETVSGKVAKEQIDIDNAKHTK >Mature_271_residues TNDKTPTNATIDALYDRSVVDQSGNKIGEIGQVYLDDASGQPAWVTVKTGLFGRNETFVPFKGLETSGDQIRAPYTKDKV KDAPNVDPDGHLSEDETDELYRYYSDTFASDSKAADTNTNQGVAGQKVAGTESAADTKAQTTADQKSPVAGDGSVVRHEE RLNVGKERVESGRMRIRKHVVHDTETVEVPVEREEIHVERVPLDEKVAADDAKLSEGTQDIVTHEERPVVNKETVGVEKI KIGKEAVQDTETVSGKVAKEQIDIDNAKHTK
Specific function: Unknown
COG id: COG3861
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011756 - InterPro: IPR019060 - InterPro: IPR014747 - InterPro: IPR007903 - InterPro: IPR011033 [H]
Pfam domain/function: PF09557 DUF2382; PF05239 PRC [H]
EC number: NA
Molecular weight: Translated: 29747; Mature: 29616
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDKTPTNATIDALYDRSVVDQSGNKIGEIGQVYLDDASGQPAWVTVKTGLFGRNETFV CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEE PFKGLETSGDQIRAPYTKDKVKDAPNVDPDGHLSEDETDELYRYYSDTFASDSKAADTNT EECCCCCCCCCEECCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC NQGVAGQKVAGTESAADTKAQTTADQKSPVAGDGSVVRHEERLNVGKERVESGRMRIRKH CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH VVHDTETVEVPVEREEIHVERVPLDEKVAADDAKLSEGTQDIVTHEERPVVNKETVGVEK HHCCCCEEEECCCHHHEEEEECCCCHHHCCCCCHHHCCCHHHHCCCCCCCCCCHHCCHHH IKIGKEAVQDTETVSGKVAKEQIDIDNAKHTK HHHCHHHHHHHHHHCCHHHHHHCCCCCCCCCC >Mature Secondary Structure TNDKTPTNATIDALYDRSVVDQSGNKIGEIGQVYLDDASGQPAWVTVKTGLFGRNETFV CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEE PFKGLETSGDQIRAPYTKDKVKDAPNVDPDGHLSEDETDELYRYYSDTFASDSKAADTNT EECCCCCCCCCEECCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC NQGVAGQKVAGTESAADTKAQTTADQKSPVAGDGSVVRHEERLNVGKERVESGRMRIRKH CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH VVHDTETVEVPVEREEIHVERVPLDEKVAADDAKLSEGTQDIVTHEERPVVNKETVGVEK HHCCCCEEEECCCHHHEEEEECCCCHHHCCCCCHHHCCCHHHHCCCCCCCCCCHHCCHHH IKIGKEAVQDTETVSGKVAKEQIDIDNAKHTK HHHCHHHHHHHHHHCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]