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The map label for this gene is dppB [H]

Identifier: 50843591

GI number: 50843591

Start: 2337710

End: 2338633

Strand: Direct

Name: dppB [H]

Synonym: PPA2153

Alternate gene names: 50843591

Gene position: 2337710-2338633 (Clockwise)

Preceding gene: 50843590

Following gene: 50843592

Centisome position: 91.31

GC content: 59.63

Gene sequence:

>924_bases
ATGTCCAGATACATCGTCAGACGCATCCTCCAGATGATTCCGGTGCTCATCGGGACGACGTTCATCATTTTCTGTTTGGT
CTTTGCCTTGCCCGGTGACCCTACGGCCGGACGATGCGGTGAACGCCCTTGCCCGCCCTCCTACGTCGCGGCATTCCGGG
CCGAATACAACCTCGACAAACCACTACTCGTCCAGTACGGCCTGTACTTGGAGAAACTGTTGCACGGAAACCTCGGCGTC
GACTATTACGGCAACACCGTCGTCTCAGAGCTCGGTGCCCGCTACCCCGTGACGATCAAGCTGGCGATCATCGCCCTGCT
CGTTGAGATCGTCATTGGCATCCTCGCCGGTGCGTGGGCGGGTGTGCGACGCGGCAAATTCATCGACTATTTCGTCCTGG
TGTCCTCGCTCATCGTCATTTCAATCCCGATCTTCGTCATCGGTTCGCTGGCACAGCTTGTCTTCGGTCTGCGGCTGGGC
TGGTTCCCAGTGACAGCCGGGGACGGCTCATGGGGAGCACTCGTCCTGCCAGGACTCGTGCTGGGAGCGTTGTCAGTGGC
CTACGTGGCCCGCCTGACAAGGTCGAACCTGCTGGAAAACCAGCGAGCCGACTACGTGCGCACCGCCAAGGCTAAGGGCA
TGTCGCCGTCACGGATCGTGACTGTGCACACCCTGCGCAACTCCCTCATCCCCGTGATCACCTTCATCGGGTATGACTTC
GGTGCCCTTATGGGTGGTGCCATCGTCACCGAGCGCATCTTCAACATCAACGGGATCGGCAATTACGTCTACCGGTCGAT
CAACCAACGCGACGGTGTCTCGGTGGTCGGTGCGGTGACCTGCCTCGTGTTGGTATATCTGCTCGCAAACCTCCTCGTCG
ACCTGCTGTACGGGGTACTCGACCCGAGGATTAGCCATGACTGA

Upstream 100 bases:

>100_bases
TGATTTCCAGTCGGTCAGCGTGAAGTGATTCATCCGTGATGACGCACCCGTCGGTCTGCCGAATTAGTCTCGACGGACCG
ACGGTGTCGTGAGGAACACC

Downstream 100 bases:

>100_bases
ATCACGTACGAACCTTTCCCCGCTCGGCTCTAGCGGTCCTGAGGCCATGGCCGATCCCACGCCCGGCGAGAACGATGTAC
TGGGCAACTCCAAGCCGCGC

Product: putative peptide ABC transporter, permease component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSRYIVRRILQMIPVLIGTTFIIFCLVFALPGDPTAGRCGERPCPPSYVAAFRAEYNLDKPLLVQYGLYLEKLLHGNLGV
DYYGNTVVSELGARYPVTIKLAIIALLVEIVIGILAGAWAGVRRGKFIDYFVLVSSLIVISIPIFVIGSLAQLVFGLRLG
WFPVTAGDGSWGALVLPGLVLGALSVAYVARLTRSNLLENQRADYVRTAKAKGMSPSRIVTVHTLRNSLIPVITFIGYDF
GALMGGAIVTERIFNINGIGNYVYRSINQRDGVSVVGAVTCLVLVYLLANLLVDLLYGVLDPRISHD

Sequences:

>Translated_307_residues
MSRYIVRRILQMIPVLIGTTFIIFCLVFALPGDPTAGRCGERPCPPSYVAAFRAEYNLDKPLLVQYGLYLEKLLHGNLGV
DYYGNTVVSELGARYPVTIKLAIIALLVEIVIGILAGAWAGVRRGKFIDYFVLVSSLIVISIPIFVIGSLAQLVFGLRLG
WFPVTAGDGSWGALVLPGLVLGALSVAYVARLTRSNLLENQRADYVRTAKAKGMSPSRIVTVHTLRNSLIPVITFIGYDF
GALMGGAIVTERIFNINGIGNYVYRSINQRDGVSVVGAVTCLVLVYLLANLLVDLLYGVLDPRISHD
>Mature_306_residues
SRYIVRRILQMIPVLIGTTFIIFCLVFALPGDPTAGRCGERPCPPSYVAAFRAEYNLDKPLLVQYGLYLEKLLHGNLGVD
YYGNTVVSELGARYPVTIKLAIIALLVEIVIGILAGAWAGVRRGKFIDYFVLVSSLIVISIPIFVIGSLAQLVFGLRLGW
FPVTAGDGSWGALVLPGLVLGALSVAYVARLTRSNLLENQRADYVRTAKAKGMSPSRIVTVHTLRNSLIPVITFIGYDFG
ALMGGAIVTERIFNINGIGNYVYRSINQRDGVSVVGAVTCLVLVYLLANLLVDLLYGVLDPRISHD

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=35.7988165680473, Blast_Score=205, Evalue=2e-54,
Organism=Escherichia coli, GI1787053, Length=308, Percent_Identity=35.0649350649351, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1787497, Length=314, Percent_Identity=35.031847133758, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1789888, Length=307, Percent_Identity=33.2247557003257, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1787761, Length=327, Percent_Identity=35.474006116208, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1787550, Length=269, Percent_Identity=27.5092936802974, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1788504, Length=368, Percent_Identity=26.6304347826087, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33406; Mature: 33275

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYIVRRILQMIPVLIGTTFIIFCLVFALPGDPTAGRCGERPCPPSYVAAFRAEYNLDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
PLLVQYGLYLEKLLHGNLGVDYYGNTVVSELGARYPVTIKLAIIALLVEIVIGILAGAWA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GVRRGKFIDYFVLVSSLIVISIPIFVIGSLAQLVFGLRLGWFPVTAGDGSWGALVLPGLV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHH
LGALSVAYVARLTRSNLLENQRADYVRTAKAKGMSPSRIVTVHTLRNSLIPVITFIGYDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
GALMGGAIVTERIFNINGIGNYVYRSINQRDGVSVVGAVTCLVLVYLLANLLVDLLYGVL
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPRISHD
CCCCCCC
>Mature Secondary Structure 
SRYIVRRILQMIPVLIGTTFIIFCLVFALPGDPTAGRCGERPCPPSYVAAFRAEYNLDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
PLLVQYGLYLEKLLHGNLGVDYYGNTVVSELGARYPVTIKLAIIALLVEIVIGILAGAWA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GVRRGKFIDYFVLVSSLIVISIPIFVIGSLAQLVFGLRLGWFPVTAGDGSWGALVLPGLV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHH
LGALSVAYVARLTRSNLLENQRADYVRTAKAKGMSPSRIVTVHTLRNSLIPVITFIGYDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
GALMGGAIVTERIFNINGIGNYVYRSINQRDGVSVVGAVTCLVLVYLLANLLVDLLYGVL
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPRISHD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]