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The map label for this gene is ycgR [H]

Identifier: 50843583

GI number: 50843583

Start: 2325337

End: 2326260

Strand: Direct

Name: ycgR [H]

Synonym: PPA2145

Alternate gene names: 50843583

Gene position: 2325337-2326260 (Clockwise)

Preceding gene: 50843582

Following gene: 50843584

Centisome position: 90.82

GC content: 60.82

Gene sequence:

>924_bases
ATGAGCGAGCTGCCTCCCCAGGTAAATGCCTGGCTCGTGATCTTCATCGGTATCTGGCTACAGGCCGTACCCTTCCTGCT
CTTGGGAACGATCATCTCATCGACCCTAACAGCCTTCCTCAAACCGCAAGCTCTGGCCCGTTTCCTGCCACGTCAAACTG
CCTTGGCCGTAGTGGTCGCGGGGCTTGCCGGCATCGCCCTTCCCGCCTGCGAGTGCGCCTCGGTGCCCACCACCAAGTCC
TTGGTCAGGGCAGGCGTACCGACAGCCGCAGCCCTCACCTTTATGGTGGCTTCCCCGGCCATCAATCCGGTCGTCATAGC
AGCCACCGCGGTTGCCTACACCGTCAATCCTCGGATGGCTGTAGCGCGGTTCATCGCCGGATTGTTGGCCGCCGTCCTCA
TTGGTTTGGGGTGGATCTGGCTAGGGCGTCCTCTCCGCGGGGTTGATGACGGCTCCCCGGGATCTGCCTGCGAGGAGGCC
TGCGGACTACATGACCACCAACCGCGCACCATGTCCGCAATGGCCGAGACCTTCCGCAGCGAGCTAACTCACGATTTCAT
CCAATCCTGCGGCTTCCTCGTCATTGGTGCGGCGATCGCTGCCACCGTCAAGGTCTGTGTTCCGATCGCCTGGATGCAGG
CTTTGACGATCAACGTTGTAGTGGAGGCAGCAGTATTGAGCCTGCTAGCCGTCATCGTCGCCCTGTGCTCAGAAGCCGAC
GCCTTCATGGCTGTTTCTCTGACGAGTTTCTCCCCCACCGCCCAGCTGGCCTTCCTGGCGATCGGACCGATCGTTGACGT
CAAGCTGATGGCTATGGAGGGCGGGGCCTTTGGTGCTGGGTTCCTTAAACGGTTCGTCCCGCTGGCAACGTGCTGCTGCT
TCGTCTCAGCAATCCTCATTGGTGCTCTCATCTTTTCCTCATAG

Upstream 100 bases:

>100_bases
TCCGCGTCACCGGCACGTACCTGCCTAGTTCCCCCAACGGCGACACTCGCTTCAGGGTGGAACGCATCGACCAGATCCCG
GTACCGGAGAACCCGTATAT

Downstream 100 bases:

>100_bases
CCAACCTGCACTGATGACCACAACTGGCACGAACCAGTGACAGAGTGTGCCCCAATATCGCCAGTCATCTGAGAATTCGA
AGAACTCTCCCAGAATATCG

Product: mebrane protein, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSELPPQVNAWLVIFIGIWLQAVPFLLLGTIISSTLTAFLKPQALARFLPRQTALAVVVAGLAGIALPACECASVPTTKS
LVRAGVPTAAALTFMVASPAINPVVIAATAVAYTVNPRMAVARFIAGLLAAVLIGLGWIWLGRPLRGVDDGSPGSACEEA
CGLHDHQPRTMSAMAETFRSELTHDFIQSCGFLVIGAAIAATVKVCVPIAWMQALTINVVVEAAVLSLLAVIVALCSEAD
AFMAVSLTSFSPTAQLAFLAIGPIVDVKLMAMEGGAFGAGFLKRFVPLATCCCFVSAILIGALIFSS

Sequences:

>Translated_307_residues
MSELPPQVNAWLVIFIGIWLQAVPFLLLGTIISSTLTAFLKPQALARFLPRQTALAVVVAGLAGIALPACECASVPTTKS
LVRAGVPTAAALTFMVASPAINPVVIAATAVAYTVNPRMAVARFIAGLLAAVLIGLGWIWLGRPLRGVDDGSPGSACEEA
CGLHDHQPRTMSAMAETFRSELTHDFIQSCGFLVIGAAIAATVKVCVPIAWMQALTINVVVEAAVLSLLAVIVALCSEAD
AFMAVSLTSFSPTAQLAFLAIGPIVDVKLMAMEGGAFGAGFLKRFVPLATCCCFVSAILIGALIFSS
>Mature_306_residues
SELPPQVNAWLVIFIGIWLQAVPFLLLGTIISSTLTAFLKPQALARFLPRQTALAVVVAGLAGIALPACECASVPTTKSL
VRAGVPTAAALTFMVASPAINPVVIAATAVAYTVNPRMAVARFIAGLLAAVLIGLGWIWLGRPLRGVDDGSPGSACEEAC
GLHDHQPRTMSAMAETFRSELTHDFIQSCGFLVIGAAIAATVKVCVPIAWMQALTINVVVEAAVLSLLAVIVALCSEADA
FMAVSLTSFSPTAQLAFLAIGPIVDVKLMAMEGGAFGAGFLKRFVPLATCCCFVSAILIGALIFSS

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 31811; Mature: 31680

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELPPQVNAWLVIFIGIWLQAVPFLLLGTIISSTLTAFLKPQALARFLPRQTALAVVVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHH
GLAGIALPACECASVPTTKSLVRAGVPTAAALTFMVASPAINPVVIAATAVAYTVNPRMA
HHHHHHHCCHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHH
VARFIAGLLAAVLIGLGWIWLGRPLRGVDDGSPGSACEEACGLHDHQPRTMSAMAETFRS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH
ELTHDFIQSCGFLVIGAAIAATVKVCVPIAWMQALTINVVVEAAVLSLLAVIVALCSEAD
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AFMAVSLTSFSPTAQLAFLAIGPIVDVKLMAMEGGAFGAGFLKRFVPLATCCCFVSAILI
HHEEEEECCCCCHHHHHHHHHCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
GALIFSS
HHHHHCC
>Mature Secondary Structure 
SELPPQVNAWLVIFIGIWLQAVPFLLLGTIISSTLTAFLKPQALARFLPRQTALAVVVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHH
GLAGIALPACECASVPTTKSLVRAGVPTAAALTFMVASPAINPVVIAATAVAYTVNPRMA
HHHHHHHCCHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHH
VARFIAGLLAAVLIGLGWIWLGRPLRGVDDGSPGSACEEACGLHDHQPRTMSAMAETFRS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH
ELTHDFIQSCGFLVIGAAIAATVKVCVPIAWMQALTINVVVEAAVLSLLAVIVALCSEAD
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AFMAVSLTSFSPTAQLAFLAIGPIVDVKLMAMEGGAFGAGFLKRFVPLATCCCFVSAILI
HHEEEEECCCCCHHHHHHHHHCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
GALIFSS
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]