| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843563
Identifier: 50843563
GI number: 50843563
Start: 2300494
End: 2301105
Strand: Direct
Name: 50843563
Synonym: PPA2126
Alternate gene names: NA
Gene position: 2300494-2301105 (Clockwise)
Preceding gene: 50843562
Following gene: 50843564
Centisome position: 89.85
GC content: 56.54
Gene sequence:
>612_bases ATGACCAAGCAAGAATTCATCCTTACCTTCATTTCGGTTGCGATCTTCTTAGTTCTTCTTGTTCCTACGCTTATCTACAA GATTCGCAGGGAGCGGAAACTCCCCACCGGCGAGCCGGTACCCGTGACTCAGGGGCAACGTTTCATGGCCTTGCTGGGTG ATACCATGTGGGTAGGCCTGCTTACGCTGGCAGGATGGGGCTTGTTCAGCGGCGCCACACTCGGGTATGAGTTCAACCAC GTCGACCAAAAATCGGCCATTGAGCAGGCCATTCACCCCGCAGGCAGCGCACTCCTGCTAGGAATTAACGTCGGCTACGT ACTGATATCGCTCGTGGGACGCCTTGGCGTCTCCCCTGGAACGAACTCCCGACAGCTTGCCTGGGTAGATTCGACGGGTC GCCCGGCTGGGCGCGGTCACACTTTCGTTATCGGCCTGGCTTTCATCTTGTCCATTCTCGGCAAGACGTCGGTCGGAATC TTTGCATCGATCGGTGGCGCCATCCTCTTCATCGAGGCGGTCTCCGTACTCACAACTAAACGCGGCAGTATCGGCAAACT CATGCACGTGAATCTCGTCGATGCCAGATGCATCACGCCGCAACCATGCTGA
Upstream 100 bases:
>100_bases CTCAACCCCACGTATCACTCGGTTTTCGTGCCGCGGAACGATGCGCGACGACCTTCCGCCACGGCATGGTGGATGCCATG ACCACGGATGAAAGGAACTC
Downstream 100 bases:
>100_bases CTTACGCATCGCCCGCCCACAGAGGACGGGCGATCGTCACTTTCACCTGTTCAGCCTTGACGGGTGGTCTTCAGCCGCGG GTTCTTCTTATTGATGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MTKQEFILTFISVAIFLVLLVPTLIYKIRRERKLPTGEPVPVTQGQRFMALLGDTMWVGLLTLAGWGLFSGATLGYEFNH VDQKSAIEQAIHPAGSALLLGINVGYVLISLVGRLGVSPGTNSRQLAWVDSTGRPAGRGHTFVIGLAFILSILGKTSVGI FASIGGAILFIEAVSVLTTKRGSIGKLMHVNLVDARCITPQPC
Sequences:
>Translated_203_residues MTKQEFILTFISVAIFLVLLVPTLIYKIRRERKLPTGEPVPVTQGQRFMALLGDTMWVGLLTLAGWGLFSGATLGYEFNH VDQKSAIEQAIHPAGSALLLGINVGYVLISLVGRLGVSPGTNSRQLAWVDSTGRPAGRGHTFVIGLAFILSILGKTSVGI FASIGGAILFIEAVSVLTTKRGSIGKLMHVNLVDARCITPQPC >Mature_202_residues TKQEFILTFISVAIFLVLLVPTLIYKIRRERKLPTGEPVPVTQGQRFMALLGDTMWVGLLTLAGWGLFSGATLGYEFNHV DQKSAIEQAIHPAGSALLLGINVGYVLISLVGRLGVSPGTNSRQLAWVDSTGRPAGRGHTFVIGLAFILSILGKTSVGIF ASIGGAILFIEAVSVLTTKRGSIGKLMHVNLVDARCITPQPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21700; Mature: 21569
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQEFILTFISVAIFLVLLVPTLIYKIRRERKLPTGEPVPVTQGQRFMALLGDTMWVGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LTLAGWGLFSGATLGYEFNHVDQKSAIEQAIHPAGSALLLGINVGYVLISLVGRLGVSPG HHHHHHHHHCCCCCCEECCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCC TNSRQLAWVDSTGRPAGRGHTFVIGLAFILSILGKTSVGIFASIGGAILFIEAVSVLTTK CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHC RGSIGKLMHVNLVDARCITPQPC CCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure TKQEFILTFISVAIFLVLLVPTLIYKIRRERKLPTGEPVPVTQGQRFMALLGDTMWVGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LTLAGWGLFSGATLGYEFNHVDQKSAIEQAIHPAGSALLLGINVGYVLISLVGRLGVSPG HHHHHHHHHCCCCCCEECCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCC TNSRQLAWVDSTGRPAGRGHTFVIGLAFILSILGKTSVGIFASIGGAILFIEAVSVLTTK CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHC RGSIGKLMHVNLVDARCITPQPC CCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA