| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is 50843529
Identifier: 50843529
GI number: 50843529
Start: 2264240
End: 2265607
Strand: Reverse
Name: 50843529
Synonym: PPA2090
Alternate gene names: NA
Gene position: 2265607-2264240 (Counterclockwise)
Preceding gene: 50843530
Following gene: 50843528
Centisome position: 88.49
GC content: 60.09
Gene sequence:
>1368_bases ATGCTCACTTCGCTTCAGGGTATACGTCCGCTGCGCGGTTTTCACCGCATGGCATTCCCCTTCACGTCATGGCACATGGT TCTCGTGACGGTCGGAGGAGCCATGTGCAGCTTCATTGCGTTGCGAGGTCGATGGGCTTGGGGGTTGTGGCAAGTGCAGG ATGTCGCCGTCACGCTCCTGGAGTCCAGTATGCTGTGGGGCATCGTGGCTGGCCTCATGGGGGCGGGCCTAGCGGCACGC ACGGCACCTTCGGACATGGTTGTGGGGGTTGCTCCGGCGCGGTCCATTCTTGGCATTCACTGGCACTGGTTCTGGCGGCA GGCGGCTGCCCTCCTCATCGGGACGGTCATCGTGGCGGCCCCGCTGGTCGCTAAGACGTGGCTCAATGCGACTCCGACCG TCGCCGAAGCCTCCGACTTAATCGTCGTCCTGCTGTCATTCGCGGCTTTGGTGGCCGTTGCTCACCTCGTGGCCGCGATG GTGTCCCACCCCATCGTGTGGCTGGTGGCACCTGTTGTGTGCATCGTCCTGGTCGAAATGCCGATCGTCGTCAACGGAAA TCTCCTTGCCAACACGGGGCATGGCTCGGTGACCTTTGCATGGTCTTTAGGAATGTCGGAACCGGGTGGCACCCACACCG TCACGGTCGCGGCCGTGGTCATGCGCGCCATCTTCTTCTGCATCGTCACCTTGTCCTGTATCCTCACCGCCAGCCGTTGG TCCAGGGTCCGTGCCGACAGGTTCTGCTGGCGTCGAGTGATGCCTTGTGTGGCCTTGATCGCCCCACCGCTCATCATTGC TGCCGTGGGCGTCGTCTTGCCGGTGCCGTTGTTTCGTGATGCGCCACTAGCCTTTGAGTGTTCGTCGCACGAAGGTGTGC GGGTATGCGTCACGCCAGCACATCGGAGTCTCGCGGCGTCCTACGCGAAACCCGCTCAACGCGTCTTGTCTGTCCTGCCG CAAACGGTGGTTTCCCGTGACGTCCTGCTTGCTGAGTCTGGGTACCAAACATACAGGGGGCAACGTGTGATTGATCTCGG CCGACCGACCTCACATGGCTCTAGACAACAAATGTCGGATCTGACGGGTGAGGGGCTGGCTCAATCATTTTCAGGCCGGG ACGCATGTGCTTTTATGCGTGAGACCGGAGGGTCGGAGTTGACATCTCAGCAGATGGGGGCCCTCAATGGCGTCGATTCC GTGGAACGTACCATTCTTCGGCTGGCTGGATTTCAGCATGATGATGCGACGAGTTCGGAACGAAATGGCCTTGACGGCAT GGATGTAACCGCATTCCGTCATTGGTATACGGAGCATCATCATGCGGTAAGCACGTGTTCATTGACCTCCAGTGATCTTC ACCGATGA
Upstream 100 bases:
>100_bases GCTCGTATTCCGAACTGGAATCTGTTGGCCGAGGGCACCCAGTCCGTAATACCAACGATGCTGAGGCTGGATACCTCACT CTTCTCGGGGGCGCAGCGTG
Downstream 100 bases:
>100_bases GAGGCGTAGCGACTTTCCTGAAGGGGCGCCATGCTAGTGCCCTTGTCATTGCGCCGCTTGTGGCCTTGCTCGTGGCCTTC TTCCTGTGGAAGGCGAGTCT
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MLTSLQGIRPLRGFHRMAFPFTSWHMVLVTVGGAMCSFIALRGRWAWGLWQVQDVAVTLLESSMLWGIVAGLMGAGLAAR TAPSDMVVGVAPARSILGIHWHWFWRQAAALLIGTVIVAAPLVAKTWLNATPTVAEASDLIVVLLSFAALVAVAHLVAAM VSHPIVWLVAPVVCIVLVEMPIVVNGNLLANTGHGSVTFAWSLGMSEPGGTHTVTVAAVVMRAIFFCIVTLSCILTASRW SRVRADRFCWRRVMPCVALIAPPLIIAAVGVVLPVPLFRDAPLAFECSSHEGVRVCVTPAHRSLAASYAKPAQRVLSVLP QTVVSRDVLLAESGYQTYRGQRVIDLGRPTSHGSRQQMSDLTGEGLAQSFSGRDACAFMRETGGSELTSQQMGALNGVDS VERTILRLAGFQHDDATSSERNGLDGMDVTAFRHWYTEHHHAVSTCSLTSSDLHR
Sequences:
>Translated_455_residues MLTSLQGIRPLRGFHRMAFPFTSWHMVLVTVGGAMCSFIALRGRWAWGLWQVQDVAVTLLESSMLWGIVAGLMGAGLAAR TAPSDMVVGVAPARSILGIHWHWFWRQAAALLIGTVIVAAPLVAKTWLNATPTVAEASDLIVVLLSFAALVAVAHLVAAM VSHPIVWLVAPVVCIVLVEMPIVVNGNLLANTGHGSVTFAWSLGMSEPGGTHTVTVAAVVMRAIFFCIVTLSCILTASRW SRVRADRFCWRRVMPCVALIAPPLIIAAVGVVLPVPLFRDAPLAFECSSHEGVRVCVTPAHRSLAASYAKPAQRVLSVLP QTVVSRDVLLAESGYQTYRGQRVIDLGRPTSHGSRQQMSDLTGEGLAQSFSGRDACAFMRETGGSELTSQQMGALNGVDS VERTILRLAGFQHDDATSSERNGLDGMDVTAFRHWYTEHHHAVSTCSLTSSDLHR >Mature_455_residues MLTSLQGIRPLRGFHRMAFPFTSWHMVLVTVGGAMCSFIALRGRWAWGLWQVQDVAVTLLESSMLWGIVAGLMGAGLAAR TAPSDMVVGVAPARSILGIHWHWFWRQAAALLIGTVIVAAPLVAKTWLNATPTVAEASDLIVVLLSFAALVAVAHLVAAM VSHPIVWLVAPVVCIVLVEMPIVVNGNLLANTGHGSVTFAWSLGMSEPGGTHTVTVAAVVMRAIFFCIVTLSCILTASRW SRVRADRFCWRRVMPCVALIAPPLIIAAVGVVLPVPLFRDAPLAFECSSHEGVRVCVTPAHRSLAASYAKPAQRVLSVLP QTVVSRDVLLAESGYQTYRGQRVIDLGRPTSHGSRQQMSDLTGEGLAQSFSGRDACAFMRETGGSELTSQQMGALNGVDS VERTILRLAGFQHDDATSSERNGLDGMDVTAFRHWYTEHHHAVSTCSLTSSDLHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49014; Mature: 49014
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSLQGIRPLRGFHRMAFPFTSWHMVLVTVGGAMCSFIALRGRWAWGLWQVQDVAVTLL CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHH ESSMLWGIVAGLMGAGLAARTAPSDMVVGVAPARSILGIHWHWFWRQAAALLIGTVIVAA HHHHHHHHHHHHHHCCCHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLVAKTWLNATPTVAEASDLIVVLLSFAALVAVAHLVAAMVSHPIVWLVAPVVCIVLVEM HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC PIVVNGNLLANTGHGSVTFAWSLGMSEPGGTHTVTVAAVVMRAIFFCIVTLSCILTASRW CEEEECCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRVRADRFCWRRVMPCVALIAPPLIIAAVGVVLPVPLFRDAPLAFECSSHEGVRVCVTPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEECCC HRSLAASYAKPAQRVLSVLPQTVVSRDVLLAESGYQTYRGQRVIDLGRPTSHGSRQQMSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCEEEECCCCCCCCCHHHHHH LTGEGLAQSFSGRDACAFMRETGGSELTSQQMGALNGVDSVERTILRLAGFQHDDATSSE CCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC RNGLDGMDVTAFRHWYTEHHHAVSTCSLTSSDLHR CCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHCCC >Mature Secondary Structure MLTSLQGIRPLRGFHRMAFPFTSWHMVLVTVGGAMCSFIALRGRWAWGLWQVQDVAVTLL CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHH ESSMLWGIVAGLMGAGLAARTAPSDMVVGVAPARSILGIHWHWFWRQAAALLIGTVIVAA HHHHHHHHHHHHHHCCCHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLVAKTWLNATPTVAEASDLIVVLLSFAALVAVAHLVAAMVSHPIVWLVAPVVCIVLVEM HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC PIVVNGNLLANTGHGSVTFAWSLGMSEPGGTHTVTVAAVVMRAIFFCIVTLSCILTASRW CEEEECCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRVRADRFCWRRVMPCVALIAPPLIIAAVGVVLPVPLFRDAPLAFECSSHEGVRVCVTPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEECCC HRSLAASYAKPAQRVLSVLPQTVVSRDVLLAESGYQTYRGQRVIDLGRPTSHGSRQQMSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCEEEECCCCCCCCCHHHHHH LTGEGLAQSFSGRDACAFMRETGGSELTSQQMGALNGVDSVERTILRLAGFQHDDATSSE CCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC RNGLDGMDVTAFRHWYTEHHHAVSTCSLTSSDLHR CCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA