| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843527
Identifier: 50843527
GI number: 50843527
Start: 2262771
End: 2263454
Strand: Direct
Name: 50843527
Synonym: PPA2088
Alternate gene names: NA
Gene position: 2262771-2263454 (Clockwise)
Preceding gene: 50843526
Following gene: 50843534
Centisome position: 88.38
GC content: 64.33
Gene sequence:
>684_bases GTGGGCATCGGAAGCAACATCGGCAAGGCACTGTTGGCCCAAGCCCCCGACATGGCACCCGGCGCAGCTGTCTCACTACT ACGCAGCATCCTCGGATTCGCTATCGACGGCGCCTCAGGGCTGCCGGGAGCGCGTCAGGCTGCCGGCAAGACGCTCACCA AGCACGAGGGCGATATTGAGCAGGCGATCAGCTCCTTAGTCAATCAGCACATTGCGATGGCCGGGGCCCAGGGGTTCGTC TCCAACCTCGGTGGCGTCGTCACTCTGGCCGTGACTATCCCCGCCAATATCTCCGGCGTTGCGATCGTGCAAGCCCGCAT GGTGGCTGCCATCGCCCACCTGCGCGGGTACGATCTCGACGACCAGCGGGTCCGCACCGCCATCCTCGCCACTCTCATGG GTCAGCGCGAGGTCGATAGCCTCGTCCACGAGGAGAAGCTACCGACGACACCGATGGGCATCGCTACCGCTCCAGTCGGT GACGCCGATCTCGAAAAGGTCGTCGCCCGGAACCTCGTCAATGTCCTTATGGGGCAGGTCGCAGGTAAGAAGCTGCCTGT GTTCGTCTCCAAGCGCGTTCCTGTACTTGGCGGCGGAGTCGGTGCCACCGCTGACGGATTCACCACGTGGAGCGTGGCCC GCTACGCCCGTAAGCAATTCCCCACCCGCCGTCCACGCACCTGA
Upstream 100 bases:
>100_bases TCCTCGACGTGCATTCTCACACCATCGCACGGCGAACATCCACCGATCCGCTGCCCAAGCACGGCTACCCTGGAACTCAG TTGAGTGAGAGGAGACCCGC
Downstream 100 bases:
>100_bases GACCCGCACACTCGGGATACGGCCAGGACGATTCGGGGGCAGGAATAGTGGCGTCCGACCACAGTGACAGGATCTGGCCG GGATTCAACGACGCAGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MGIGSNIGKALLAQAPDMAPGAAVSLLRSILGFAIDGASGLPGARQAAGKTLTKHEGDIEQAISSLVNQHIAMAGAQGFV SNLGGVVTLAVTIPANISGVAIVQARMVAAIAHLRGYDLDDQRVRTAILATLMGQREVDSLVHEEKLPTTPMGIATAPVG DADLEKVVARNLVNVLMGQVAGKKLPVFVSKRVPVLGGGVGATADGFTTWSVARYARKQFPTRRPRT
Sequences:
>Translated_227_residues MGIGSNIGKALLAQAPDMAPGAAVSLLRSILGFAIDGASGLPGARQAAGKTLTKHEGDIEQAISSLVNQHIAMAGAQGFV SNLGGVVTLAVTIPANISGVAIVQARMVAAIAHLRGYDLDDQRVRTAILATLMGQREVDSLVHEEKLPTTPMGIATAPVG DADLEKVVARNLVNVLMGQVAGKKLPVFVSKRVPVLGGGVGATADGFTTWSVARYARKQFPTRRPRT >Mature_226_residues GIGSNIGKALLAQAPDMAPGAAVSLLRSILGFAIDGASGLPGARQAAGKTLTKHEGDIEQAISSLVNQHIAMAGAQGFVS NLGGVVTLAVTIPANISGVAIVQARMVAAIAHLRGYDLDDQRVRTAILATLMGQREVDSLVHEEKLPTTPMGIATAPVGD ADLEKVVARNLVNVLMGQVAGKKLPVFVSKRVPVLGGGVGATADGFTTWSVARYARKQFPTRRPRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23463; Mature: 23331
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIGSNIGKALLAQAPDMAPGAAVSLLRSILGFAIDGASGLPGARQAAGKTLTKHEGDIE CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHCCCCHH QAISSLVNQHIAMAGAQGFVSNLGGVVTLAVTIPANISGVAIVQARMVAAIAHLRGYDLD HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC DQRVRTAILATLMGQREVDSLVHEEKLPTTPMGIATAPVGDADLEKVVARNLVNVLMGQV HHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHH AGKKLPVFVSKRVPVLGGGVGATADGFTTWSVARYARKQFPTRRPRT CCCCCCEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GIGSNIGKALLAQAPDMAPGAAVSLLRSILGFAIDGASGLPGARQAAGKTLTKHEGDIE CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHCCCCHH QAISSLVNQHIAMAGAQGFVSNLGGVVTLAVTIPANISGVAIVQARMVAAIAHLRGYDLD HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC DQRVRTAILATLMGQREVDSLVHEEKLPTTPMGIATAPVGDADLEKVVARNLVNVLMGQV HHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHH AGKKLPVFVSKRVPVLGGGVGATADGFTTWSVARYARKQFPTRRPRT CCCCCCEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA