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The map label for this gene is opuAC [H]

Identifier: 50843463

GI number: 50843463

Start: 2188740

End: 2189783

Strand: Reverse

Name: opuAC [H]

Synonym: PPA2017

Alternate gene names: 50843463

Gene position: 2189783-2188740 (Counterclockwise)

Preceding gene: 50843465

Following gene: 50843462

Centisome position: 85.53

GC content: 58.24

Gene sequence:

>1044_bases
ATGATGTCGCACGGTGTGGCAGCCATAGCGTTCTTGGCAGGCCTGATCGGGTTGGGACTTGCGGGGTGTTCCGGGACAGC
CGGGGTCTACAACAGTGGTGACGAGGCGGCCAACGGATCACGTTCGGGAGTTGAGGCGACCCCCGAGGCCCATGCAGGTG
CTACGCCTGACCAGAAGTGGACCCATTGCACCCCAGGAGCTCGTTCCAAGGACATCACCGCAATGAAGCCCGATACCAAC
ACCTCCCTGACGATCGGTGCGTTCAACGGATGGGATGAGTCCTGGGCGACAGCTGGTCTCATCAAGCAAGTCCTCAAGAA
GGACGGCTACACCGTCACCATTAAAGGATTTGACGCCGGGGTCGGGTATCAGGCGACTGCTGGCGGTGACATCGACATCA
TCACTGATTCCTGGCTTCCGGTGACCCAGGCTGGCTACATCCGCAAGTACGGCCCGAAGTTGGAGAATCTCGGGTGCTGG
TACGACAATGCGAAACTCACTATTGTCGTGAATAAAAACTCACCGGCACATTCCATCGCCGATCTCAAGAAAACTGGTAG
CGCTTACGGGAACGTCATTTACAGCATTGAACCGGGTGCCGAGATGACGAAGACCATCGCTCATCAGACGTTGCCGATGT
ACGGGTTGTCGAACATTACCCTCAAGACCTCGTCGACGCCGGCGATGCTGGCCCAGCTCCAGAAAGCCACCAAGGCAGGG
AATAACGTCGCGGTCACTCTCTGGCGGCCGCACTGGGCTTATGATGCTTACCCGGTACGCGATCTCGATGATCCCAAGAA
CGCCATCTCCAACGCGGAGCTCATTTACAGTTTCGGTCGCCCCGGATTTGAGAAGGACCATCCCAAGGCCGCTCAGCTCA
TCCGGAACCTCGCAATCGACGACGCCCACCTGTCTAGTCTGGAGCACCTCATGGTCGATACCACTAAGCGTGGTGGCCAG
GAGGACACTGCGATCTCGAGGTGGATGGCCGATAATTCGGACTGGGTGCACGATTGGCTGGCCGGAAGGCTGGGGTCTCG
ATGA

Upstream 100 bases:

>100_bases
CAGGCTGGGTGTCGCCCGGCGCGGACTACAGTCGGCACCGGCCCTCCGACGAGATTCTGAAGGCTTGCGCCACATCGGGC
GCTGGATGGATGGGAGATGG

Downstream 100 bases:

>100_bases
GCCGACTTCTGCCCGACCCGGACGTGGCGGGAGCGTGGATGGTGCGCGTCGGTGACGCGGATCAGTCGTGGATCGATCCC
GACGATCCCACCCGTCTGGA

Product: periplasmic binding protein of proline/glycine betaine transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MMSHGVAAIAFLAGLIGLGLAGCSGTAGVYNSGDEAANGSRSGVEATPEAHAGATPDQKWTHCTPGARSKDITAMKPDTN
TSLTIGAFNGWDESWATAGLIKQVLKKDGYTVTIKGFDAGVGYQATAGGDIDIITDSWLPVTQAGYIRKYGPKLENLGCW
YDNAKLTIVVNKNSPAHSIADLKKTGSAYGNVIYSIEPGAEMTKTIAHQTLPMYGLSNITLKTSSTPAMLAQLQKATKAG
NNVAVTLWRPHWAYDAYPVRDLDDPKNAISNAELIYSFGRPGFEKDHPKAAQLIRNLAIDDAHLSSLEHLMVDTTKRGGQ
EDTAISRWMADNSDWVHDWLAGRLGSR

Sequences:

>Translated_347_residues
MMSHGVAAIAFLAGLIGLGLAGCSGTAGVYNSGDEAANGSRSGVEATPEAHAGATPDQKWTHCTPGARSKDITAMKPDTN
TSLTIGAFNGWDESWATAGLIKQVLKKDGYTVTIKGFDAGVGYQATAGGDIDIITDSWLPVTQAGYIRKYGPKLENLGCW
YDNAKLTIVVNKNSPAHSIADLKKTGSAYGNVIYSIEPGAEMTKTIAHQTLPMYGLSNITLKTSSTPAMLAQLQKATKAG
NNVAVTLWRPHWAYDAYPVRDLDDPKNAISNAELIYSFGRPGFEKDHPKAAQLIRNLAIDDAHLSSLEHLMVDTTKRGGQ
EDTAISRWMADNSDWVHDWLAGRLGSR
>Mature_347_residues
MMSHGVAAIAFLAGLIGLGLAGCSGTAGVYNSGDEAANGSRSGVEATPEAHAGATPDQKWTHCTPGARSKDITAMKPDTN
TSLTIGAFNGWDESWATAGLIKQVLKKDGYTVTIKGFDAGVGYQATAGGDIDIITDSWLPVTQAGYIRKYGPKLENLGCW
YDNAKLTIVVNKNSPAHSIADLKKTGSAYGNVIYSIEPGAEMTKTIAHQTLPMYGLSNITLKTSSTPAMLAQLQKATKAG
NNVAVTLWRPHWAYDAYPVRDLDDPKNAISNAELIYSFGRPGFEKDHPKAAQLIRNLAIDDAHLSSLEHLMVDTTKRGGQ
EDTAISRWMADNSDWVHDWLAGRLGSR

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 37138; Mature: 37138

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSHGVAAIAFLAGLIGLGLAGCSGTAGVYNSGDEAANGSRSGVEATPEAHAGATPDQKW
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
THCTPGARSKDITAMKPDTNTSLTIGAFNGWDESWATAGLIKQVLKKDGYTVTIKGFDAG
CCCCCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCC
VGYQATAGGDIDIITDSWLPVTQAGYIRKYGPKLENLGCWYDNAKLTIVVNKNSPAHSIA
CCEEECCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCEEECCCEEEEEEECCCCHHHHH
DLKKTGSAYGNVIYSIEPGAEMTKTIAHQTLPMYGLSNITLKTSSTPAMLAQLQKATKAG
HHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCC
NNVAVTLWRPHWAYDAYPVRDLDDPKNAISNAELIYSFGRPGFEKDHPKAAQLIRNLAID
CCEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCC
DAHLSSLEHLMVDTTKRGGQEDTAISRWMADNSDWVHDWLAGRLGSR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MMSHGVAAIAFLAGLIGLGLAGCSGTAGVYNSGDEAANGSRSGVEATPEAHAGATPDQKW
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
THCTPGARSKDITAMKPDTNTSLTIGAFNGWDESWATAGLIKQVLKKDGYTVTIKGFDAG
CCCCCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCC
VGYQATAGGDIDIITDSWLPVTQAGYIRKYGPKLENLGCWYDNAKLTIVVNKNSPAHSIA
CCEEECCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCEEECCCEEEEEEECCCCHHHHH
DLKKTGSAYGNVIYSIEPGAEMTKTIAHQTLPMYGLSNITLKTSSTPAMLAQLQKATKAG
HHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCC
NNVAVTLWRPHWAYDAYPVRDLDDPKNAISNAELIYSFGRPGFEKDHPKAAQLIRNLAID
CCEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHCCC
DAHLSSLEHLMVDTTKRGGQEDTAISRWMADNSDWVHDWLAGRLGSR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]