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The map label for this gene is fixC [C]

Identifier: 50843387

GI number: 50843387

Start: 2097889

End: 2099151

Strand: Reverse

Name: fixC [C]

Synonym: PPA1938

Alternate gene names: 50843387

Gene position: 2099151-2097889 (Counterclockwise)

Preceding gene: 50843390

Following gene: 50843386

Centisome position: 81.99

GC content: 60.73

Gene sequence:

>1263_bases
GTGACGAGCCAGATGGAGTCCGACGTCGTCGTCGTCGGTGCTGGGCCTGGTGGCTCAGCGACCGCTGCGCACCTTGCCCG
CAGGGGGCTGCATGTCACCCTGCTGGAGAAGGTGACGTTCCCCCGCGACAAGGTTTGCGGTGATGGCCTGACTCCGCGCG
CCGTCAAGCAGCTCATCCGGCTGGGTATCGACGTCTCCGAAGAGGCTGGCTGGAAACACACGGAGGGGCTGCGGATCCAC
GGTGGACGTATCGCCCCCTTCGTTCTTCCCTGGCCCGAGTTGGCCGACTACCCCAATTTCGGCATGGTGTGTCGACGCAC
GGTTCTTGACGAGCGTTTGGCTCGCCACGCCGAGTCGCAGGGAGTCGCCCTCGTTGAGGGTGCCAATGTCACTGATCCGA
TCCTCGATCTCAGCGGCCGCATTCGCGGCGTCCGGACCTCCGATGGCACCGAGTATTCCGCCCCCGTTGTCGTCGCGGCT
GATGGCAACTCTTCGCGCCTCGGCTTAGCGATGGGCCTGCATAAGCGTGACGACCGTCCGATGGGCGTGGCGGTACGCGC
CTATTACCGCTCTGTGCTGTCTGAGTCGCGTAATTTGGAGAGCTGGCTAGAACTGTGGGACGGTGCCCCGCACAAATCTG
ACCTTTTGCCGGGTTATGGCTGGGCCTTCCCTGAGGGGGATGGAACGGTCAATATCGGTTTGGGAATGCTTGATTCCTCT
GCCGCGTTTGGTCGCACTGATTACCGCTCCCTTATGAAACGTTGGCTGTCTCATCTGCCTGCTGAATGGACCCTCGACGA
AGAACACCGGGAGGGGCCGATCCGCGGTGCCGCCCTGCCGATGGCTTTCAATCGTCAACCCCATTATCGCGACGGTTTGC
TACTCGTGGGGGATGCCGGTGGCATGGTCAACCCATTTAATGGCGAGGGCATCGACTACGCCATGGAGGCCGGTGAGATG
GCGGCTGATGCTATCGCTGAGGCTCATTACCGTGGTCACCGGACTCCGGCTGCTGAGAAGGCACTCCAGGGATATTCGCG
CGCTCTGCAATGCCACTTCGGTGGTTATTACCGGCTGGGGACGATCTTCGTGCGGCTCATCGGCGATCCGCGTGTCATGA
AGGTGTGCACGACGTACGGGCTCCCTCGTCGTCGACTCATGAGGTTTGTCAACAAATTGTTGGCAAACCTTACTGATGCT
AAAGCTGGAGATCTTGATGACCGTATTATCAACATTCTGACGAGGATTGCCCCGTCGGTGTGA

Upstream 100 bases:

>100_bases
CTTTCGGTTTCGTGAACCTGATGCGGCGACGCGCATGTAGCCGATAACCCCTAGACTCGCCCGTGCAGATCGTCGGTGTG
CGTTAATGAGGAGGGTCCAC

Downstream 100 bases:

>100_bases
GCTTGTGGCCTGCGGCAGAATTCACGTGCCGCCAAGCCTGAAGTTAGGTAACCCAAAGTACCAGGGTGTCAGATCAGAGT
CGTATGGTCTGAACGAATGG

Product: putative electron transfer oxidoreductase

Products: NA

Alternate protein names: DGGGPL reductase 1; 2,3-di-O-geranylgeranylglyceryl phosphate reductase 1; Geranylgeranyl reductase 1; GGR 1 [H]

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MTSQMESDVVVVGAGPGGSATAAHLARRGLHVTLLEKVTFPRDKVCGDGLTPRAVKQLIRLGIDVSEEAGWKHTEGLRIH
GGRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQGVALVEGANVTDPILDLSGRIRGVRTSDGTEYSAPVVVAA
DGNSSRLGLAMGLHKRDDRPMGVAVRAYYRSVLSESRNLESWLELWDGAPHKSDLLPGYGWAFPEGDGTVNIGLGMLDSS
AAFGRTDYRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDGLLLVGDAGGMVNPFNGEGIDYAMEAGEM
AADAIAEAHYRGHRTPAAEKALQGYSRALQCHFGGYYRLGTIFVRLIGDPRVMKVCTTYGLPRRRLMRFVNKLLANLTDA
KAGDLDDRIINILTRIAPSV

Sequences:

>Translated_420_residues
MTSQMESDVVVVGAGPGGSATAAHLARRGLHVTLLEKVTFPRDKVCGDGLTPRAVKQLIRLGIDVSEEAGWKHTEGLRIH
GGRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQGVALVEGANVTDPILDLSGRIRGVRTSDGTEYSAPVVVAA
DGNSSRLGLAMGLHKRDDRPMGVAVRAYYRSVLSESRNLESWLELWDGAPHKSDLLPGYGWAFPEGDGTVNIGLGMLDSS
AAFGRTDYRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDGLLLVGDAGGMVNPFNGEGIDYAMEAGEM
AADAIAEAHYRGHRTPAAEKALQGYSRALQCHFGGYYRLGTIFVRLIGDPRVMKVCTTYGLPRRRLMRFVNKLLANLTDA
KAGDLDDRIINILTRIAPSV
>Mature_419_residues
TSQMESDVVVVGAGPGGSATAAHLARRGLHVTLLEKVTFPRDKVCGDGLTPRAVKQLIRLGIDVSEEAGWKHTEGLRIHG
GRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQGVALVEGANVTDPILDLSGRIRGVRTSDGTEYSAPVVVAAD
GNSSRLGLAMGLHKRDDRPMGVAVRAYYRSVLSESRNLESWLELWDGAPHKSDLLPGYGWAFPEGDGTVNIGLGMLDSSA
AFGRTDYRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDGLLLVGDAGGMVNPFNGEGIDYAMEAGEMA
ADAIAEAHYRGHRTPAAEKALQGYSRALQCHFGGYYRLGTIFVRLIGDPRVMKVCTTYGLPRRRLMRFVNKLLANLTDAK
AGDLDDRIINILTRIAPSV

Specific function: Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. DGGGPL reductase subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR011777
- InterPro:   IPR003042 [H]

Pfam domain/function: PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 45919; Mature: 45788

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQMESDVVVVGAGPGGSATAAHLARRGLHVTLLEKVTFPRDKVCGDGLTPRAVKQLIR
CCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEHHHHCCCCHHHCCCCCCHHHHHHHHH
LGIDVSEEAGWKHTEGLRIHGGRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQ
HCCCCCCCCCCCCCCCEEEECCEECCEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
GVALVEGANVTDPILDLSGRIRGVRTSDGTEYSAPVVVAADGNSSRLGLAMGLHKRDDRP
CEEEEECCCCCCHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCC
MGVAVRAYYRSVLSESRNLESWLELWDGAPHKSDLLPGYGWAFPEGDGTVNIGLGMLDSS
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC
AAFGRTDYRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDGLLLVGDAG
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCEEECCCCCCCCCEEEEECCC
GMVNPFNGEGIDYAMEAGEMAADAIAEAHYRGHRTPAAEKALQGYSRALQCHFGGYYRLG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEHHCCCCHHHH
TIFVRLIGDPRVMKVCTTYGLPRRRLMRFVNKLLANLTDAKAGDLDDRIINILTRIAPSV
HHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSQMESDVVVVGAGPGGSATAAHLARRGLHVTLLEKVTFPRDKVCGDGLTPRAVKQLIR
CCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEHHHHCCCCHHHCCCCCCHHHHHHHHH
LGIDVSEEAGWKHTEGLRIHGGRIAPFVLPWPELADYPNFGMVCRRTVLDERLARHAESQ
HCCCCCCCCCCCCCCCEEEECCEECCEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
GVALVEGANVTDPILDLSGRIRGVRTSDGTEYSAPVVVAADGNSSRLGLAMGLHKRDDRP
CEEEEECCCCCCHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCC
MGVAVRAYYRSVLSESRNLESWLELWDGAPHKSDLLPGYGWAFPEGDGTVNIGLGMLDSS
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC
AAFGRTDYRSLMKRWLSHLPAEWTLDEEHREGPIRGAALPMAFNRQPHYRDGLLLVGDAG
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCEEECCCCCCCCCEEEEECCC
GMVNPFNGEGIDYAMEAGEMAADAIAEAHYRGHRTPAAEKALQGYSRALQCHFGGYYRLG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEHHCCCCHHHH
TIFVRLIGDPRVMKVCTTYGLPRRRLMRFVNKLLANLTDAKAGDLDDRIINILTRIAPSV
HHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on NADH or NADPH; With a quinone or similar compound as acceptor [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA