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The map label for this gene is nuoJ [H]

Identifier: 50843377

GI number: 50843377

Start: 2087319

End: 2088173

Strand: Reverse

Name: nuoJ [H]

Synonym: PPA1926

Alternate gene names: 50843377

Gene position: 2088173-2087319 (Counterclockwise)

Preceding gene: 50843378

Following gene: 50843376

Centisome position: 81.56

GC content: 60.12

Gene sequence:

>855_bases
ATGACTACGGGACTCCCCCTGCTCGCCGGTCTCGTACCTATGGTGACGGCATCCCAGTGGGCCTTCTGGCTGTTGGCACC
GATCATGGTGCTTGCGGCCTTGGTGATGGTTTTTGCCAAGAAGCCTGTCCACTCGGCGTTGTCGCTGGCCGTAGTCATGA
TTTGTCTGGCCGTGCAGTACGCCAGCCAGGAAGCGCCTTTCCTTTTCGTGGTGCAGATCATCGTCTACACCGGCGCCATC
CTGATGCTCTTCCTCTTTGTCGTCATGCTTGTCGGCGTCGACTCCACCGACTCCCTCAAAGAGACCCTCAAGGGTCACAA
GGTGGCCGCCATGATCGCCGCCTTGGCCTTTGTGGTGCTGCTGATCCTGGCTGTCGGTAATGCAGTGACGACCGGTGTTA
TCGGCACTGACTATCCGGTGGGCCTGGGGCAGGCCAACACAGCTGGTGGGAATAACGTCAAGTCGCTTGCCGAGCTGGTG
TTTACCAAGTATGTCATCGTCTTTGAGGCTACTTCGGCCTTGCTCATCACTGCTGCCGTCGGCACGATGGTGTTGGCTCA
TGGCGAGGCCGACAAGAAGAAGTCCCAGCGTGAACGGGTGACAGACCGTATGGCTGCCTACGCCGAGCATGGCTCTCACC
CCGGTGTTCGTCCCAACTCCGGTGTCTACGCCCGCACGAATCAGATTGGTGCTCCGGCTCTGCTGCCTGACGGCACGGTG
GCTCAGGACTCGATCTCGGGAACCTTGGCGACCCGCGGTGCCATTATCGACGCCGGTGAGTTGAAGGCTCCGACGCATCG
GGCGTTTGCGTCAATCAGTGCCGCCCGCCACGAGGTCCAAGGAGAACTCGAATGA

Upstream 100 bases:

>100_bases
CTGGGCAGGACGACGTACGGACCGGTCCGGCCAATAGTGGTGCCACTGCGCACCGGGACGATGACAACGACACCCAACAC
AAGGATGAGGAGGCCGCCTG

Downstream 100 bases:

>100_bases
ATCCGAATGACTACCTGGTGCTCTCGGCGATCTTGTTCGCTATCGGCATCGTGGGCTTCCTGACGAGGCGTAATGCCTTG
GTGGCTTTTATGTCGGTGGA

Product: NADH dehydrogenase subunit J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTTGLPLLAGLVPMVTASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQYASQEAPFLFVVQIIVYTGAI
LMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVLLILAVGNAVTTGVIGTDYPVGLGQANTAGGNNVKSLAELV
FTKYVIVFEATSALLITAAVGTMVLAHGEADKKKSQRERVTDRMAAYAEHGSHPGVRPNSGVYARTNQIGAPALLPDGTV
AQDSISGTLATRGAIIDAGELKAPTHRAFASISAARHEVQGELE

Sequences:

>Translated_284_residues
MTTGLPLLAGLVPMVTASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQYASQEAPFLFVVQIIVYTGAI
LMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVLLILAVGNAVTTGVIGTDYPVGLGQANTAGGNNVKSLAELV
FTKYVIVFEATSALLITAAVGTMVLAHGEADKKKSQRERVTDRMAAYAEHGSHPGVRPNSGVYARTNQIGAPALLPDGTV
AQDSISGTLATRGAIIDAGELKAPTHRAFASISAARHEVQGELE
>Mature_283_residues
TTGLPLLAGLVPMVTASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQYASQEAPFLFVVQIIVYTGAIL
MLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVLLILAVGNAVTTGVIGTDYPVGLGQANTAGGNNVKSLAELVF
TKYVIVFEATSALLITAAVGTMVLAHGEADKKKSQRERVTDRMAAYAEHGSHPGVRPNSGVYARTNQIGAPALLPDGTVA
QDSISGTLATRGAIIDAGELKAPTHRAFASISAARHEVQGELE

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 29693; Mature: 29562

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGLPLLAGLVPMVTASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ASQEAPFLFVVQIIVYTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
LILAVGNAVTTGVIGTDYPVGLGQANTAGGNNVKSLAELVFTKYVIVFEATSALLITAAV
HHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTMVLAHGEADKKKSQRERVTDRMAAYAEHGSHPGVRPNSGVYARTNQIGAPALLPDGTV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
AQDSISGTLATRGAIIDAGELKAPTHRAFASISAARHEVQGELE
CHHHHCHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTGLPLLAGLVPMVTASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ASQEAPFLFVVQIIVYTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
LILAVGNAVTTGVIGTDYPVGLGQANTAGGNNVKSLAELVFTKYVIVFEATSALLITAAV
HHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTMVLAHGEADKKKSQRERVTDRMAAYAEHGSHPGVRPNSGVYARTNQIGAPALLPDGTV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
AQDSISGTLATRGAIIDAGELKAPTHRAFASISAARHEVQGELE
CHHHHCHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]