| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843369
Identifier: 50843369
GI number: 50843369
Start: 2078618
End: 2079049
Strand: Direct
Name: 50843369
Synonym: PPA1918
Alternate gene names: NA
Gene position: 2078618-2079049 (Clockwise)
Preceding gene: 50843368
Following gene: 50843388
Centisome position: 81.19
GC content: 59.72
Gene sequence:
>432_bases GTGTCCATTCTGGTTTTTGGTTGGGTGTTCTGCATCCTCTCGCACAGCGATCCCGTCTTATTCACCAACGCCTTCGTGAT CGTTGTGGTCGGCGTCCTTGGGTCCTACCTCATCCATGAGATCGGCCACTGGTTGGCCTTGTCGGTCACATCTCCGGATG CCGAAGCTCGCTGGGAGTCGACCCTGCTGCGAATCTCCCTTATCGTTCGCGGTAGCTCATCCCCGCGAGCAATCGCGGTC AATGCGGCTGCCGGCCCCCTAGCGTGCGTCGCGTTGGGTGCTCTTACCTTGCTCATCGGTGGTGGTCTTCCGTCTGAAGC GAGGAGCACCGTGAGGGTGATCGGATGGATCTACGTGGCACACGCGGTATTCCTCATCCCGCCATCAACAGATGGCAACA CCGTTCTGGCGTCCCTCATGCACCACCGCTGA
Upstream 100 bases:
>100_bases CGTGAGTCGCTGCTCCACTGAACCACCAACTTGGGCATCTGCCCGTCACGTGCGTCCGTGGCCCTTATGCCATCACGTAG CCGTGGCGGGGAGCATTCCC
Downstream 100 bases:
>100_bases CGGCCACGATCTCACATCACCCTCGTGCCTCGATCGCCTCAGCCATCGCCAGGGCTCGACGAGCAGTATCGACGTGAAGG TTCTCAATCATGCGGCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSILVFGWVFCILSHSDPVLFTNAFVIVVVGVLGSYLIHEIGHWLALSVTSPDAEARWESTLLRISLIVRGSSSPRAIAV NAAAGPLACVALGALTLLIGGGLPSEARSTVRVIGWIYVAHAVFLIPPSTDGNTVLASLMHHR
Sequences:
>Translated_143_residues MSILVFGWVFCILSHSDPVLFTNAFVIVVVGVLGSYLIHEIGHWLALSVTSPDAEARWESTLLRISLIVRGSSSPRAIAV NAAAGPLACVALGALTLLIGGGLPSEARSTVRVIGWIYVAHAVFLIPPSTDGNTVLASLMHHR >Mature_142_residues SILVFGWVFCILSHSDPVLFTNAFVIVVVGVLGSYLIHEIGHWLALSVTSPDAEARWESTLLRISLIVRGSSSPRAIAVN AAAGPLACVALGALTLLIGGGLPSEARSTVRVIGWIYVAHAVFLIPPSTDGNTVLASLMHHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15123; Mature: 14992
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: PS00670 D_2_HYDROXYACID_DH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILVFGWVFCILSHSDPVLFTNAFVIVVVGVLGSYLIHEIGHWLALSVTSPDAEARWES CEEHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHH TLLRISLIVRGSSSPRAIAVNAAAGPLACVALGALTLLIGGGLPSEARSTVRVIGWIYVA HHEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH HAVFLIPPSTDGNTVLASLMHHR HEEEEECCCCCCHHHHHHHHHCC >Mature Secondary Structure SILVFGWVFCILSHSDPVLFTNAFVIVVVGVLGSYLIHEIGHWLALSVTSPDAEARWES EEHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHH TLLRISLIVRGSSSPRAIAVNAAAGPLACVALGALTLLIGGGLPSEARSTVRVIGWIYVA HHEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH HAVFLIPPSTDGNTVLASLMHHR HEEEEECCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA