Click here to switch to the map view.

The map label for this gene is 50843334

Identifier: 50843334

GI number: 50843334

Start: 2038194

End: 2039093

Strand: Reverse

Name: 50843334

Synonym: PPA1880

Alternate gene names: NA

Gene position: 2039093-2038194 (Counterclockwise)

Preceding gene: 50843335

Following gene: 50843333

Centisome position: 79.64

GC content: 57.11

Gene sequence:

>900_bases
GTGAAGAAGCATGTCATTGGGGCGAGCTTGACTGGGCTGGCTCTTGCACTTACTCCGTTCGCTGGTGCTGCGTCGGCCCA
CGCAACGCTGCCCGACTATTTTGGTATCGACGCTCCCGACCATGTTGATGTGAATAAGCCACTCAACTTCCGGCTTGACA
AGTGCGATATGGATGGGGCGTCGCAGATTAAATGGGGTGTCGCTAAGGGTGAATCGGCGCCTCCGGAGACGTGGACTACT
GTGAAGGATGAACAGCAGCGGGTTAGTTACACTCCGACCTCCACGGGCACGTACACCATTTGGGCGTACTGTGCCAATGT
TTCTGGTGAGCGCGTTTCGGATAGTGGCAGTTCCTCTTTCACGTCCTACAGCACTAAGGCGACCATGAACCCCACCAAGT
GGGCGGCCGACGAGTATGTCCGGATGGTCACTAAGGGCTTTAACTCTAGCGATACGCTGTCTGCATCGCTGGTTCGTGAT
GGTGATACCAAGGATTATGGTGATCTGCTGGATTCGCAGAGGATCTGGTACCAGTGGGCCAGCGAGACCTCTGATTTCAC
CTTCCCCGGCAATGTTCCCGTGGGTGATTACACTTTGACGTTCACTGATCATGGAAACACCGCTCGGACGGTTCGTGTGC
ATTTGGATCATGGGGCCGGTTACCTGCTGAGTGGCGACACTCCTAAGCCGACGCCGACTCCTACTCCCACGCCGACTCCG
ACTCCTACCCCGAAGCCGACTCCTACCCCGACCCCGGCCCCGACTTCCGGTGAGGCTACTGTCAAGCCGGTTCCGGGTGC
TGCTACTACGTCGGCGGCCACTGTCGTTACTGATGGAAGTGATCAGGGTGTTGTGCGTGTCGCTGGTGGGTTAGGTACTC
TGCCTCATACTGGTGTCTGA

Upstream 100 bases:

>100_bases
CGGGGGGGGGGGGGCAGTATTTCTAGCGCAGTTGCCCGATCCGTGGCTGTCAGAAGAATGTCTGCGGCGCTGTATGGCGC
TTACTGAAAGGTTTCCGATC

Downstream 100 bases:

>100_bases
CAGTTTGAGTTGCTCTTCTTGTCTGTGAAACCCCGCGTCTGAGGACGCGGGGTTCTTCACTATCTGAGACAACATCGAAT
TGTTGCCCATCCGCCTGATG

Product: putative adhesion or S-layer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKKHVIGASLTGLALALTPFAGAASAHATLPDYFGIDAPDHVDVNKPLNFRLDKCDMDGASQIKWGVAKGESAPPETWTT
VKDEQQRVSYTPTSTGTYTIWAYCANVSGERVSDSGSSSFTSYSTKATMNPTKWAADEYVRMVTKGFNSSDTLSASLVRD
GDTKDYGDLLDSQRIWYQWASETSDFTFPGNVPVGDYTLTFTDHGNTARTVRVHLDHGAGYLLSGDTPKPTPTPTPTPTP
TPTPKPTPTPTPAPTSGEATVKPVPGAATTSAATVVTDGSDQGVVRVAGGLGTLPHTGV

Sequences:

>Translated_299_residues
MKKHVIGASLTGLALALTPFAGAASAHATLPDYFGIDAPDHVDVNKPLNFRLDKCDMDGASQIKWGVAKGESAPPETWTT
VKDEQQRVSYTPTSTGTYTIWAYCANVSGERVSDSGSSSFTSYSTKATMNPTKWAADEYVRMVTKGFNSSDTLSASLVRD
GDTKDYGDLLDSQRIWYQWASETSDFTFPGNVPVGDYTLTFTDHGNTARTVRVHLDHGAGYLLSGDTPKPTPTPTPTPTP
TPTPKPTPTPTPAPTSGEATVKPVPGAATTSAATVVTDGSDQGVVRVAGGLGTLPHTGV
>Mature_299_residues
MKKHVIGASLTGLALALTPFAGAASAHATLPDYFGIDAPDHVDVNKPLNFRLDKCDMDGASQIKWGVAKGESAPPETWTT
VKDEQQRVSYTPTSTGTYTIWAYCANVSGERVSDSGSSSFTSYSTKATMNPTKWAADEYVRMVTKGFNSSDTLSASLVRD
GDTKDYGDLLDSQRIWYQWASETSDFTFPGNVPVGDYTLTFTDHGNTARTVRVHLDHGAGYLLSGDTPKPTPTPTPTPTP
TPTPKPTPTPTPAPTSGEATVKPVPGAATTSAATVVTDGSDQGVVRVAGGLGTLPHTGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31502; Mature: 31502

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHVIGASLTGLALALTPFAGAASAHATLPDYFGIDAPDHVDVNKPLNFRLDKCDMDGA
CCCEECCCCHHCEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEECCCCCC
SQIKWGVAKGESAPPETWTTVKDEQQRVSYTPTSTGTYTIWAYCANVSGERVSDSGSSSF
CCEEEEECCCCCCCCCCCCCCCCCCHHEEECCCCCCCEEEEEEEECCCCCEECCCCCCCE
TSYSTKATMNPTKWAADEYVRMVTKGFNSSDTLSASLVRDGDTKDYGDLLDSQRIWYQWA
EECCCEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHCCCEEEEEEC
SETSDFTFPGNVPVGDYTLTFTDHGNTARTVRVHLDHGAGYLLSGDTPKPTPTPTPTPTP
CCCCCEECCCCCCCCCEEEEEECCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCC
TPTPKPTPTPTPAPTSGEATVKPVPGAATTSAATVVTDGSDQGVVRVAGGLGTLPHTGV
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKKHVIGASLTGLALALTPFAGAASAHATLPDYFGIDAPDHVDVNKPLNFRLDKCDMDGA
CCCEECCCCHHCEEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEECCCCCC
SQIKWGVAKGESAPPETWTTVKDEQQRVSYTPTSTGTYTIWAYCANVSGERVSDSGSSSF
CCEEEEECCCCCCCCCCCCCCCCCCHHEEECCCCCCCEEEEEEEECCCCCEECCCCCCCE
TSYSTKATMNPTKWAADEYVRMVTKGFNSSDTLSASLVRDGDTKDYGDLLDSQRIWYQWA
EECCCEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHCCCEEEEEEC
SETSDFTFPGNVPVGDYTLTFTDHGNTARTVRVHLDHGAGYLLSGDTPKPTPTPTPTPTP
CCCCCEECCCCCCCCCEEEEEECCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCCCC
TPTPKPTPTPTPAPTSGEATVKPVPGAATTSAATVVTDGSDQGVVRVAGGLGTLPHTGV
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA