| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is yjeE [C]
Identifier: 50843245
GI number: 50843245
Start: 1947875
End: 1948768
Strand: Reverse
Name: yjeE [C]
Synonym: PPA1785
Alternate gene names: 50843245
Gene position: 1948768-1947875 (Counterclockwise)
Preceding gene: 50843247
Following gene: 50843244
Centisome position: 76.12
GC content: 63.98
Gene sequence:
>894_bases GTGGATAAACAGACCAGCCCGCAAGAGGAGATCCCGGAACTTGCCGTCGCAGTTCCGCAGGACGCCGCGGCTCTTGCGCG CGCCCTTGATCTCGAGGCACAGACTGTTTCGACGTGGCTGACGCAGGGTCTCGGCATTGTTGCCCGCGTCGGTTCCCAGA TTGTCGGTCTAGCTCACCTGGTGGATGACGGTGGCCACGCCGACGTTACCGATCTGGCCCTGACTACCCCTGACGATGCC GACGTCGTTGCAGCCCTCATCGGTGGGGCTGAACAGATCGCTACGGAGCTGGAGTCGCGCGTCCTTGTCGTCTCGGGCCT CAAGGCTTCCCCCGGCCCGGCCTATCACTACAACAGTGGCTGGGTTCGTGTACTACCCACCCGGGTCGTCGTTCCCACCG CTGAGGCTATGCATGCCTTCGGAGCAGCGCTGGCGGCGCAGTTGCGTGCCGGAGACATTGTGCTGGCCTCCGGAGATCTC GGTGCCGGTAAGACCACCTTGGCGCAGGGGATAGGTAGGGGGCTCGGCGTCGATGGGCCCGTTATCTCCCCGACCTTCGT GCTGGCGCGCCGCCACGTCGGATCCGAGGGGCGGCCCGGGTTAGTCCACGTTGACGCTTACCGTCTCGGCTCGGCCGCCG AGCTCATTGACCTTGACCTTGACGAGACTATGGACCAGGCGGTTACTCTCATTGAGTGGGGAGCTGGCATAGCTGAGGAT CTCGGTGGCTCCCACCTCGACGTCGACATCCGTCGCAGCGGGGACCCTGCCGACGAGACCCGTGTAGTTTATTTGGAAGG CTTCGGCCCGCGCTGGCAAGACGTCGACCTGTCGCTGCTGTCCGAACTTCCCCTCGACACCATTTCTCCCGACCAGACCG GAGACAACAACTGA
Upstream 100 bases:
>100_bases GCTCGTGAGAAGGCTTGGGCTGGATCACCTGTCCCGCTGCCTGCCGGAGGACTTGGGACGGCGAGGCTGAGGTGAGGTTC GACGACTATCCTGGGTTCTC
Downstream 100 bases:
>100_bases TGAACATCATCGTCTTGGGAATCGACACGTCGACGGCTGTCAGCGTCGGTTTGGCACGTGGACCTGAGGTGCTCGTCAGC CTGCACTACGACGATCCTCG
Product: nucleotide-binding protein (P-loop hydrolase)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MDKQTSPQEEIPELAVAVPQDAAALARALDLEAQTVSTWLTQGLGIVARVGSQIVGLAHLVDDGGHADVTDLALTTPDDA DVVAALIGGAEQIATELESRVLVVSGLKASPGPAYHYNSGWVRVLPTRVVVPTAEAMHAFGAALAAQLRAGDIVLASGDL GAGKTTLAQGIGRGLGVDGPVISPTFVLARRHVGSEGRPGLVHVDAYRLGSAAELIDLDLDETMDQAVTLIEWGAGIAED LGGSHLDVDIRRSGDPADETRVVYLEGFGPRWQDVDLSLLSELPLDTISPDQTGDNN
Sequences:
>Translated_297_residues MDKQTSPQEEIPELAVAVPQDAAALARALDLEAQTVSTWLTQGLGIVARVGSQIVGLAHLVDDGGHADVTDLALTTPDDA DVVAALIGGAEQIATELESRVLVVSGLKASPGPAYHYNSGWVRVLPTRVVVPTAEAMHAFGAALAAQLRAGDIVLASGDL GAGKTTLAQGIGRGLGVDGPVISPTFVLARRHVGSEGRPGLVHVDAYRLGSAAELIDLDLDETMDQAVTLIEWGAGIAED LGGSHLDVDIRRSGDPADETRVVYLEGFGPRWQDVDLSLLSELPLDTISPDQTGDNN >Mature_297_residues MDKQTSPQEEIPELAVAVPQDAAALARALDLEAQTVSTWLTQGLGIVARVGSQIVGLAHLVDDGGHADVTDLALTTPDDA DVVAALIGGAEQIATELESRVLVVSGLKASPGPAYHYNSGWVRVLPTRVVVPTAEAMHAFGAALAAQLRAGDIVLASGDL GAGKTTLAQGIGRGLGVDGPVISPTFVLARRHVGSEGRPGLVHVDAYRLGSAAELIDLDLDETMDQAVTLIEWGAGIAED LGGSHLDVDIRRSGDPADETRVVYLEGFGPRWQDVDLSLLSELPLDTISPDQTGDNN
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 30879; Mature: 30879
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKQTSPQEEIPELAVAVPQDAAALARALDLEAQTVSTWLTQGLGIVARVGSQIVGLAHL CCCCCCCHHHHHHHEEECCCHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH VDDGGHADVTDLALTTPDDADVVAALIGGAEQIATELESRVLVVSGLKASPGPAYHYNSG HCCCCCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHCCEEEEECCCCCCCCCEEECCC WVRVLPTRVVVPTAEAMHAFGAALAAQLRAGDIVLASGDLGAGKTTLAQGIGRGLGVDGP EEEEECCEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCC VISPTFVLARRHVGSEGRPGLVHVDAYRLGSAAELIDLDLDETMDQAVTLIEWGAGIAED CCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHEEECCHHHHHHHHHHHHHHCCCHHHH LGGSHLDVDIRRSGDPADETRVVYLEGFGPRWQDVDLSLLSELPLDTISPDQTGDNN CCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDKQTSPQEEIPELAVAVPQDAAALARALDLEAQTVSTWLTQGLGIVARVGSQIVGLAHL CCCCCCCHHHHHHHEEECCCHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH VDDGGHADVTDLALTTPDDADVVAALIGGAEQIATELESRVLVVSGLKASPGPAYHYNSG HCCCCCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHCCEEEEECCCCCCCCCEEECCC WVRVLPTRVVVPTAEAMHAFGAALAAQLRAGDIVLASGDLGAGKTTLAQGIGRGLGVDGP EEEEECCEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCC VISPTFVLARRHVGSEGRPGLVHVDAYRLGSAAELIDLDLDETMDQAVTLIEWGAGIAED CCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHEEECCHHHHHHHHHHHHHHCCCHHHH LGGSHLDVDIRRSGDPADETRVVYLEGFGPRWQDVDLSLLSELPLDTISPDQTGDNN CCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]