Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

Click here to switch to the map view.

The map label for this gene is 50843206

Identifier: 50843206

GI number: 50843206

Start: 1907271

End: 1907897

Strand: Direct

Name: 50843206

Synonym: PPA1746

Alternate gene names: NA

Gene position: 1907271-1907897 (Clockwise)

Preceding gene: 50843205

Following gene: 50843218

Centisome position: 74.5

GC content: 64.59

Gene sequence:

>627_bases
ATGAGTCGTCGCACCACGCCCCGACGAGGGCGCCGCACCAGCATCCGTAGGGTCAGTTGCCAGGTTGCCGTGCTCGGATT
GTGTACTGCAACAGGCCTGCTCGCAGGCTGTTCCTTCTCCGACCACACGACCCCGGCACCGTCCGACTCCCGTCCCCCGG
CCCAGCAGCTGGCGTCCCAACCACTGCCATCGTGGATCCCCAGCCCGACCACTGGGCGCAAAGCCACCGGAAGTGTCCAG
CGTCCCGCCCTGTCGTACCAAGGTGTTGAAGTGCGGGTCGATCTCGACCGGGGCAATAGCGTGACGATGAATGTCCACGG
CCCGACCGCCCCTGCGGGGACGAAGGTGGGTGCCGAGGCTGCCGATCTCACCTGGACCGTCACCGTCAGTGACGCCACCG
GCACGATTCCGCTGTCGATCACACAGTTCAACGTGCAAGACGAGGCCGGAAAATACCACTGGGCTCAGCCAGTCAAAGGA
TCCCCGGTCCCGGCCAAGATCAGCAAAGGTCAGAAGGTGACCTTCACGATCCACACCGTCGCCTCCGCGGGCGAAGGCAT
GGTTCGATGGGCGCCTGACGGCAAGCATGTCGTCGCCCTATGGGACTACATCGCCGAGCTTGACTGA

Upstream 100 bases:

>100_bases
CGGTATCCGACAGCCATGCCTCGATGGAAACCGGCCTGGCAGTCATCGGTGCAGCCCTGGACACACGGACCTGGCACCGC
CACCACTGAACGGGAAGAAC

Downstream 100 bases:

>100_bases
CCCCTCAGAACCGTCAGGGGGTCCGAACCATCGGACCCCCTGACGTGTTCCAAGAAACCTCTATGAGGAGCGCGGAATCA
GTGGAAGAAGTGGCGAGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSRRTTPRRGRRTSIRRVSCQVAVLGLCTATGLLAGCSFSDHTTPAPSDSRPPAQQLASQPLPSWIPSPTTGRKATGSVQ
RPALSYQGVEVRVDLDRGNSVTMNVHGPTAPAGTKVGAEAADLTWTVTVSDATGTIPLSITQFNVQDEAGKYHWAQPVKG
SPVPAKISKGQKVTFTIHTVASAGEGMVRWAPDGKHVVALWDYIAELD

Sequences:

>Translated_208_residues
MSRRTTPRRGRRTSIRRVSCQVAVLGLCTATGLLAGCSFSDHTTPAPSDSRPPAQQLASQPLPSWIPSPTTGRKATGSVQ
RPALSYQGVEVRVDLDRGNSVTMNVHGPTAPAGTKVGAEAADLTWTVTVSDATGTIPLSITQFNVQDEAGKYHWAQPVKG
SPVPAKISKGQKVTFTIHTVASAGEGMVRWAPDGKHVVALWDYIAELD
>Mature_207_residues
SRRTTPRRGRRTSIRRVSCQVAVLGLCTATGLLAGCSFSDHTTPAPSDSRPPAQQLASQPLPSWIPSPTTGRKATGSVQR
PALSYQGVEVRVDLDRGNSVTMNVHGPTAPAGTKVGAEAADLTWTVTVSDATGTIPLSITQFNVQDEAGKYHWAQPVKGS
PVPAKISKGQKVTFTIHTVASAGEGMVRWAPDGKHVVALWDYIAELD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22067; Mature: 21936

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRTTPRRGRRTSIRRVSCQVAVLGLCTATGLLAGCSFSDHTTPAPSDSRPPAQQLASQ
CCCCCCCCCCCCCCEEHEEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCC
PLPSWIPSPTTGRKATGSVQRPALSYQGVEVRVDLDRGNSVTMNVHGPTAPAGTKVGAEA
CCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCC
ADLTWTVTVSDATGTIPLSITQFNVQDEAGKYHWAQPVKGSPVPAKISKGQKVTFTIHTV
CCEEEEEEECCCCCEEEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEEE
ASAGEGMVRWAPDGKHVVALWDYIAELD
CCCCCCEEEECCCCCEEEEEEHHHHHCC
>Mature Secondary Structure 
SRRTTPRRGRRTSIRRVSCQVAVLGLCTATGLLAGCSFSDHTTPAPSDSRPPAQQLASQ
CCCCCCCCCCCCCEEHEEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCC
PLPSWIPSPTTGRKATGSVQRPALSYQGVEVRVDLDRGNSVTMNVHGPTAPAGTKVGAEA
CCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCC
ADLTWTVTVSDATGTIPLSITQFNVQDEAGKYHWAQPVKGSPVPAKISKGQKVTFTIHTV
CCEEEEEEECCCCCEEEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEEE
ASAGEGMVRWAPDGKHVVALWDYIAELD
CCCCCCEEEECCCCCEEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA