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The map label for this gene is clpS [H]

Identifier: 50843142

GI number: 50843142

Start: 1832481

End: 1833077

Strand: Reverse

Name: clpS [H]

Synonym: PPA1680

Alternate gene names: 50843142

Gene position: 1833077-1832481 (Counterclockwise)

Preceding gene: 50843145

Following gene: 50843138

Centisome position: 71.6

GC content: 58.29

Gene sequence:

>597_bases
ATGTCTGTAGCCACCGCGGAACCCATGACACACCGCCTTGTCGGCCAGGAATCGACATGGACGACGGTCGTTTGGGACGA
TCCGGTGAACCTCATGGACTACGTGACGATGGTGTTTATGAGATATTTCGGTTACCCGCGCGAACGCGCCACCCAACTCA
TGATCCAGGTACATAACCAGGGTCGAGCGACGGTTGCCGAGGGTAGTAAAGATAGAGATGGAGGTAGCCGTGCATGCGAT
GCACGGCTACGGTTTGCAGGCCTCGGTCGAAAAGGGCGGCCAAGGATGAGGATCGAGGGCACTCGAAATCGCTGGGTCTG
GTATCTAGAACACGTCGAAATTATCGGCATCGAGACTGCCCTGGGATATTACGTGGAGGCCTTGTCGCGTTTGCGTGCCG
CTCCTGCCCATTCCACGACGGAGGGGGGCCGTTCGCTTTTTGGGAGAGCCAGTTTTCTGGACTTCAGGAGGACGACGAGG
TGCGTCGATCGATCCTGCCCAGCGCCTATCGCGACGACGATTCAGCTGACGCGCAATTCCATGTCGACCATGACGCCGAG
GATGTCGCGGCGCGCTGGGAAGACGCTCAGTCCTTAA

Upstream 100 bases:

>100_bases
AGTGCGGTCGACATGGGTCACAGTCTAAGAGGGGGTGCGCTCTAGAGGATGTTTGCGTCGGTGAAGTTTGAGTGTCTCAC
CTGGGTGACAGAATGAGCAC

Downstream 100 bases:

>100_bases
GCGCTGATGTGGAGACGTTGCACCGAACCGGCTGTATTTCCATGAACCCTGAGATGACGCAACGTTGGCTTCGTACTGTC
AATGCGCTGCGTGGCATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSVATAEPMTHRLVGQESTWTTVVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQGRATVAEGSKDRDGGSRACD
ARLRFAGLGRKGRPRMRIEGTRNRWVWYLEHVEIIGIETALGYYVEALSRLRAAPAHSTTEGGRSLFGRASFLDFRRTTR
CVDRSCPAPIATTIQLTRNSMSTMTPRMSRRAGKTLSP

Sequences:

>Translated_198_residues
MSVATAEPMTHRLVGQESTWTTVVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQGRATVAEGSKDRDGGSRACD
ARLRFAGLGRKGRPRMRIEGTRNRWVWYLEHVEIIGIETALGYYVEALSRLRAAPAHSTTEGGRSLFGRASFLDFRRTTR
CVDRSCPAPIATTIQLTRNSMSTMTPRMSRRAGKTLSP
>Mature_197_residues
SVATAEPMTHRLVGQESTWTTVVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQGRATVAEGSKDRDGGSRACDA
RLRFAGLGRKGRPRMRIEGTRNRWVWYLEHVEIIGIETALGYYVEALSRLRAAPAHSTTEGGRSLFGRASFLDFRRTTRC
VDRSCPAPIATTIQLTRNSMSTMTPRMSRRAGKTLSP

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 22407; Mature: 22276

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVATAEPMTHRLVGQESTWTTVVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQ
CCCCCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
GRATVAEGSKDRDGGSRACDARLRFAGLGRKGRPRMRIEGTRNRWVWYLEHVEIIGIETA
CCEEECCCCCCCCCCCHHHHHHHHEECCCCCCCCCEEEECCCCCEEEEEEEEEEEEHHHH
LGYYVEALSRLRAAPAHSTTEGGRSLFGRASFLDFRRTTRCVDRSCPAPIATTIQLTRNS
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
MSTMTPRMSRRAGKTLSP
HHHHCHHHHHHCCCCCCC
>Mature Secondary Structure 
SVATAEPMTHRLVGQESTWTTVVWDDPVNLMDYVTMVFMRYFGYPRERATQLMIQVHNQ
CCCCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
GRATVAEGSKDRDGGSRACDARLRFAGLGRKGRPRMRIEGTRNRWVWYLEHVEIIGIETA
CCEEECCCCCCCCCCCHHHHHHHHEECCCCCCCCCEEEECCCCCEEEEEEEEEEEEHHHH
LGYYVEALSRLRAAPAHSTTEGGRSLFGRASFLDFRRTTRCVDRSCPAPIATTIQLTRNS
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
MSTMTPRMSRRAGKTLSP
HHHHCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA