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The map label for this gene is yurM [H]

Identifier: 50843122

GI number: 50843122

Start: 1813053

End: 1813859

Strand: Direct

Name: yurM [H]

Synonym: PPA1658

Alternate gene names: 50843122

Gene position: 1813053-1813859 (Clockwise)

Preceding gene: 50843121

Following gene: 50843124

Centisome position: 70.82

GC content: 58.49

Gene sequence:

>807_bases
ATGAGCACCGTAACTGCAACTGCGCCGGGGACCTTCGACCAGGAGACCCACCATAAGAAAAACACCTGGGCCAAGGTGCT
GCCGATCATCGGCATCGTCCTCATCGTCATCTACTGCCTGGCGCCGTTCTACTGGATGCTGGTGTCCTCGCTGCGTCCCG
ACTCGGAGATCTTCGACAACACCTGGTGGCCAACCCATCCGTCGATGGAGAATTACCAGGCAGTCTTCCAGCCGAGCAAC
AACTTTCTGCGCGGCCTGCTGAACTCCCTCATTGTCTCCGTCGCAGTGACGGTCATTGCTCTGCTCATCGCCACCTTCGC
GTCTTACGCGCTCGCGCGCCTAGATTTCCGCGGCAAGGGCGGATTCCTCATTCTCATCATCGCGACGTCGATGTTCCCAC
TGGTGGCCATCATCGTGCCGCTGCTGAAGAACTTCTCGGCATGGCATTGGATTAACACCTACCAGGCCATGATCATCCCG
GACCTGTCGTTCTCCCTGCCTCTAGCAGTGTGGAACCTTACGACCTTCTTCAAGCAGATGCCCGACGAGTTGGAGCAGGC
AGCCATGATTGACGGCTGCTCCCCGGCTCAAGCTTTCCGCAAGATCATCCTCCCGCTGGCGGCCCCCGGCATCTTCACCA
CCGCGATCATCGTCTTCATTGGTGCGTGGAACGAGTTCCTCGTCGCCGTCACCATGATCAACGATCCGAAGATGGAGCCC
GCCACAGTCTTGCTGTCGAAGTTGACCGGAGCCTCACAGTTCAACTCCCCGTTCGGCTCCCAAATGGCTGCTGGCGGTAT
CAAATGA

Upstream 100 bases:

>100_bases
TGAAAGCCACCACCTTCGTCTCTGGTGGACGTCCGGGTGGACGTCGTGCCCCGCAGAAAGCCAATGCTGTACAAGCCGCA
GCTAGCAAGGAGGCGGCGTC

Downstream 100 bases:

>100_bases
TGCGGTAACACAGTGTGGCTCCGGTCCACCATGGGCCGGAGCCACACCTGCTTTGCGCTATGACCGCTGTTTGCTAGGCG
GCACTGTTCTCACGCTCAGC

Product: binding-protein-dependent transport system inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSTVTATAPGTFDQETHHKKNTWAKVLPIIGIVLIVIYCLAPFYWMLVSSLRPDSEIFDNTWWPTHPSMENYQAVFQPSN
NFLRGLLNSLIVSVAVTVIALLIATFASYALARLDFRGKGGFLILIIATSMFPLVAIIVPLLKNFSAWHWINTYQAMIIP
DLSFSLPLAVWNLTTFFKQMPDELEQAAMIDGCSPAQAFRKIILPLAAPGIFTTAIIVFIGAWNEFLVAVTMINDPKMEP
ATVLLSKLTGASQFNSPFGSQMAAGGIK

Sequences:

>Translated_268_residues
MSTVTATAPGTFDQETHHKKNTWAKVLPIIGIVLIVIYCLAPFYWMLVSSLRPDSEIFDNTWWPTHPSMENYQAVFQPSN
NFLRGLLNSLIVSVAVTVIALLIATFASYALARLDFRGKGGFLILIIATSMFPLVAIIVPLLKNFSAWHWINTYQAMIIP
DLSFSLPLAVWNLTTFFKQMPDELEQAAMIDGCSPAQAFRKIILPLAAPGIFTTAIIVFIGAWNEFLVAVTMINDPKMEP
ATVLLSKLTGASQFNSPFGSQMAAGGIK
>Mature_267_residues
STVTATAPGTFDQETHHKKNTWAKVLPIIGIVLIVIYCLAPFYWMLVSSLRPDSEIFDNTWWPTHPSMENYQAVFQPSNN
FLRGLLNSLIVSVAVTVIALLIATFASYALARLDFRGKGGFLILIIATSMFPLVAIIVPLLKNFSAWHWINTYQAMIIPD
LSFSLPLAVWNLTTFFKQMPDELEQAAMIDGCSPAQAFRKIILPLAAPGIFTTAIIVFIGAWNEFLVAVTMINDPKMEPA
TVLLSKLTGASQFNSPFGSQMAAGGIK

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=214, Percent_Identity=33.6448598130841, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1789860, Length=186, Percent_Identity=25.8064516129032, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1790464, Length=147, Percent_Identity=34.0136054421769, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29545; Mature: 29414

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVTATAPGTFDQETHHKKNTWAKVLPIIGIVLIVIYCLAPFYWMLVSSLRPDSEIFDN
CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
TWWPTHPSMENYQAVFQPSNNFLRGLLNSLIVSVAVTVIALLIATFASYALARLDFRGKG
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GFLILIIATSMFPLVAIIVPLLKNFSAWHWINTYQAMIIPDLSFSLPLAVWNLTTFFKQM
CEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHH
PDELEQAAMIDGCSPAQAFRKIILPLAAPGIFTTAIIVFIGAWNEFLVAVTMINDPKMEP
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCH
ATVLLSKLTGASQFNSPFGSQMAAGGIK
HHHHHHHHHCCHHCCCCCCHHHHCCCCC
>Mature Secondary Structure 
STVTATAPGTFDQETHHKKNTWAKVLPIIGIVLIVIYCLAPFYWMLVSSLRPDSEIFDN
CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
TWWPTHPSMENYQAVFQPSNNFLRGLLNSLIVSVAVTVIALLIATFASYALARLDFRGKG
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GFLILIIATSMFPLVAIIVPLLKNFSAWHWINTYQAMIIPDLSFSLPLAVWNLTTFFKQM
CEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHH
PDELEQAAMIDGCSPAQAFRKIILPLAAPGIFTTAIIVFIGAWNEFLVAVTMINDPKMEP
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCH
ATVLLSKLTGASQFNSPFGSQMAAGGIK
HHHHHHHHHCCHHCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]