Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

Click here to switch to the map view.

The map label for this gene is 50843072

Identifier: 50843072

GI number: 50843072

Start: 1729145

End: 1730287

Strand: Reverse

Name: 50843072

Synonym: PPA1604

Alternate gene names: NA

Gene position: 1730287-1729145 (Counterclockwise)

Preceding gene: 50843073

Following gene: 50843071

Centisome position: 67.58

GC content: 64.65

Gene sequence:

>1143_bases
ATGCCTGACCAGCATGCGCTGCTCTCGGCGTCGGGCGCGCACCGGTGGCTGAACTGCCCACCCAGCGCGGTGCTGGAATC
CCGTGAGCCGGACTCGACGTCGGCGGCGGCCGAGCAGGGCACCGTCGCACACGCCCTGGCGGAGTGGAAGCTCCGGCGTG
CCCTGAACGACGCGCCGACTTTCAAGCCCGAGTCCGGCTGGATCGATACCGAGATGGAGGACCTGACCGACGACTACGTC
GCCTTCGTCCAGGAACACATCTCACTGGCACGGGAGGCCTGTGGTGATCCGCAGGTGCTGATCGAGCAGCGCCTCGACTT
CTCCCACGTCGTGCCGGGCGGTTTCGGTACCGGCGACTGCGTGATCATCGCCGAACCCAAGCTGCAGATCATCGATCTCA
AGTACGGGCAGGGCATCCTCGTCGAGGCCGCACACAACCCGCAGCTCATGTTGTACGCGCTCGGAGCCGTCCACGCTTTC
GGGGACTTGTATGACATCACCGATGTTGCGGTGACGATCTACCAGCCCCGGCGGGGCAACGTTGACACTTGGGAAACCAG
CGTCGCCGACCTCCTCGCATGGGCTGAGACCGAGGTGAAGCCGAAGGCCGAGTTGGCTGCGGCGGGCGGGGGCGAGTTCT
GTCCCGGCTCGTGGTGCCAGTTCTGCCGCATCGCACCGACGTGCCGAGCACGCGCCGAAGCCAACCTCGCGCTCGCCCAG
CACGAGTTCGCCCCACCGGCCGAGCTGTCCGGCAGCGAGATTGCGGACGTGCTGACAAGGATTCCACAGCTCAAAACGTG
GGCTGCGGATGTGGAGGCCTACGCGCTCTCGCAGGCGGTGAACCAGGGCAAGCACTGGGATGGTTTCAAGCTCGTCGCCG
GACGGTCTGTCCGCAAGTACACGGAGGAGAACGCCGTCGCCGAAGCGGCTGAAGCTGCCGGGTACGCCGACATCTACGAC
CGCAGACTCATCACGCTCACTGCGATGGAACGGCTCATGGACAAGAAGACCTTCAACGAGGTGCTCGGCGACCTCGTGGT
CAAGCCCGTGGGTAAGCCGACGCTCGTGTCTGACACCGACAAACGACCCGCGCTGGAAATCCACAGCGTACAAACCGAAT
TCACGAAAACAGAAAGCAGGTAA

Upstream 100 bases:

>100_bases
CAGGTGCGTGAGCTGATCGTCGCCACCGGCGCGGACAAGCTGTCGGCGGTTGACCCGACGAAGTACGGGTGGCTGCTGGC
CAAGGCGAAGGAGCTGTCCG

Downstream 100 bases:

>100_bases
CAACCTTGTCAACCAACAACCCCACCCGCGTCGTCACCGGCGAAGTCCGCCTCTCCTACGCTCACGTGTGGGAGCCGAAC
TCCATCCAGGGCGGCAAGCC

Product: phage-associated protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MPDQHALLSASGAHRWLNCPPSAVLESREPDSTSAAAEQGTVAHALAEWKLRRALNDAPTFKPESGWIDTEMEDLTDDYV
AFVQEHISLAREACGDPQVLIEQRLDFSHVVPGGFGTGDCVIIAEPKLQIIDLKYGQGILVEAAHNPQLMLYALGAVHAF
GDLYDITDVAVTIYQPRRGNVDTWETSVADLLAWAETEVKPKAELAAAGGGEFCPGSWCQFCRIAPTCRARAEANLALAQ
HEFAPPAELSGSEIADVLTRIPQLKTWAADVEAYALSQAVNQGKHWDGFKLVAGRSVRKYTEENAVAEAAEAAGYADIYD
RRLITLTAMERLMDKKTFNEVLGDLVVKPVGKPTLVSDTDKRPALEIHSVQTEFTKTESR

Sequences:

>Translated_380_residues
MPDQHALLSASGAHRWLNCPPSAVLESREPDSTSAAAEQGTVAHALAEWKLRRALNDAPTFKPESGWIDTEMEDLTDDYV
AFVQEHISLAREACGDPQVLIEQRLDFSHVVPGGFGTGDCVIIAEPKLQIIDLKYGQGILVEAAHNPQLMLYALGAVHAF
GDLYDITDVAVTIYQPRRGNVDTWETSVADLLAWAETEVKPKAELAAAGGGEFCPGSWCQFCRIAPTCRARAEANLALAQ
HEFAPPAELSGSEIADVLTRIPQLKTWAADVEAYALSQAVNQGKHWDGFKLVAGRSVRKYTEENAVAEAAEAAGYADIYD
RRLITLTAMERLMDKKTFNEVLGDLVVKPVGKPTLVSDTDKRPALEIHSVQTEFTKTESR
>Mature_379_residues
PDQHALLSASGAHRWLNCPPSAVLESREPDSTSAAAEQGTVAHALAEWKLRRALNDAPTFKPESGWIDTEMEDLTDDYVA
FVQEHISLAREACGDPQVLIEQRLDFSHVVPGGFGTGDCVIIAEPKLQIIDLKYGQGILVEAAHNPQLMLYALGAVHAFG
DLYDITDVAVTIYQPRRGNVDTWETSVADLLAWAETEVKPKAELAAAGGGEFCPGSWCQFCRIAPTCRARAEANLALAQH
EFAPPAELSGSEIADVLTRIPQLKTWAADVEAYALSQAVNQGKHWDGFKLVAGRSVRKYTEENAVAEAAEAAGYADIYDR
RLITLTAMERLMDKKTFNEVLGDLVVKPVGKPTLVSDTDKRPALEIHSVQTEFTKTESR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41497; Mature: 41366

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDQHALLSASGAHRWLNCPPSAVLESREPDSTSAAAEQGTVAHALAEWKLRRALNDAPT
CCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCC
FKPESGWIDTEMEDLTDDYVAFVQEHISLAREACGDPQVLIEQRLDFSHVVPGGFGTGDC
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHCCCCCCCCCCE
VIIAEPKLQIIDLKYGQGILVEAAHNPQLMLYALGAVHAFGDLYDITDVAVTIYQPRRGN
EEEECCCEEEEEEECCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHCCEEEEEECCCCCC
VDTWETSVADLLAWAETEVKPKAELAAAGGGEFCPGSWCQFCRIAPTCRARAEANLALAQ
CCHHHHHHHHHHHHHHCCCCCCHHHEECCCCCCCCHHHHHHHHCCCHHHHHHHCCHHHHH
HEFAPPAELSGSEIADVLTRIPQLKTWAADVEAYALSQAVNQGKHWDGFKLVAGRSVRKY
HCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHH
TEENAVAEAAEAAGYADIYDRRLITLTAMERLMDKKTFNEVLGDLVVKPVGKPTLVSDTD
HHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
KRPALEIHSVQTEFTKTESR
CCCCEEHHHHHHHHHHCCCC
>Mature Secondary Structure 
PDQHALLSASGAHRWLNCPPSAVLESREPDSTSAAAEQGTVAHALAEWKLRRALNDAPT
CCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCC
FKPESGWIDTEMEDLTDDYVAFVQEHISLAREACGDPQVLIEQRLDFSHVVPGGFGTGDC
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHCCCCCCCCCCE
VIIAEPKLQIIDLKYGQGILVEAAHNPQLMLYALGAVHAFGDLYDITDVAVTIYQPRRGN
EEEECCCEEEEEEECCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHCCEEEEEECCCCCC
VDTWETSVADLLAWAETEVKPKAELAAAGGGEFCPGSWCQFCRIAPTCRARAEANLALAQ
CCHHHHHHHHHHHHHHCCCCCCHHHEECCCCCCCCHHHHHHHHCCCHHHHHHHCCHHHHH
HEFAPPAELSGSEIADVLTRIPQLKTWAADVEAYALSQAVNQGKHWDGFKLVAGRSVRKY
HCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHH
TEENAVAEAAEAAGYADIYDRRLITLTAMERLMDKKTFNEVLGDLVVKPVGKPTLVSDTD
HHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
KRPALEIHSVQTEFTKTESR
CCCCEEHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA