Click here to switch to the map view.

The map label for this gene is pepE [C]

Identifier: 50843053

GI number: 50843053

Start: 1708330

End: 1708953

Strand: Direct

Name: pepE [C]

Synonym: PPA1579

Alternate gene names: 50843053

Gene position: 1708330-1708953 (Clockwise)

Preceding gene: 50843052

Following gene: 50843060

Centisome position: 66.72

GC content: 50.64

Gene sequence:

>624_bases
ATGAAATCTCTTACCCCTCATTTGCTTCTCTGCTCTTTTTTCACAAGCATTGCTCCTGCCTTAGGAGAAGGATTTCGCAA
CAAACGTGTGGCTTTCATTCCGACAGCAGCAGCCCACGAGGAGTACACAGCCTACGTGGATTCAGCACGCTCATCATGGA
AAGAACTTGGCAGCAATATCACCGATGTGGATATTGCCAGAATGCCTCTAAGAACAGCGACCGAGGCGCTTGAGCAAGCC
GAGATAATCTATCTTTCAGGAGGGAACTCCTTCTACCTCCTCGATTGCCTACGCTCAACAGAAATCGACCAGATTATTCG
AGGGCGTCTGGCCGAAGGGGCGATTCTAGTTGGTGAATCAGCTGGAGCTATAGTTTGTAGCCCAAATATCGCCTACATTC
AGCCAATGGATCGTGTCCCTGACAACTACAGCCAGGCTGACTACACCGGACTGAACTTAGTGGACTTCTTCCCGGTACCT
CACTACCTCGCCCCTCCATTTGTGAAGAGTTCCAAGGAAGTAGTCGCCCAGCACGCTAGCCTCCCACTCGAGCTCATGAA
CAACGCAGAAGCGGTAATAGTAGAGGGTCCCCAAAGGACAAAGATCTCATCAGAGCACCAGTAG

Upstream 100 bases:

>100_bases
AGAAGGAATGGCCCCACCAATCTGCTGGTCGGTAGAAGTACGGGGTTTGAGCCAGTCGAGTAGTTTCATAATCTGCTCCT
TGCAAGGTATTGTGAAGGAT

Downstream 100 bases:

>100_bases
TCCTCGTGAGTCGTACACCGACGTGCCCGTGTGGCTGCCACCGCCTCGGATAGCGCGGTCGAGGGCCATGATGGTGGCGA
CCACCTCGTCGATCTTCTCG

Product: S51 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKSLTPHLLLCSFFTSIAPALGEGFRNKRVAFIPTAAAHEEYTAYVDSARSSWKELGSNITDVDIARMPLRTATEALEQA
EIIYLSGGNSFYLLDCLRSTEIDQIIRGRLAEGAILVGESAGAIVCSPNIAYIQPMDRVPDNYSQADYTGLNLVDFFPVP
HYLAPPFVKSSKEVVAQHASLPLELMNNAEAVIVEGPQRTKISSEHQ

Sequences:

>Translated_207_residues
MKSLTPHLLLCSFFTSIAPALGEGFRNKRVAFIPTAAAHEEYTAYVDSARSSWKELGSNITDVDIARMPLRTATEALEQA
EIIYLSGGNSFYLLDCLRSTEIDQIIRGRLAEGAILVGESAGAIVCSPNIAYIQPMDRVPDNYSQADYTGLNLVDFFPVP
HYLAPPFVKSSKEVVAQHASLPLELMNNAEAVIVEGPQRTKISSEHQ
>Mature_207_residues
MKSLTPHLLLCSFFTSIAPALGEGFRNKRVAFIPTAAAHEEYTAYVDSARSSWKELGSNITDVDIARMPLRTATEALEQA
EIIYLSGGNSFYLLDCLRSTEIDQIIRGRLAEGAILVGESAGAIVCSPNIAYIQPMDRVPDNYSQADYTGLNLVDFFPVP
HYLAPPFVKSSKEVVAQHASLPLELMNNAEAVIVEGPQRTKISSEHQ

Specific function: Hydrolyzes Dipeptides Containing N-Terminal Aspartate Residues. May Play A Role In Allowing The Cell To Use Peptide Aspartate To Spare Carbon Otherwise Required For The Synthesis Of The Aspartate Family Of Amino Acids. [C]

COG id: COG3340

COG function: function code E; Peptidase E

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: 3.4.13.21 [C]

Molecular weight: Translated: 22673; Mature: 22673

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLTPHLLLCSFFTSIAPALGEGFRNKRVAFIPTAAAHEEYTAYVDSARSSWKELGSNI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC
TDVDIARMPLRTATEALEQAEIIYLSGGNSFYLLDCLRSTEIDQIIRGRLAEGAILVGES
CCCHHHHCCHHHHHHHHHCCEEEEEECCCEEEEEEEHHCCCHHHHHHHHHCCCEEEEECC
AGAIVCSPNIAYIQPMDRVPDNYSQADYTGLNLVDFFPVPHYLAPPFVKSSKEVVAQHAS
CCEEEECCCEEEECCHHHCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCHHHHHHHHHC
LPLELMNNAEAVIVEGPQRTKISSEHQ
CCHHHHCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKSLTPHLLLCSFFTSIAPALGEGFRNKRVAFIPTAAAHEEYTAYVDSARSSWKELGSNI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC
TDVDIARMPLRTATEALEQAEIIYLSGGNSFYLLDCLRSTEIDQIIRGRLAEGAILVGES
CCCHHHHCCHHHHHHHHHCCEEEEEECCCEEEEEEEHHCCCHHHHHHHHHCCCEEEEECC
AGAIVCSPNIAYIQPMDRVPDNYSQADYTGLNLVDFFPVPHYLAPPFVKSSKEVVAQHAS
CCEEEECCCEEEECCHHHCCCCCCCCCCCCCCEEEECCCCHHHCCCCCCCHHHHHHHHHC
LPLELMNNAEAVIVEGPQRTKISSEHQ
CCHHHHCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]