| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is pgl [H]
Identifier: 50843039
GI number: 50843039
Start: 1685055
End: 1685789
Strand: Direct
Name: pgl [H]
Synonym: PPA1565
Alternate gene names: 50843039
Gene position: 1685055-1685789 (Clockwise)
Preceding gene: 50843038
Following gene: 50843040
Centisome position: 65.82
GC content: 59.73
Gene sequence:
>735_bases ATGACAAGCCGACGCCTCATGCGGTACCAATCCGCCCAGGGGCTGGCCGAGGGGGTTGCCCACCGGCTAGTACAGACGAT CGTCAGGATCCAGGCCGCGCAGGAACGTATCGACCTGTGTCTCACCGGCGGGAGGATCGCCAATATCGTCTATGCCGCTA TGGAAGACGTTCCCGAATGCGCCAAGATTCGTCCAGACCAGTTACACGTCTGGTGGGGTGATGACCGATTCGTCCCCACC GGTCATCCTGACCGTAATTCCCTGCAAGCCCTGTCTCTATTGTCGTCAGCTATCCGTCTGGACCCTTCAAAGACCCACGT TATGCCCGCCGCCGACGGCAAGGCCGATCCCGACGAGGCCGCCTATTCCTACGCCCAGGAGCTCGGCGGTGTCGTCTTCG ACATTTGTTTGCTGGGGATGGGTACCGACGGCCACGTTGCTTCCCTGTTTCCAGGCCATCCCTCCTTCAATCCCACAACA GCCGCGCTGGCTGTTGGCGTCACGGATGCTCCCAAGCCTCCGCCGGATCGTCTCTCAGTTACGATGCCTGTCATCAACAG GTCGAAACGAGTCTGGTTCCTTGTCAGTGGGCCCGAAAAAGCTGAGGCTGTCGAGAAGGTTTTTGCTGGAGACGAGTCCT TGCCGGCTACCTGGGCCAACGGCACTATCGAGACGAGTTGGATGGTCGACCATGACGCCTCGATCGGTCTACCGAGGTAC AATTGCTCGCTGTGA
Upstream 100 bases:
>100_bases AGCTTCGTCGACTCGGCCCCGACAAGGTGTTCACCGCTGTCATGGCTGAAATTCACGATGGGGCGGGCCGAATCTCATTG ACGAATGGTAGGGATGAGTC
Downstream 100 bases:
>100_bases TGCCGCGGTAACTACGGCGTCACCACGGTCGTAGCCCCGCTGCGTGGTCCAGCGGCTCACAGACCACACGACCGGGCGAG TTGTCGCTGACAGCTAACAT
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTSRRLMRYQSAQGLAEGVAHRLVQTIVRIQAAQERIDLCLTGGRIANIVYAAMEDVPECAKIRPDQLHVWWGDDRFVPT GHPDRNSLQALSLLSSAIRLDPSKTHVMPAADGKADPDEAAYSYAQELGGVVFDICLLGMGTDGHVASLFPGHPSFNPTT AALAVGVTDAPKPPPDRLSVTMPVINRSKRVWFLVSGPEKAEAVEKVFAGDESLPATWANGTIETSWMVDHDASIGLPRY NCSL
Sequences:
>Translated_244_residues MTSRRLMRYQSAQGLAEGVAHRLVQTIVRIQAAQERIDLCLTGGRIANIVYAAMEDVPECAKIRPDQLHVWWGDDRFVPT GHPDRNSLQALSLLSSAIRLDPSKTHVMPAADGKADPDEAAYSYAQELGGVVFDICLLGMGTDGHVASLFPGHPSFNPTT AALAVGVTDAPKPPPDRLSVTMPVINRSKRVWFLVSGPEKAEAVEKVFAGDESLPATWANGTIETSWMVDHDASIGLPRY NCSL >Mature_243_residues TSRRLMRYQSAQGLAEGVAHRLVQTIVRIQAAQERIDLCLTGGRIANIVYAAMEDVPECAKIRPDQLHVWWGDDRFVPTG HPDRNSLQALSLLSSAIRLDPSKTHVMPAADGKADPDEAAYSYAQELGGVVFDICLLGMGTDGHVASLFPGHPSFNPTTA ALAVGVTDAPKPPPDRLSVTMPVINRSKRVWFLVSGPEKAEAVEKVFAGDESLPATWANGTIETSWMVDHDASIGLPRYN CSL
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=181, Percent_Identity=35.9116022099448, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI6912586, Length=241, Percent_Identity=31.1203319502075, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI115533058, Length=207, Percent_Identity=27.536231884058, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI115533060, Length=207, Percent_Identity=27.536231884058, Blast_Score=85, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6321957, Length=235, Percent_Identity=29.3617021276596, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6319918, Length=217, Percent_Identity=29.9539170506912, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6321687, Length=261, Percent_Identity=26.4367816091954, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6324362, Length=212, Percent_Identity=28.7735849056604, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI24641119, Length=215, Percent_Identity=28.8372093023256, Blast_Score=97, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 26429; Mature: 26298
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRRLMRYQSAQGLAEGVAHRLVQTIVRIQAAQERIDLCLTGGRIANIVYAAMEDVPEC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHH AKIRPDQLHVWWGDDRFVPTGHPDRNSLQALSLLSSAIRLDPSKTHVMPAADGKADPDEA HHCCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCHHHH AYSYAQELGGVVFDICLLGMGTDGHVASLFPGHPSFNPTTAALAVGVTDAPKPPPDRLSV HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHEEEEECCCCCCCCCCCEEE TMPVINRSKRVWFLVSGPEKAEAVEKVFAGDESLPATWANGTIETSWMVDHDASIGLPRY EEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEECCCEEEEEEEEECCCCCCCCCC NCSL CCCC >Mature Secondary Structure TSRRLMRYQSAQGLAEGVAHRLVQTIVRIQAAQERIDLCLTGGRIANIVYAAMEDVPEC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHH AKIRPDQLHVWWGDDRFVPTGHPDRNSLQALSLLSSAIRLDPSKTHVMPAADGKADPDEA HHCCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCHHHH AYSYAQELGGVVFDICLLGMGTDGHVASLFPGHPSFNPTTAALAVGVTDAPKPPPDRLSV HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHEEEEECCCCCCCCCCCEEE TMPVINRSKRVWFLVSGPEKAEAVEKVFAGDESLPATWANGTIETSWMVDHDASIGLPRY EEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEECCCEEEEEEEEECCCCCCCCCC NCSL CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]