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The map label for this gene is yurY [H]

Identifier: 50843022

GI number: 50843022

Start: 1664661

End: 1665428

Strand: Reverse

Name: yurY [H]

Synonym: PPA1546

Alternate gene names: 50843022

Gene position: 1665428-1664661 (Counterclockwise)

Preceding gene: 50843023

Following gene: 50843021

Centisome position: 65.05

GC content: 60.03

Gene sequence:

>768_bases
ATGGCAACCCTGCAGATCAATGACCTTCACGTCGACGTTGAGACCGAGGCCGGTCCCAAGCAGATCCTCAAGGGAGTCGA
CCTGACTATCAATTCCGGAGAAGTCCACGCCATCATGGGGCCGAACGGTTCGGGCAAGTCGACCCTGGCATATACCCTGG
CCGGGCATCCCAAGTACACGGTCACCGGTGGTTCCGTGACCCTCGACGGTGAGGACCTGCTGGCCATGACCGTTGACGAG
CGTGCTCGTACCGGCCTGTTTCTGTCGATGCAGTACCCAGTCGAGGTTCCTGGTGTCTCCGTCGCCAACTTTCTACGCAC
TGCCCGCACCGCTATTGAAGGCCGGGCCCCGAAGCTGCGCACCTGGGTCAAGGAGGTCAACGAGGCCCTGACCCGTCAGG
AGCTTGATCCGGACTTCGCTGAGCGTTCCGTCAATGAGGGATTCTCTGGTGGCGAGAAGAAACGCTCCGAGATGGCTCAG
TTGGAATTGCTGCACCCGAGGTTCGCCATCCTTGACGAGACCGACTCCGGTCTGGACATCGACGCTCTCAAAGTCGTCGC
CAACACGGTTAACCGTTACATGACTGATCCGGAGCACGGTCTGATGCTCATCACCCACTACACCCGCATCCTGCGTTACG
TAAAACCCACTCAGGTTCACGTCTACGTCGACGGTCGGGTTGCCGCTACTGGCGGTCCGGAGCTGGGCGAAGAGCTCGAG
GCTGAAGGCTACGAGAAGTACCTGTCCGCTGCCAAGGCCAACGCCTAA

Upstream 100 bases:

>100_bases
CCCCGCCACCGAACCACTTCCCGTTTACCCCGTGACTATCGACGGCGACAACGTTCTCGTCGACGTCGCCAATCCCATCA
TCAAGGAGTCCTGAACCACC

Downstream 100 bases:

>100_bases
TTATGAGCTACGACGTCGAGAAGATCAGGAAAGACTTTCCCATCCTGTCCACCAGGGTGGGGGATTACCCGTTGACGTAC
CTCGACTCGGCTAACACTTC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MATLQINDLHVDVETEAGPKQILKGVDLTINSGEVHAIMGPNGSGKSTLAYTLAGHPKYTVTGGSVTLDGEDLLAMTVDE
RARTGLFLSMQYPVEVPGVSVANFLRTARTAIEGRAPKLRTWVKEVNEALTRQELDPDFAERSVNEGFSGGEKKRSEMAQ
LELLHPRFAILDETDSGLDIDALKVVANTVNRYMTDPEHGLMLITHYTRILRYVKPTQVHVYVDGRVAATGGPELGEELE
AEGYEKYLSAAKANA

Sequences:

>Translated_255_residues
MATLQINDLHVDVETEAGPKQILKGVDLTINSGEVHAIMGPNGSGKSTLAYTLAGHPKYTVTGGSVTLDGEDLLAMTVDE
RARTGLFLSMQYPVEVPGVSVANFLRTARTAIEGRAPKLRTWVKEVNEALTRQELDPDFAERSVNEGFSGGEKKRSEMAQ
LELLHPRFAILDETDSGLDIDALKVVANTVNRYMTDPEHGLMLITHYTRILRYVKPTQVHVYVDGRVAATGGPELGEELE
AEGYEKYLSAAKANA
>Mature_254_residues
ATLQINDLHVDVETEAGPKQILKGVDLTINSGEVHAIMGPNGSGKSTLAYTLAGHPKYTVTGGSVTLDGEDLLAMTVDER
ARTGLFLSMQYPVEVPGVSVANFLRTARTAIEGRAPKLRTWVKEVNEALTRQELDPDFAERSVNEGFSGGEKKRSEMAQL
ELLHPRFAILDETDSGLDIDALKVVANTVNRYMTDPEHGLMLITHYTRILRYVKPTQVHVYVDGRVAATGGPELGEELEA
EGYEKYLSAAKANA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787972, Length=245, Percent_Identity=50.2040816326531, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1787370, Length=221, Percent_Identity=30.316742081448, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787500, Length=230, Percent_Identity=31.304347826087, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787029, Length=238, Percent_Identity=29.8319327731092, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786345, Length=224, Percent_Identity=30.8035714285714, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI87081709, Length=227, Percent_Identity=25.5506607929515, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1786319, Length=199, Percent_Identity=28.643216080402, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1789593, Length=194, Percent_Identity=26.8041237113402, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=240, Percent_Identity=28.75, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71996809, Length=217, Percent_Identity=29.4930875576037, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=217, Percent_Identity=29.0322580645161, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=217, Percent_Identity=29.0322580645161, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=203, Percent_Identity=30.5418719211823, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27811; Mature: 27680

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLQINDLHVDVETEAGPKQILKGVDLTINSGEVHAIMGPNGSGKSTLAYTLAGHPKYT
CCEEEEEEEEEEEECCCCHHHHHCCCCEEEECCEEEEEECCCCCCCCEEEEEEECCCEEE
VTGGSVTLDGEDLLAMTVDERARTGLFLSMQYPVEVPGVSVANFLRTARTAIEGRAPKLR
EECCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHH
TWVKEVNEALTRQELDPDFAERSVNEGFSGGEKKRSEMAQLELLHPRFAILDETDSGLDI
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCH
DALKVVANTVNRYMTDPEHGLMLITHYTRILRYVKPTQVHVYVDGRVAATGGPELGEELE
HHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHHHHH
AEGYEKYLSAAKANA
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATLQINDLHVDVETEAGPKQILKGVDLTINSGEVHAIMGPNGSGKSTLAYTLAGHPKYT
CEEEEEEEEEEEECCCCHHHHHCCCCEEEECCEEEEEECCCCCCCCEEEEEEECCCEEE
VTGGSVTLDGEDLLAMTVDERARTGLFLSMQYPVEVPGVSVANFLRTARTAIEGRAPKLR
EECCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHH
TWVKEVNEALTRQELDPDFAERSVNEGFSGGEKKRSEMAQLELLHPRFAILDETDSGLDI
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCH
DALKVVANTVNRYMTDPEHGLMLITHYTRILRYVKPTQVHVYVDGRVAATGGPELGEELE
HHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHHHHH
AEGYEKYLSAAKANA
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]