| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is cdsA [H]
Identifier: 50842995
GI number: 50842995
Start: 1639896
End: 1640759
Strand: Reverse
Name: cdsA [H]
Synonym: PPA1517
Alternate gene names: 50842995
Gene position: 1640759-1639896 (Counterclockwise)
Preceding gene: 50842996
Following gene: 50842994
Centisome position: 64.09
GC content: 59.61
Gene sequence:
>864_bases GTGGGCGAGCCTGAGAAGAAGACCACGGCCGCACGGACTCCACGTGCCGGCCGTGATCTTCCTGCTGCCATCACTACGGG CGTAGTGCTGTGCGGTGCCGTCATCGGCACCGTTGGATGGTGGCATTGGGGTTTCGTGTTGTTGATGACCTTGGCCCTTA TGGCCGGGGCCATTGAGCTTCATCGAGCGATGGTTCGTTTGGGAATGGACTCCGCGGTAGTTCCGATATGCGTCGGCACC GCAGTTATGGTCATTGGGGCATATGCGGCCTCGACCCTGAAGCTTCACATCCTGCCCAATACCTTCCTGGTGGTGACGTT AGGTGCGACGACAGTTGCCGCAATGGCGTGGCGACTGCCACGCGGGTCGCATGGCTTCGTCAAGGACGCTGCTGCCAGCC TTTTCACTATCGCCTACTTGCCATTGCTTGGCTGCTTCGTTCCCCTCATGATGGGCGATGACGGTGGTAGCCGCCGCATC GCTACCTGGATCCTCAGCGTCGTGGCTTCTGACACCGGCGGTTATGCCGTAGGGGTGCTATGTGGCAAACACAAGTTGGC CCCGCGTATTAGCCCGAAAAAGAGCTGGGAGGGTTTTGCCGGGTCCGTCATAACCGCAGCTTTCGTTGGATGGGCCTGTT TGGGAGGATTGCTGTCGGCGCCATGGTGGGCTGGGATTGTTCTTGGCGTTGTTCTAGCCTTGACCGGCACTGCGGGAGAC CTTGTCGAGTCGATGATTAAGCGTGACGCTGGTATCAAGGACATGTCGAACTTCTTGCCCGGTCATGGCGGGGTCATGGA CCGGCTCGACTCAGTGCTGTTTTCGGCGCCCTTCGCCTGGCTCGTCATGTCCCTTGTGCTGTGA
Upstream 100 bases:
>100_bases AGAAGGAGCTTGACCAGGTCACCCGCAAGTACGTTGAGCAGATTGACGAATTGCTGAAATCCAAGGAGAGCGAACTCCTC GAGATCTGATCAGATTCGAG
Downstream 100 bases:
>100_bases CTGTAGTCGCGGGGCCACTCCACTATGAGCTTGGCCAAGCTCCGATGATATACTATCTCCTAAGTAATAGCTATTAGGTA TAGATGGGGGCGAAGATGGA
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MGEPEKKTTAARTPRAGRDLPAAITTGVVLCGAVIGTVGWWHWGFVLLMTLALMAGAIELHRAMVRLGMDSAVVPICVGT AVMVIGAYAASTLKLHILPNTFLVVTLGATTVAAMAWRLPRGSHGFVKDAAASLFTIAYLPLLGCFVPLMMGDDGGSRRI ATWILSVVASDTGGYAVGVLCGKHKLAPRISPKKSWEGFAGSVITAAFVGWACLGGLLSAPWWAGIVLGVVLALTGTAGD LVESMIKRDAGIKDMSNFLPGHGGVMDRLDSVLFSAPFAWLVMSLVL
Sequences:
>Translated_287_residues MGEPEKKTTAARTPRAGRDLPAAITTGVVLCGAVIGTVGWWHWGFVLLMTLALMAGAIELHRAMVRLGMDSAVVPICVGT AVMVIGAYAASTLKLHILPNTFLVVTLGATTVAAMAWRLPRGSHGFVKDAAASLFTIAYLPLLGCFVPLMMGDDGGSRRI ATWILSVVASDTGGYAVGVLCGKHKLAPRISPKKSWEGFAGSVITAAFVGWACLGGLLSAPWWAGIVLGVVLALTGTAGD LVESMIKRDAGIKDMSNFLPGHGGVMDRLDSVLFSAPFAWLVMSLVL >Mature_286_residues GEPEKKTTAARTPRAGRDLPAAITTGVVLCGAVIGTVGWWHWGFVLLMTLALMAGAIELHRAMVRLGMDSAVVPICVGTA VMVIGAYAASTLKLHILPNTFLVVTLGATTVAAMAWRLPRGSHGFVKDAAASLFTIAYLPLLGCFVPLMMGDDGGSRRIA TWILSVVASDTGGYAVGVLCGKHKLAPRISPKKSWEGFAGSVITAAFVGWACLGGLLSAPWWAGIVLGVVLALTGTAGDL VESMIKRDAGIKDMSNFLPGHGGVMDRLDSVLFSAPFAWLVMSLVL
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=130, Percent_Identity=43.8461538461538, Blast_Score=104, Evalue=9e-24, Organism=Escherichia coli, GI1787677, Length=110, Percent_Identity=40.9090909090909, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 29975; Mature: 29844
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEPEKKTTAARTPRAGRDLPAAITTGVVLCGAVIGTVGWWHWGFVLLMTLALMAGAIEL CCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRAMVRLGMDSAVVPICVGTAVMVIGAYAASTLKLHILPNTFLVVTLGATTVAAMAWRLP HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEECHHHHHHHHHHCC RGSHGFVKDAAASLFTIAYLPLLGCFVPLMMGDDGGSRRIATWILSVVASDTGGYAVGVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE CGKHKLAPRISPKKSWEGFAGSVITAAFVGWACLGGLLSAPWWAGIVLGVVLALTGTAGD ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHH LVESMIKRDAGIKDMSNFLPGHGGVMDRLDSVLFSAPFAWLVMSLVL HHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHC >Mature Secondary Structure GEPEKKTTAARTPRAGRDLPAAITTGVVLCGAVIGTVGWWHWGFVLLMTLALMAGAIEL CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRAMVRLGMDSAVVPICVGTAVMVIGAYAASTLKLHILPNTFLVVTLGATTVAAMAWRLP HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEECHHHHHHHHHHCC RGSHGFVKDAAASLFTIAYLPLLGCFVPLMMGDDGGSRRIATWILSVVASDTGGYAVGVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE CGKHKLAPRISPKKSWEGFAGSVITAAFVGWACLGGLLSAPWWAGIVLGVVLALTGTAGD ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHH LVESMIKRDAGIKDMSNFLPGHGGVMDRLDSVLFSAPFAWLVMSLVL HHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]