| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842989
Identifier: 50842989
GI number: 50842989
Start: 1633766
End: 1635217
Strand: Direct
Name: 50842989
Synonym: PPA1511
Alternate gene names: NA
Gene position: 1633766-1635217 (Clockwise)
Preceding gene: 50842982
Following gene: 50842990
Centisome position: 63.81
GC content: 61.91
Gene sequence:
>1452_bases GTGTCACGGCGTTCCCACAATCCACAGTCCTGTTCTTCGGTGCCCACAGCACTCATCAACGGCCCTAGAGTGGAAACCAT GACTGACAGCGTTCTCGACGTCACTGCAGACGCGCTCGAGCAGGCCGGGGCTCACCCCCACCGGCTCGTCGTCCGCCAGC ACGGTCAGGTCGTTGGTCGACGACGGTGGGCTCCATGGAGCCCCGACGTCCCGAGTTTGGTCTACTCCTGCTCGAAAACA TTCACCTCAGCTGCCGTCGGCATCGCCGTGAATCGGGGAGCTTTCGGATACGACGACACTTTGGCCGATCTGTGGCCGCA GGCCTGCACCGCCAACACCGGGCCAGTAGCGAAATCCATGACGGTTCGCAATGCCCTGTCCATGTCGACCGGTCACTCCC CGGAGCAGCTCCTCGAACCAACATTGATGTCCCGCCGTCTGCCCGATCTCAACACCGCCCGGATCCTGCTGGCGACCGAG CCGGAAGGCCGTCCCGGTATCGACTTCGCCTACAACAATCTGGCCACCTGGATGCTTTCTCGGCTCGTTGCTCAACACAC CGGCGAGGACGTCGACACCATCATCACCAAGGAGGTTCTCGACCCGATCGGGGCGGGACCACACACCTGGGTCCGTGACG CCGACGGCATCCCGATGGGGTTCTCAGGACTGCATATTGACGCTGAAGACCTCTCTCTGTTCGGCCAGCTTCTCCTCGAC GATGGGGTGCATGAGGGCGCCCGTCTACTACCCGAGGAGTGGATCAGGCAGCACCGTGTCCGTCAAGTCAATTGCGACAG CGAGACCGATCCGGAATGGGGAATGGGGTATGGCTGGCAGACATGGATGTCAAGCCATGGGTACCGTCTGGACGGAGCCT TCGGCCAGTATGTCCTCATCGTCCCCGAGGTTGACGCCGTCATCACTATGACCAACGAGGCCAGTGAAGGCCCTGGTGAC AAGCAAGCCATTCTCCAAGCTGTCTGGGACCACCTCCTGCCTGCCTTAGCGGATGGATTCCAGCCACAGCCTGAGGAAAT CGTGCGCACTGTGCCCACCGTGACTGGAGAATTCGACTCGGCAAGGTCGGTGCAGGGAATCGCCCCTGATGGCTCATACA TCGTCGTCTCCCCGCACAAGGAGAGCAGAACCTGGGCGATGTCGTGGCGCTGTCCGGGCACCTTCAGCCATCCCACCGAC GAAACCCTCGACATCGCCGTGGGCTACGAGGAATGGCAGACCTCCCACTGCCGGGTCGGTGACGATGCCATCGATATCGC GACCAGCGGCGGGTGGCAGGGCGAAACCTTCGTGGCAAGACTGTGCGTCATCTCAACCCCTCACACCCTCACCTTGCGAA TGACCCCGGAGGCAACGACGACCGAGTGGGACAATGAACCACTCAACCCTGGTGGTTTGCTGGGCCTGGTGCACCCGGAG CTACGACGATGA
Upstream 100 bases:
>100_bases CGACCTCAAACTGGTCACGACGTGACGAAATGACCTCTAGAGTTTGGGTTCCGATCGATCCGGTGGAGCCGAGAATGATG ACCTTCTTCACCCTGCCAGT
Downstream 100 bases:
>100_bases GCACCACCCATATCGAGATCGAGACGGTCGACCAATTGCGCGCAGCTGCTCCCAATCTCGCCGGTCAGGTGGTCCAGGGA GTCGACCTCACCGGGTGCAG
Product: putative 6-aminohexanoate-dimer hydrolase
Products: NA
Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; Beta-Lactamase Family Protein; Beta-Lactamase Class C; Membrane Or Secreted Beta-Lactamase Family Protein; Exported 6-Aminohexanoate-Dimer Hydrolase Protein; Beta-Lactamase Class C-Like Protein; 6-Aminohexanoate-Dimer Hydrolase Protein; Hydrolase Transmembrane Protein; Hydrolase; Beta-Lactamase Class C Protein
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MSRRSHNPQSCSSVPTALINGPRVETMTDSVLDVTADALEQAGAHPHRLVVRQHGQVVGRRRWAPWSPDVPSLVYSCSKT FTSAAVGIAVNRGAFGYDDTLADLWPQACTANTGPVAKSMTVRNALSMSTGHSPEQLLEPTLMSRRLPDLNTARILLATE PEGRPGIDFAYNNLATWMLSRLVAQHTGEDVDTIITKEVLDPIGAGPHTWVRDADGIPMGFSGLHIDAEDLSLFGQLLLD DGVHEGARLLPEEWIRQHRVRQVNCDSETDPEWGMGYGWQTWMSSHGYRLDGAFGQYVLIVPEVDAVITMTNEASEGPGD KQAILQAVWDHLLPALADGFQPQPEEIVRTVPTVTGEFDSARSVQGIAPDGSYIVVSPHKESRTWAMSWRCPGTFSHPTD ETLDIAVGYEEWQTSHCRVGDDAIDIATSGGWQGETFVARLCVISTPHTLTLRMTPEATTTEWDNEPLNPGGLLGLVHPE LRR
Sequences:
>Translated_483_residues MSRRSHNPQSCSSVPTALINGPRVETMTDSVLDVTADALEQAGAHPHRLVVRQHGQVVGRRRWAPWSPDVPSLVYSCSKT FTSAAVGIAVNRGAFGYDDTLADLWPQACTANTGPVAKSMTVRNALSMSTGHSPEQLLEPTLMSRRLPDLNTARILLATE PEGRPGIDFAYNNLATWMLSRLVAQHTGEDVDTIITKEVLDPIGAGPHTWVRDADGIPMGFSGLHIDAEDLSLFGQLLLD DGVHEGARLLPEEWIRQHRVRQVNCDSETDPEWGMGYGWQTWMSSHGYRLDGAFGQYVLIVPEVDAVITMTNEASEGPGD KQAILQAVWDHLLPALADGFQPQPEEIVRTVPTVTGEFDSARSVQGIAPDGSYIVVSPHKESRTWAMSWRCPGTFSHPTD ETLDIAVGYEEWQTSHCRVGDDAIDIATSGGWQGETFVARLCVISTPHTLTLRMTPEATTTEWDNEPLNPGGLLGLVHPE LRR >Mature_482_residues SRRSHNPQSCSSVPTALINGPRVETMTDSVLDVTADALEQAGAHPHRLVVRQHGQVVGRRRWAPWSPDVPSLVYSCSKTF TSAAVGIAVNRGAFGYDDTLADLWPQACTANTGPVAKSMTVRNALSMSTGHSPEQLLEPTLMSRRLPDLNTARILLATEP EGRPGIDFAYNNLATWMLSRLVAQHTGEDVDTIITKEVLDPIGAGPHTWVRDADGIPMGFSGLHIDAEDLSLFGQLLLDD GVHEGARLLPEEWIRQHRVRQVNCDSETDPEWGMGYGWQTWMSSHGYRLDGAFGQYVLIVPEVDAVITMTNEASEGPGDK QAILQAVWDHLLPALADGFQPQPEEIVRTVPTVTGEFDSARSVQGIAPDGSYIVVSPHKESRTWAMSWRCPGTFSHPTDE TLDIAVGYEEWQTSHCRVGDDAIDIATSGGWQGETFVARLCVISTPHTLTLRMTPEATTTEWDNEPLNPGGLLGLVHPEL RR
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52904; Mature: 52773
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRSHNPQSCSSVPTALINGPRVETMTDSVLDVTADALEQAGAHPHRLVVRQHGQVVGR CCCCCCCCCHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHC RRWAPWSPDVPSLVYSCSKTFTSAAVGIAVNRGAFGYDDTLADLWPQACTANTGPVAKSM CCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHCHHHHCCCCCCCHHHH TVRNALSMSTGHSPEQLLEPTLMSRRLPDLNTARILLATEPEGRPGIDFAYNNLATWMLS HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH RLVAQHTGEDVDTIITKEVLDPIGAGPHTWVRDADGIPMGFSGLHIDAEDLSLFGQLLLD HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHH DGVHEGARLLPEEWIRQHRVRQVNCDSETDPEWGMGYGWQTWMSSHGYRLDGAFGQYVLI CCCCHHHHCCHHHHHHHHHCEEECCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCEEEE VPEVDAVITMTNEASEGPGDKQAILQAVWDHLLPALADGFQPQPEEIVRTVPTVTGEFDS EECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC ARSVQGIAPDGSYIVVSPHKESRTWAMSWRCPGTFSHPTDETLDIAVGYEEWQTSHCRVG CCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECHHHHCCCCCCCC DDAIDIATSGGWQGETFVARLCVISTPHTLTLRMTPEATTTEWDNEPLNPGGLLGLVHPE CCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCHH LRR HCC >Mature Secondary Structure SRRSHNPQSCSSVPTALINGPRVETMTDSVLDVTADALEQAGAHPHRLVVRQHGQVVGR CCCCCCCCHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHC RRWAPWSPDVPSLVYSCSKTFTSAAVGIAVNRGAFGYDDTLADLWPQACTANTGPVAKSM CCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHCHHHHCCCCCCCHHHH TVRNALSMSTGHSPEQLLEPTLMSRRLPDLNTARILLATEPEGRPGIDFAYNNLATWMLS HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH RLVAQHTGEDVDTIITKEVLDPIGAGPHTWVRDADGIPMGFSGLHIDAEDLSLFGQLLLD HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHH DGVHEGARLLPEEWIRQHRVRQVNCDSETDPEWGMGYGWQTWMSSHGYRLDGAFGQYVLI CCCCHHHHCCHHHHHHHHHCEEECCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCEEEE VPEVDAVITMTNEASEGPGDKQAILQAVWDHLLPALADGFQPQPEEIVRTVPTVTGEFDS EECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC ARSVQGIAPDGSYIVVSPHKESRTWAMSWRCPGTFSHPTDETLDIAVGYEEWQTSHCRVG CCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECHHHHCCCCCCCC DDAIDIATSGGWQGETFVARLCVISTPHTLTLRMTPEATTTEWDNEPLNPGGLLGLVHPE CCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCHH LRR HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA