| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842976
Identifier: 50842976
GI number: 50842976
Start: 1616712
End: 1618466
Strand: Reverse
Name: 50842976
Synonym: PPA1498
Alternate gene names: NA
Gene position: 1618466-1616712 (Counterclockwise)
Preceding gene: 50842977
Following gene: 50842975
Centisome position: 63.21
GC content: 59.94
Gene sequence:
>1755_bases ATGATGCCCGAGAACGAAGACGAGTTGACCAGAAGTGTCGACAAAGCGGCCAGAAATACGCTGGGACGGCGGACGTTTCT TGGTGGTGTGACCCTGGTCGCCGCTGCGGCGGTGACCGGCACCACCCCAGCGTTGGCCCATGCGTCGAAGCGTCTCCATT CCACGTCCGGCACCACCCTTGAACAGGTGGGTCTGCTAGATCCGGGCAGCGGCTACCGCAGGATCAAGGCACAGCGCGGT TACCCGCTCGTCGTCCGTGAGGAACTCGCTAGGGGCAAGAGCGGACGCGACGACCGCCGCGATGGCTTGGCGTCCTTCGT CCAGGTGACCGACCTGCACGTGACTGACGTGCAGTCACCGATGAGGGTCGAGTTCCTGCATCCGCTGGCTGGCCCGGCCT TCCGCCCGCAGGAGGCGTTGGGGCCACTCGCTACGGCCTCTTTGGTGCGCCGAGTCAATTCGCTTCAGGGCGGTCCGGCT ACTGGCCGGGCCTTTGACGCTCTCGTCAGCACTGGTGATAACACCGATAATCACGAACACGTGGAACTCGACTGGTATCT CACGTTGTTGGCCGGTGGCACGATCGTTCCCAATACCGGTGCCCGCGATCGCTGGGAAAGTGTGCAAACTTTCGGGAATC CGCTGTTCTACAATCCCGAATCGCATAGCAGTGACATATACAAGCGTGCCGGTTTTCCCCAGGTAGACGGCTATTTCCGT CGCGTTATGGCCCCCGTGACCTCCTCTGGCGTGAAGATTCCGTGGTATGCGGTATTCGGGAACCACGACGATTCGATCCA GGGCACCCTGCCTTCTGACTGGGGACTGCTGAAGACGATGTACACCAGTGATCGCAAAATCACCGGTTTCGCCAGTGACA ACGACACCAAGGCCTACCTCCAGGCGGCTCAGGGAAACGGACCAGTCGCCCTGTCCAACGATACTGTGTCGCTGACTCGA CAGATTACCGCGGACGAACGTCGCGTGCCCTTCACCCCCTTCGAATTCATCAAGGCTCATTTGCGTGACGGCGTCAATGG TTCGGGCCCGCACGGTCATGGTTTCAGCGAGGATGACCTCAATGCCGTGCGCGGTTACTACACCTTCTCGATTGCCAACG GCGTGACCGGAATCAGCCTGGACTCGACGAACCGGGCCGGGTACACCGATGGTTCTATCGACGACCGTCAGTGGAAGTGG CTTAAATCCGTGCTGCGCGCTGGCAGTAGCGTGTACTACGACGATCTCGGCGTGCGTCATCATCACGATGTGAGCGACAC AATGTTCGTCCTCTTCAGTCACCACGACTCGATGACGATGAACAACCCCGTCCTCCCCGGCGACGGTACGGGCATCCGTC ATCTCGGCCCGGAATTGGTCTCCCTGCTATCGCATTACCCGAACGTGCTTGCCTGGGTCAATGGACACGTGCATGCGAAC AACATCACCGCACACCACCATGCTCTCGATGCCCGTCGCAGCTGGTGGGAGATCAACACGGCTTCCCACGTCGACTTTCC CCAGATGGCCCGCATCATCGAGCTCGCCGACAATCACGACGGCACCGTGAGCATCTTTACCACGCTCATCGAGTCGAATG CTCCGTACCAGGCCGATTACGACACCACCGACCCAGATGGTCTGGCCAGTTTGTACCGAGAGTTTGGTGCGAACGACATC CATACGAGAATGGGTAGGCTCGGTACATCGGTCGATCACAACACGGAGTTGCTACTGGCGCATCCTTGGGCCTGA
Upstream 100 bases:
>100_bases GCCAACTGTTCTCGAAAACTGGCGCGGAAGTGACCCAATAAACCCTGACAATGGTGCTCGTAAGTCAGGCTGAACGGCCC CTCGACCTTGCGAAAGGTGA
Downstream 100 bases:
>100_bases GGCATTTCCGGACCGAGAACACATATTGGGTCCCGCCCCGTCGGGGTGGGACCCTTACTGCTGGTGTCACAGGGAAGGTT GACACGTGACGTCTTGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence; Twin-Arginine Translocation Pathway Signal; Calcineurin-Like Phosphoesterase; Hydrolase; Geranylgeranylglyceryl Phosphate Synthase Family Protein
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MMPENEDELTRSVDKAARNTLGRRTFLGGVTLVAAAAVTGTTPALAHASKRLHSTSGTTLEQVGLLDPGSGYRRIKAQRG YPLVVREELARGKSGRDDRRDGLASFVQVTDLHVTDVQSPMRVEFLHPLAGPAFRPQEALGPLATASLVRRVNSLQGGPA TGRAFDALVSTGDNTDNHEHVELDWYLTLLAGGTIVPNTGARDRWESVQTFGNPLFYNPESHSSDIYKRAGFPQVDGYFR RVMAPVTSSGVKIPWYAVFGNHDDSIQGTLPSDWGLLKTMYTSDRKITGFASDNDTKAYLQAAQGNGPVALSNDTVSLTR QITADERRVPFTPFEFIKAHLRDGVNGSGPHGHGFSEDDLNAVRGYYTFSIANGVTGISLDSTNRAGYTDGSIDDRQWKW LKSVLRAGSSVYYDDLGVRHHHDVSDTMFVLFSHHDSMTMNNPVLPGDGTGIRHLGPELVSLLSHYPNVLAWVNGHVHAN NITAHHHALDARRSWWEINTASHVDFPQMARIIELADNHDGTVSIFTTLIESNAPYQADYDTTDPDGLASLYREFGANDI HTRMGRLGTSVDHNTELLLAHPWA
Sequences:
>Translated_584_residues MMPENEDELTRSVDKAARNTLGRRTFLGGVTLVAAAAVTGTTPALAHASKRLHSTSGTTLEQVGLLDPGSGYRRIKAQRG YPLVVREELARGKSGRDDRRDGLASFVQVTDLHVTDVQSPMRVEFLHPLAGPAFRPQEALGPLATASLVRRVNSLQGGPA TGRAFDALVSTGDNTDNHEHVELDWYLTLLAGGTIVPNTGARDRWESVQTFGNPLFYNPESHSSDIYKRAGFPQVDGYFR RVMAPVTSSGVKIPWYAVFGNHDDSIQGTLPSDWGLLKTMYTSDRKITGFASDNDTKAYLQAAQGNGPVALSNDTVSLTR QITADERRVPFTPFEFIKAHLRDGVNGSGPHGHGFSEDDLNAVRGYYTFSIANGVTGISLDSTNRAGYTDGSIDDRQWKW LKSVLRAGSSVYYDDLGVRHHHDVSDTMFVLFSHHDSMTMNNPVLPGDGTGIRHLGPELVSLLSHYPNVLAWVNGHVHAN NITAHHHALDARRSWWEINTASHVDFPQMARIIELADNHDGTVSIFTTLIESNAPYQADYDTTDPDGLASLYREFGANDI HTRMGRLGTSVDHNTELLLAHPWA >Mature_584_residues MMPENEDELTRSVDKAARNTLGRRTFLGGVTLVAAAAVTGTTPALAHASKRLHSTSGTTLEQVGLLDPGSGYRRIKAQRG YPLVVREELARGKSGRDDRRDGLASFVQVTDLHVTDVQSPMRVEFLHPLAGPAFRPQEALGPLATASLVRRVNSLQGGPA TGRAFDALVSTGDNTDNHEHVELDWYLTLLAGGTIVPNTGARDRWESVQTFGNPLFYNPESHSSDIYKRAGFPQVDGYFR RVMAPVTSSGVKIPWYAVFGNHDDSIQGTLPSDWGLLKTMYTSDRKITGFASDNDTKAYLQAAQGNGPVALSNDTVSLTR QITADERRVPFTPFEFIKAHLRDGVNGSGPHGHGFSEDDLNAVRGYYTFSIANGVTGISLDSTNRAGYTDGSIDDRQWKW LKSVLRAGSSVYYDDLGVRHHHDVSDTMFVLFSHHDSMTMNNPVLPGDGTGIRHLGPELVSLLSHYPNVLAWVNGHVHAN NITAHHHALDARRSWWEINTASHVDFPQMARIIELADNHDGTVSIFTTLIESNAPYQADYDTTDPDGLASLYREFGANDI HTRMGRLGTSVDHNTELLLAHPWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64056; Mature: 64056
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPENEDELTRSVDKAARNTLGRRTFLGGVTLVAAAAVTGTTPALAHASKRLHSTSGTTL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH EQVGLLDPGSGYRRIKAQRGYPLVVREELARGKSGRDDRRDGLASFVQVTDLHVTDVQSP HHCCCCCCCCCCHHEECCCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHHHCEEEECCCCC MRVEFLHPLAGPAFRPQEALGPLATASLVRRVNSLQGGPATGRAFDALVSTGDNTDNHEH CEEEEHHHCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCE VELDWYLTLLAGGTIVPNTGARDRWESVQTFGNPLFYNPESHSSDIYKRAGFPQVDGYFR EEEEEEEEEEECCEECCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHCCCCCHHHHHH RVMAPVTSSGVKIPWYAVFGNHDDSIQGTLPSDWGLLKTMYTSDRKITGFASDNDTKAYL HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHH QAAQGNGPVALSNDTVSLTRQITADERRVPFTPFEFIKAHLRDGVNGSGPHGHGFSEDDL EECCCCCCEEECCCCEEEHEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHH NAVRGYYTFSIANGVTGISLDSTNRAGYTDGSIDDRQWKWLKSVLRAGSSVYYDDLGVRH HHHHCEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCC HHDVSDTMFVLFSHHDSMTMNNPVLPGDGTGIRHLGPELVSLLSHYPNVLAWVNGHVHAN CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCEEEEECCEEEEC NITAHHHALDARRSWWEINTASHVDFPQMARIIELADNHDGTVSIFTTLIESNAPYQADY CEEHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC DTTDPDGLASLYREFGANDIHTRMGRLGTSVDHNTELLLAHPWA CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCC >Mature Secondary Structure MMPENEDELTRSVDKAARNTLGRRTFLGGVTLVAAAAVTGTTPALAHASKRLHSTSGTTL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH EQVGLLDPGSGYRRIKAQRGYPLVVREELARGKSGRDDRRDGLASFVQVTDLHVTDVQSP HHCCCCCCCCCCHHEECCCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHHHCEEEECCCCC MRVEFLHPLAGPAFRPQEALGPLATASLVRRVNSLQGGPATGRAFDALVSTGDNTDNHEH CEEEEHHHCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCE VELDWYLTLLAGGTIVPNTGARDRWESVQTFGNPLFYNPESHSSDIYKRAGFPQVDGYFR EEEEEEEEEEECCEECCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHCCCCCHHHHHH RVMAPVTSSGVKIPWYAVFGNHDDSIQGTLPSDWGLLKTMYTSDRKITGFASDNDTKAYL HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHH QAAQGNGPVALSNDTVSLTRQITADERRVPFTPFEFIKAHLRDGVNGSGPHGHGFSEDDL EECCCCCCEEECCCCEEEHEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHH NAVRGYYTFSIANGVTGISLDSTNRAGYTDGSIDDRQWKWLKSVLRAGSSVYYDDLGVRH HHHHCEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCC HHDVSDTMFVLFSHHDSMTMNNPVLPGDGTGIRHLGPELVSLLSHYPNVLAWVNGHVHAN CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCEEEEECCEEEEC NITAHHHALDARRSWWEINTASHVDFPQMARIIELADNHDGTVSIFTTLIESNAPYQADY CEEHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC DTTDPDGLASLYREFGANDIHTRMGRLGTSVDHNTELLLAHPWA CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA