Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

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The map label for this gene is 50842939

Identifier: 50842939

GI number: 50842939

Start: 1577984

End: 1579183

Strand: Direct

Name: 50842939

Synonym: PPA1460

Alternate gene names: NA

Gene position: 1577984-1579183 (Clockwise)

Preceding gene: 50842938

Following gene: 50842940

Centisome position: 61.63

GC content: 60.67

Gene sequence:

>1200_bases
ATGAAGATTGGCGTTAATTACACCCCCTCCCAAGGGTGGTTTCACAGCTGGCTTGACCTCGATCTCGACGCCACCCGCCG
TGACTTTGAAGGCATTGCCCAGCTCGGCCTCGATCATGTGCGCCTGTTTCCGCTCTGGCCGTTGTTACAGCCTAACCGCG
GTCTGGTCCGCCCACGGGCCCTCGATGACGTCGTCTCCGTCGTGCGCGCGGCCGGCGAATTTGACCTTGAGGTTACCGTC
GATGCCCTCAATGGACATCTGTCGAGTTACGACTTCCTGCCCTCCTGGGTGATCACATGGCACGCGTCAAATCTCTTCAC
CGATCCGCTCGTCGAGGCTGGCCAGACCGACCTCATCAGCCAACTGGCAACACGCCTGCGGGAGGAGCCGAACGCCACCG
GCATGACGGTGGGCAACGAGTTCCCGCAGTACACAGCTCTGGCCCCGGACCATCATCATCCGACGCGCAGTGAGTGCACC
GTCGATGAGGCCCAGACGTGGTTGGAAACGATGCTCGGGACCATGCGGGACCAGTGGCCGGACGGACGGTTCTGGTTCGG
GTTCGACGACGACCTCTGGTTCGTCGACGACCATCCGTTCACCCCACGTCACGCCGTAACTCAGGGATCCGCTACGACCG
TCCATTCTTGGGTGTTCGCCCAAGTAGGCCCCCGTTTTGGAGAGGGACATCCCGCCCTGACATGGTTCCCCCGCTATCTG
CTCGAACTGGCCCGAGCCTGGAGCCCTAACCCCCAACGCCCACTCTGGCTGCAAGAAATAGGAGCACCTCGAACCCACGT
ACCCAACGCCATCGCCGCCACCTTCATGACAACAACGATGACATCACTAACCTCAACACCAGGCCTAGAAGCCATCACCT
GGTGGTGCTCCCACGACGTCTCCCATGACCTACTCGATTTTCCAAAACTGGAATACTCACTCGGCCTATTCACCAACGAC
GGCAAACCAAAACCAGAAGCCCTGGCCCTATCAGACATCCTGCCCGACCTGCACAACGCCCAACCCCAGAACCAACTCGA
CGAACCACTCGAGTTCAGCGCCAACTGGGATACCGGTCAAGGCCGCTCAACGTGCTCCCCGATAGGCGATCTCTTCGCTC
AGTGGGTTGACCAGGCAGAACGAACCGGGAAGGCTCCGCGGCTTCGCCGAGTGCGAACGCAACATTGCCCTGTGCCCTGA

Upstream 100 bases:

>100_bases
AGGTAGCGCCGTCGGTCGTCACCGCTGACCTTGCCGACGGCACCATCGGTTTGTCCATGCGCCCCTTCCAAGTCGCGACC
CTCAGGTTGGGACGCAACCG

Downstream 100 bases:

>100_bases
GCGATGGGCGCTTATTAGCATCGTTGTATGCGTATTTTAGTTGTAGCAGCCCGTGGAACAAATGGAAAAGGTAACCACCT
TGTTTCGCAATCATGACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MKIGVNYTPSQGWFHSWLDLDLDATRRDFEGIAQLGLDHVRLFPLWPLLQPNRGLVRPRALDDVVSVVRAAGEFDLEVTV
DALNGHLSSYDFLPSWVITWHASNLFTDPLVEAGQTDLISQLATRLREEPNATGMTVGNEFPQYTALAPDHHHPTRSECT
VDEAQTWLETMLGTMRDQWPDGRFWFGFDDDLWFVDDHPFTPRHAVTQGSATTVHSWVFAQVGPRFGEGHPALTWFPRYL
LELARAWSPNPQRPLWLQEIGAPRTHVPNAIAATFMTTTMTSLTSTPGLEAITWWCSHDVSHDLLDFPKLEYSLGLFTND
GKPKPEALALSDILPDLHNAQPQNQLDEPLEFSANWDTGQGRSTCSPIGDLFAQWVDQAERTGKAPRLRRVRTQHCPVP

Sequences:

>Translated_399_residues
MKIGVNYTPSQGWFHSWLDLDLDATRRDFEGIAQLGLDHVRLFPLWPLLQPNRGLVRPRALDDVVSVVRAAGEFDLEVTV
DALNGHLSSYDFLPSWVITWHASNLFTDPLVEAGQTDLISQLATRLREEPNATGMTVGNEFPQYTALAPDHHHPTRSECT
VDEAQTWLETMLGTMRDQWPDGRFWFGFDDDLWFVDDHPFTPRHAVTQGSATTVHSWVFAQVGPRFGEGHPALTWFPRYL
LELARAWSPNPQRPLWLQEIGAPRTHVPNAIAATFMTTTMTSLTSTPGLEAITWWCSHDVSHDLLDFPKLEYSLGLFTND
GKPKPEALALSDILPDLHNAQPQNQLDEPLEFSANWDTGQGRSTCSPIGDLFAQWVDQAERTGKAPRLRRVRTQHCPVP
>Mature_399_residues
MKIGVNYTPSQGWFHSWLDLDLDATRRDFEGIAQLGLDHVRLFPLWPLLQPNRGLVRPRALDDVVSVVRAAGEFDLEVTV
DALNGHLSSYDFLPSWVITWHASNLFTDPLVEAGQTDLISQLATRLREEPNATGMTVGNEFPQYTALAPDHHHPTRSECT
VDEAQTWLETMLGTMRDQWPDGRFWFGFDDDLWFVDDHPFTPRHAVTQGSATTVHSWVFAQVGPRFGEGHPALTWFPRYL
LELARAWSPNPQRPLWLQEIGAPRTHVPNAIAATFMTTTMTSLTSTPGLEAITWWCSHDVSHDLLDFPKLEYSLGLFTND
GKPKPEALALSDILPDLHNAQPQNQLDEPLEFSANWDTGQGRSTCSPIGDLFAQWVDQAERTGKAPRLRRVRTQHCPVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45043; Mature: 45043

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGVNYTPSQGWFHSWLDLDLDATRRDFEGIAQLGLDHVRLFPLWPLLQPNRGLVRPRA
CEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCCCCCHH
LDDVVSVVRAAGEFDLEVTVDALNGHLSSYDFLPSWVITWHASNLFTDPLVEAGQTDLIS
HHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCCCCEEEEEECCHHCCCHHHHCCCHHHHH
QLATRLREEPNATGMTVGNEFPQYTALAPDHHHPTRSECTVDEAQTWLETMLGTMRDQWP
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
DGRFWFGFDDDLWFVDDHPFTPRHAVTQGSATTVHSWVFAQVGPRFGEGHPALTWFPRYL
CCCEEECCCCCEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LELARAWSPNPQRPLWLQEIGAPRTHVPNAIAATFMTTTMTSLTSTPGLEAITWWCSHDV
HHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCC
SHDLLDFPKLEYSLGLFTNDGKPKPEALALSDILPDLHNAQPQNQLDEPLEFSANWDTGQ
CHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHCCHHHCCCCCHHCCCCCCCCCCCCCCC
GRSTCSPIGDLFAQWVDQAERTGKAPRLRRVRTQHCPVP
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKIGVNYTPSQGWFHSWLDLDLDATRRDFEGIAQLGLDHVRLFPLWPLLQPNRGLVRPRA
CEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCCCCCHH
LDDVVSVVRAAGEFDLEVTVDALNGHLSSYDFLPSWVITWHASNLFTDPLVEAGQTDLIS
HHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCCCCEEEEEECCHHCCCHHHHCCCHHHHH
QLATRLREEPNATGMTVGNEFPQYTALAPDHHHPTRSECTVDEAQTWLETMLGTMRDQWP
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
DGRFWFGFDDDLWFVDDHPFTPRHAVTQGSATTVHSWVFAQVGPRFGEGHPALTWFPRYL
CCCEEECCCCCEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LELARAWSPNPQRPLWLQEIGAPRTHVPNAIAATFMTTTMTSLTSTPGLEAITWWCSHDV
HHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCC
SHDLLDFPKLEYSLGLFTNDGKPKPEALALSDILPDLHNAQPQNQLDEPLEFSANWDTGQ
CHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHCCHHHCCCCCHHCCCCCCCCCCCCCCC
GRSTCSPIGDLFAQWVDQAERTGKAPRLRRVRTQHCPVP
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA