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The map label for this gene is ycfF [C]

Identifier: 50842857

GI number: 50842857

Start: 1495957

End: 1496367

Strand: Reverse

Name: ycfF [C]

Synonym: PPA1375

Alternate gene names: 50842857

Gene position: 1496367-1495957 (Counterclockwise)

Preceding gene: 50842858

Following gene: 50842856

Centisome position: 58.45

GC content: 58.88

Gene sequence:

>411_bases
ATGGACTGCCTTTTCTGCTCAATCGCTGCGGGAGACATCCCAGCGACGATCATTGACTCGGACGACGCCTCAGTCGCATT
CCTCGACATCGAGCCTTTCCAGGATGGCCACACTCTCGTCATCCCGCGTAGGCACGTTACAAGCGTTCTCGACGATGATG
GTGAGCTCGGACGTATCAGCCCGATGGTCACGAAGGTGGCTCGTCGCCTCGTGGACTCTCTGGGGGCTTCTGGAGTCAAT
GTCGTCTCAAACGCCGGTGAGGTTGCCGGTCAGAGTGTCCATCATCTGCACGTGCATGTCATTCCCCGGTACGACCGTGA
GCCGGGCATCAACGCCATTCGGTCGGCCATGCCTCGTCGCCCTATTGAGGAGGTTGCGGCCATGGTGACTGGGGAATCGA
ATCGCAAATAG

Upstream 100 bases:

>100_bases
TGACGATCGCGCAGATCAAGGACGGCCTGCGTCATGCCGGCTTTGAGGTCCGCTGAGCGAACACGTACTGCACGCCTAGC
CGATGTGGTAGTCATAACTT

Downstream 100 bases:

>100_bases
CTCATAATGTGAGACGTTTGTCCGAAACTGTTGACGGTTAGTCGTGCACACAAGGATCAGTGGCATGAACGACCAGCTTC
TTGTTATTGGCTAGTGTCCT

Product: putative cell-cycle regulation histidine triad protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MDCLFCSIAAGDIPATIIDSDDASVAFLDIEPFQDGHTLVIPRRHVTSVLDDDGELGRISPMVTKVARRLVDSLGASGVN
VVSNAGEVAGQSVHHLHVHVIPRYDREPGINAIRSAMPRRPIEEVAAMVTGESNRK

Sequences:

>Translated_136_residues
MDCLFCSIAAGDIPATIIDSDDASVAFLDIEPFQDGHTLVIPRRHVTSVLDDDGELGRISPMVTKVARRLVDSLGASGVN
VVSNAGEVAGQSVHHLHVHVIPRYDREPGINAIRSAMPRRPIEEVAAMVTGESNRK
>Mature_136_residues
MDCLFCSIAAGDIPATIIDSDDASVAFLDIEPFQDGHTLVIPRRHVTSVLDDDGELGRISPMVTKVARRLVDSLGASGVN
VVSNAGEVAGQSVHHLHVHVIPRYDREPGINAIRSAMPRRPIEEVAAMVTGESNRK

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=105, Percent_Identity=41.9047619047619, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17506713, Length=104, Percent_Identity=41.3461538461538, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320078, Length=109, Percent_Identity=36.697247706422, Blast_Score=80, Evalue=7e-17,
Organism=Drosophila melanogaster, GI28574010, Length=102, Percent_Identity=38.2352941176471, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24581222, Length=102, Percent_Identity=38.2352941176471, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 14620; Mature: 14620

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCLFCSIAAGDIPATIIDSDDASVAFLDIEPFQDGHTLVIPRRHVTSVLDDDGELGRIS
CCEEEEEEECCCCCEEEECCCCCEEEEEEECCCCCCCEEEECHHHHHHHHCCCCCCCCCC
PMVTKVARRLVDSLGASGVNVVSNAGEVAGQSVHHLHVHVIPRYDREPGINAIRSAMPRR
HHHHHHHHHHHHHHCCCCCHHHCCCCHHCCCCEEEEEEEEEECCCCCCCHHHHHHHCCCC
PIEEVAAMVTGESNRK
CHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDCLFCSIAAGDIPATIIDSDDASVAFLDIEPFQDGHTLVIPRRHVTSVLDDDGELGRIS
CCEEEEEEECCCCCEEEECCCCCEEEEEEECCCCCCCEEEECHHHHHHHHCCCCCCCCCC
PMVTKVARRLVDSLGASGVNVVSNAGEVAGQSVHHLHVHVIPRYDREPGINAIRSAMPRR
HHHHHHHHHHHHHHCCCCCHHHCCCCHHCCCCEEEEEEEEEECCCCCCCHHHHHHHCCCC
PIEEVAAMVTGESNRK
CHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7569993 [H]