| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is ilvC
Identifier: 50842854
GI number: 50842854
Start: 1493821
End: 1494849
Strand: Reverse
Name: ilvC
Synonym: PPA1372
Alternate gene names: 50842854
Gene position: 1494849-1493821 (Counterclockwise)
Preceding gene: 50842855
Following gene: 50842852
Centisome position: 58.39
GC content: 58.5
Gene sequence:
>1029_bases ATGGCAAAGATCTACTACGACGATGACGCCGATCTGTCCATCATCCAAAACCGTCAGGTTGCCGTCATCGGTTACGGTTC CCAAGGTCATGCTCACGCTCTCAACCTGCGCGACTCCGGTGTCGATGTGCGTGTCGGTCTGCGTGACGGCTCCTCGTCTA TCGCCAAGGCTGAGGCTCAGGGGCTGCGGGTGCTGTCCATCGAGGATGCCTGCGAAGAGGCCGACTTAATTATGGTGCTC GTTCCCGACCAAAACCAGCGCCAGCTCTATGCTGAGCACATTGCCCCGCACCTCAAGGACGGTGACGCTCTCTTCTTCGC TCACGGCTTCAACGTCCACTTCGGCTACATCAAAGCTCCCCAGGGCGTCGACGTCTGTATGGTTGCCCCGAAGGGTCCCG GTCACATCGTGCGTCGGGAGTACTCTGATGGTCGCGGAGTCCCGGTGCTGGTGTGCGTCGAGCAGGATGCCTCTGGCATC GCCTGGGACCTCACGAGGTCTTACGCCAAGGCCCTCGGCGGTTTGCGCGCCGGCGGCATTGAAACGAGCTTCCGTGAGGA GACCGAGACCGATCTTTTCGGTGAGCAAGCGGTGCTGTGCGGTGGCCTGTCCCACCTCATCCAGGCCGGTTTTGAGACTC TCGTTACCGCCGGTTACCAGCCGGAGATGGCCTATTTTGAGGTTTGTCACGAGATGAAGATGATCGTCGACCTCATCATC GAAGGCGGTATCTCCAAGCTGCGTTGGTCAATTTCCGATACTGCTGAGTATGGCGACTACGTGTCTGGCCCGCGTGTGAT CGACGACCACGTCAAAAAGAATATGAAGGCGGTCCTAGACGACATCCAAAATGGCGCCTTCGCTAAGCGTTTCATCGCCG ATCAGGATGCCGGTGCTCCACAGTCCAAGAAATTTCGCGAGGGTGAGGCAAAGCATCCGATCGAGGCCACCGGTAAAGAG CTTCGCAAGATGTACTCCTGGCTGGCAGCTGCTGATGACGACTACACCGAAGGCAGCGTGGCTCGTTGA
Upstream 100 bases:
>100_bases CCCTCAACCGTGGTGTGGCTGTTCTCGGGGCGAAACGCCCCGGGTGACGTTCCCTAGATCCCAAGACAACCCAGACCCCC AACAAGGAGAGAAATACGCT
Downstream 100 bases:
>100_bases GCCTGCTGGCCTGACGTTGAGGGCCCGTAGGTACCGCGGGCCCTCAATTCTGTATCCTCTGCCTCGTCAGCCTCGAGCAG ATAGCCGACAGGCAACGATG
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MAKIYYDDDADLSIIQNRQVAVIGYGSQGHAHALNLRDSGVDVRVGLRDGSSSIAKAEAQGLRVLSIEDACEEADLIMVL VPDQNQRQLYAEHIAPHLKDGDALFFAHGFNVHFGYIKAPQGVDVCMVAPKGPGHIVRREYSDGRGVPVLVCVEQDASGI AWDLTRSYAKALGGLRAGGIETSFREETETDLFGEQAVLCGGLSHLIQAGFETLVTAGYQPEMAYFEVCHEMKMIVDLII EGGISKLRWSISDTAEYGDYVSGPRVIDDHVKKNMKAVLDDIQNGAFAKRFIADQDAGAPQSKKFREGEAKHPIEATGKE LRKMYSWLAAADDDYTEGSVAR
Sequences:
>Translated_342_residues MAKIYYDDDADLSIIQNRQVAVIGYGSQGHAHALNLRDSGVDVRVGLRDGSSSIAKAEAQGLRVLSIEDACEEADLIMVL VPDQNQRQLYAEHIAPHLKDGDALFFAHGFNVHFGYIKAPQGVDVCMVAPKGPGHIVRREYSDGRGVPVLVCVEQDASGI AWDLTRSYAKALGGLRAGGIETSFREETETDLFGEQAVLCGGLSHLIQAGFETLVTAGYQPEMAYFEVCHEMKMIVDLII EGGISKLRWSISDTAEYGDYVSGPRVIDDHVKKNMKAVLDDIQNGAFAKRFIADQDAGAPQSKKFREGEAKHPIEATGKE LRKMYSWLAAADDDYTEGSVAR >Mature_341_residues AKIYYDDDADLSIIQNRQVAVIGYGSQGHAHALNLRDSGVDVRVGLRDGSSSIAKAEAQGLRVLSIEDACEEADLIMVLV PDQNQRQLYAEHIAPHLKDGDALFFAHGFNVHFGYIKAPQGVDVCMVAPKGPGHIVRREYSDGRGVPVLVCVEQDASGIA WDLTRSYAKALGGLRAGGIETSFREETETDLFGEQAVLCGGLSHLIQAGFETLVTAGYQPEMAYFEVCHEMKMIVDLIIE GGISKLRWSISDTAEYGDYVSGPRVIDDHVKKNMKAVLDDIQNGAFAKRFIADQDAGAPQSKKFREGEAKHPIEATGKEL RKMYSWLAAADDDYTEGSVAR
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=319, Percent_Identity=33.5423197492163, Blast_Score=153, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323387, Length=324, Percent_Identity=31.4814814814815, Blast_Score=128, Evalue=1e-30,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_PROAC (Q6A7Z2)
Other databases:
- EMBL: AE017283 - RefSeq: YP_056081.1 - ProteinModelPortal: Q6A7Z2 - SMR: Q6A7Z2 - GeneID: 2931623 - GenomeReviews: AE017283_GR - KEGG: pac:PPA1372 - NMPDR: fig|267747.1.peg.1358 - HOGENOM: HBG286525 - OMA: MAYAKGI - ProtClustDB: PRK05479 - BioCyc: PACN267747:PPA1372-MONOMER - BRENDA: 1.1.1.86 - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 37367; Mature: 37236
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: ACT_SITE 108-108
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIYYDDDADLSIIQNRQVAVIGYGSQGHAHALNLRDSGVDVRVGLRDGSSSIAKAEAQ CCEEEECCCCCEEEECCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHC GLRVLSIEDACEEADLIMVLVPDQNQRQLYAEHIAPHLKDGDALFFAHGFNVHFGYIKAP CEEEEEEHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEEECC QGVDVCMVAPKGPGHIVRREYSDGRGVPVLVCVEQDASGIAWDLTRSYAKALGGLRAGGI CCCCEEEECCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC ETSFREETETDLFGEQAVLCGGLSHLIQAGFETLVTAGYQPEMAYFEVCHEMKMIVDLII CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EGGISKLRWSISDTAEYGDYVSGPRVIDDHVKKNMKAVLDDIQNGAFAKRFIADQDAGAP HCCHHHEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC QSKKFREGEAKHPIEATGKELRKMYSWLAAADDDYTEGSVAR CCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AKIYYDDDADLSIIQNRQVAVIGYGSQGHAHALNLRDSGVDVRVGLRDGSSSIAKAEAQ CEEEECCCCCEEEECCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHC GLRVLSIEDACEEADLIMVLVPDQNQRQLYAEHIAPHLKDGDALFFAHGFNVHFGYIKAP CEEEEEEHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEEECC QGVDVCMVAPKGPGHIVRREYSDGRGVPVLVCVEQDASGIAWDLTRSYAKALGGLRAGGI CCCCEEEECCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCC ETSFREETETDLFGEQAVLCGGLSHLIQAGFETLVTAGYQPEMAYFEVCHEMKMIVDLII CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EGGISKLRWSISDTAEYGDYVSGPRVIDDHVKKNMKAVLDDIQNGAFAKRFIADQDAGAP HCCHHHEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC QSKKFREGEAKHPIEATGKELRKMYSWLAAADDDYTEGSVAR CCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA