| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is 50842823
Identifier: 50842823
GI number: 50842823
Start: 1463646
End: 1463927
Strand: Direct
Name: 50842823
Synonym: PPA2387
Alternate gene names: NA
Gene position: 1463646-1463927 (Clockwise)
Preceding gene: 50842822
Following gene: 50842825
Centisome position: 57.17
GC content: 54.26
Gene sequence:
>282_bases ATGGGCTCCGCTAGGACAGGTTCATGGCCATCATGCAAGGACACCCAACCTAGCCAGAAGGAGACGAACTCACCGTGCCA ACATCAGTCAGATCACGAAACTCATCAAGGCATCCATTCAGCAATGGCCCGCGATATCCGCATGACGCAAAACCAGAACA GCACGTTGAAACAGCAGGCATCGAACATCTCCACTGTCAAGAACCTCGCCACCAAAATGTGGAAGATCAGGACGCCCTAT GACCCATCTGGTGCTACGCGCTCGAGAACCAGGCCGCCTTGA
Upstream 100 bases:
>100_bases CCACTCGCAAGCTTTCCACCGCCCAAATACGGGCCGATATGGCGGGAATCTACAGTTCGGCGCCTCACAAGTCCGACCAC GACGACGACCCCGGACCTTG
Downstream 100 bases:
>100_bases ATCCAAGCTCTTCGACATCAAAAGGAAGGTAAAATGATGACTGACAAGGCTTTTTAGACTGGTGAGAGTGAACGCGCCCT CAAGACATTCTCCAGACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MGSARTGSWPSCKDTQPSQKETNSPCQHQSDHETHQGIHSAMARDIRMTQNQNSTLKQQASNISTVKNLATKMWKIRTPY DPSGATRSRTRPP
Sequences:
>Translated_93_residues MGSARTGSWPSCKDTQPSQKETNSPCQHQSDHETHQGIHSAMARDIRMTQNQNSTLKQQASNISTVKNLATKMWKIRTPY DPSGATRSRTRPP >Mature_92_residues GSARTGSWPSCKDTQPSQKETNSPCQHQSDHETHQGIHSAMARDIRMTQNQNSTLKQQASNISTVKNLATKMWKIRTPYD PSGATRSRTRPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10408; Mature: 10276
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSARTGSWPSCKDTQPSQKETNSPCQHQSDHETHQGIHSAMARDIRMTQNQNSTLKQQA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH SNISTVKNLATKMWKIRTPYDPSGATRSRTRPP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GSARTGSWPSCKDTQPSQKETNSPCQHQSDHETHQGIHSAMARDIRMTQNQNSTLKQQA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH SNISTVKNLATKMWKIRTPYDPSGATRSRTRPP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA