| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is secA
Identifier: 50842813
GI number: 50842813
Start: 1452303
End: 1455008
Strand: Reverse
Name: secA
Synonym: PPA1333
Alternate gene names: 50842813
Gene position: 1455008-1452303 (Counterclockwise)
Preceding gene: 50842814
Following gene: 50842811
Centisome position: 56.83
GC content: 58.68
Gene sequence:
>2706_bases GTGAACCTCATGGATCGCGTGCTGCACGCCGGTGAAGGCAAGATCATCCGCCGACTCAACCGCATTGTCGGCCAGGTTAA CAGCATTGAGGAGGACTACGTCGCCATGGACGACGACGAGTTGGCCGGTCAGACCGCCGACTTCCGTCAACGTCTTGACA ATGGCGAGAGTCTGGATCGTCTCCTCCCAGAAGCCTTCGCGACGGTACGTGAAGCCTCAAAGCGCGTGCTGGGTAAGCGA CACTTCGATGTTCAGATCATGGGTGGTGCAGCCCTCCACCAATGCAACATTGCCGAGATGAAGACCGGTGAAGGCAAGAC GCTGGTCGGTTTGCTTCCTGCCTACCTCGAGGGCCTGCTCGGCGAGGGTGTACATATCGTCACCGTCAATGACTACCTGG CCCGAGTGCAGTCAGAGCAGATGGGCCGTGTGCACCGGTTCCTAGGATTGTCGATCTCGGCGATCCTGTCGGACATGCCG CCGATGGCCCGCAAGGAGGCCTATAAGGCCGACGTCACCTATGGCACGAACAACGAGTTTGGCTTCGACTACCTGCGTGA CAATATGGCCAGTTCGCTCAGCGAGTGCGTGCAGCGCGGTCACCATTACGCGATTGTTGACGAGGTTGACTCCATTCTCG TTGACGAAGCTCGTACCCCGCTGATCATCTCTGGACCTGCCGAGGAGAACAAGCAGTGGTACCCGGAATTCGCCAAGATC GTCTCGCGGCTCGAACGCGACGTTGACTACGAGGTGGACGAGAAGAAACGCACCGTCTCTGTACTTGGGCACGGAATTAC CGTCGTTGAGGAGAGGCTCGGTATCGAGAACCTTTACGAGTCAGCGAACACTCCGCTTATCGGGTACCTCAACAACGCCA TCAAGGCCAAGGAGCTTTTCCACCGCGACAAGGACTACGTCGTCGTCGGTGGTGAAGTCCTTATCGTTGACGAGCACACC GGCCGGACTCTTGCTGGCCGTCGTTACAACGAAGGCCTCCACCAAGCCCTTGAGGCCAAAGAACACGTCGAGATCAAGGA CGAGTATCAGACTCTCGCCACGATCACCCTGCAGAATTACTTCCGCATGTACGACAAGCTCGCCGGCATGACGGGTACAG CTAAGACCGAGGAAAGCGAGTTCCAGAAGATTTACGGTCTGGGAGTCATCCCGATCCCGACGAACCGTCCGATGATCCGC AAAGATCAGAAGGACCTCATTTACCGCACCGAGGATGCCAAGTTCGACGCCATTATCGCCGATGTTGTTGAGCGTCACGA GGCGGGCCAGCCGATCCTTATCGGCACTGCGTCGGTGGCCAAGTCGGAGCTGCTTTCCGAAAAGCTCAAGCGTGCCGGTG TTCCGCACAAGGTGCTGAACGCCAAGCACCATGAGTCTGAAGCCGCTATTGTCGCCCTGGCTGGCCGTAAGGGGGCCGTG ACGGTGTCGACGAATATGGCTGGCCGTGGTACCGACATTATCCTCGGCGGCAACCCCGAGTTCCTCACCGAGCTTGACCT GCGGGAAAAGGGCTTGGACCCCCTCGAGGACCAGGACGCGTACCAGACTGCGTGGAACAACACCCTGGCCAAGTACGAGG AACAGTCCCAGGCTGAACACAATGAGGTCGAGGGGCTTGGCGGCCTTTATGTCATTGGCTCGGAACGTCACGAGTCTCGC CGTATCGACAATCAGCTGCGAGGACGTTCCGGTCGACAGGGCGACCCCGGTGAGTCGCGGTTCTATCTGTCGCTGCAGGA CGAGCTCATGCGGCTATTCAAGCCCGAGGTCATTGACCGTGCCATGGTGACCCTCAAAATGCCCGAGGATATGCCCATCG AATCGAAGTGGGTGTCGCGACAGATTGAGAGTGCCCAGAAGCAGGTCGAAGCGCAGAACTTCGAGATGCGAAAGAACGTC CTTAAGTACGACGATGTCATGAACCGTCAGCGTCACGTCATCTATGGCGACCGTCGCAAAGTCTTGGAGGGGGCTGACGT CGAGACCGAGTTGCGTGCGACTACCGACCGCGTTGTCGAGGCGGGCGTCCGCAAGTACGCCGAGGGTTACTCGGAGGACT GGGACCTTGAGGCAATGTGGAACGAGATTGGGACTGTATATCCGGTTGGTTTGGATCTTGATGAGTATGCCGATTGCCAG GACGTTGAGGAACTTATTGAGGACTTTAAGGCCGACGCCCAGGAGGCCTACGATCGCCGCGAGTCCGAACTCGGCGAGGC AACTATGCGGCAGCTTGAGCGTGAAGTCCTACTGACGGTGTTGGATCGCAAATGGCGCGAGCACCTCTACGAGATGGACT ACTTACGCGAAGGCATCGGTCTGCGAGCCATGGCGCAGCGTGATCCGTTGGTCGAGTACCAGCGCGAAGGTGGCGACATG TTCAACTCGATGATGGATTCTTTCAAGGAGGAGGTCGTCGGGTTCCTGTTCAACCTCGAGATTGAAACCGGCCCGCAGGT CGGCCTGGTCACCGACGATGGGGGCAACCCGGTCACGGCTGACTCAGTGCTCCCCAAGGTGAATCGTCCACGACGGGCTT TGACCTATTCGGCGCCGGATGAGCAGGGCGAGGCAGAGACAACCTCAGAAGACGGACAGAAGCCCCGCGGCGAGGGGAAC CGCGCCGCCAGAAGGTCCGCGGCGTCGAAGAAGCCAAAGAATCGCCGCAATAAGAAGCGTCGGTGA
Upstream 100 bases:
>100_bases GGCCGGGGACCCCCTAGGATGGGGGCGGTGGCTTCACTACGCCACTCGTCGGGCATATGCTCAGACGGTTACGACGTCTA CTCCTTGAAGGACCCGCCCC
Downstream 100 bases:
>100_bases GTGGTCGACGGCGCCAGTTCCACGTGGCTGGCGCCGTCGTTATCATCCCAGCCCGACGGTCTCACAGGTGATTTTCTTCA ACGTTAATAACGTGGCCACC
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 901; Mature: 901
Protein sequence:
>901_residues MNLMDRVLHAGEGKIIRRLNRIVGQVNSIEEDYVAMDDDELAGQTADFRQRLDNGESLDRLLPEAFATVREASKRVLGKR HFDVQIMGGAALHQCNIAEMKTGEGKTLVGLLPAYLEGLLGEGVHIVTVNDYLARVQSEQMGRVHRFLGLSISAILSDMP PMARKEAYKADVTYGTNNEFGFDYLRDNMASSLSECVQRGHHYAIVDEVDSILVDEARTPLIISGPAEENKQWYPEFAKI VSRLERDVDYEVDEKKRTVSVLGHGITVVEERLGIENLYESANTPLIGYLNNAIKAKELFHRDKDYVVVGGEVLIVDEHT GRTLAGRRYNEGLHQALEAKEHVEIKDEYQTLATITLQNYFRMYDKLAGMTGTAKTEESEFQKIYGLGVIPIPTNRPMIR KDQKDLIYRTEDAKFDAIIADVVERHEAGQPILIGTASVAKSELLSEKLKRAGVPHKVLNAKHHESEAAIVALAGRKGAV TVSTNMAGRGTDIILGGNPEFLTELDLREKGLDPLEDQDAYQTAWNNTLAKYEEQSQAEHNEVEGLGGLYVIGSERHESR RIDNQLRGRSGRQGDPGESRFYLSLQDELMRLFKPEVIDRAMVTLKMPEDMPIESKWVSRQIESAQKQVEAQNFEMRKNV LKYDDVMNRQRHVIYGDRRKVLEGADVETELRATTDRVVEAGVRKYAEGYSEDWDLEAMWNEIGTVYPVGLDLDEYADCQ DVEELIEDFKADAQEAYDRRESELGEATMRQLEREVLLTVLDRKWREHLYEMDYLREGIGLRAMAQRDPLVEYQREGGDM FNSMMDSFKEEVVGFLFNLEIETGPQVGLVTDDGGNPVTADSVLPKVNRPRRALTYSAPDEQGEAETTSEDGQKPRGEGN RAARRSAASKKPKNRRNKKRR
Sequences:
>Translated_901_residues MNLMDRVLHAGEGKIIRRLNRIVGQVNSIEEDYVAMDDDELAGQTADFRQRLDNGESLDRLLPEAFATVREASKRVLGKR HFDVQIMGGAALHQCNIAEMKTGEGKTLVGLLPAYLEGLLGEGVHIVTVNDYLARVQSEQMGRVHRFLGLSISAILSDMP PMARKEAYKADVTYGTNNEFGFDYLRDNMASSLSECVQRGHHYAIVDEVDSILVDEARTPLIISGPAEENKQWYPEFAKI VSRLERDVDYEVDEKKRTVSVLGHGITVVEERLGIENLYESANTPLIGYLNNAIKAKELFHRDKDYVVVGGEVLIVDEHT GRTLAGRRYNEGLHQALEAKEHVEIKDEYQTLATITLQNYFRMYDKLAGMTGTAKTEESEFQKIYGLGVIPIPTNRPMIR KDQKDLIYRTEDAKFDAIIADVVERHEAGQPILIGTASVAKSELLSEKLKRAGVPHKVLNAKHHESEAAIVALAGRKGAV TVSTNMAGRGTDIILGGNPEFLTELDLREKGLDPLEDQDAYQTAWNNTLAKYEEQSQAEHNEVEGLGGLYVIGSERHESR RIDNQLRGRSGRQGDPGESRFYLSLQDELMRLFKPEVIDRAMVTLKMPEDMPIESKWVSRQIESAQKQVEAQNFEMRKNV LKYDDVMNRQRHVIYGDRRKVLEGADVETELRATTDRVVEAGVRKYAEGYSEDWDLEAMWNEIGTVYPVGLDLDEYADCQ DVEELIEDFKADAQEAYDRRESELGEATMRQLEREVLLTVLDRKWREHLYEMDYLREGIGLRAMAQRDPLVEYQREGGDM FNSMMDSFKEEVVGFLFNLEIETGPQVGLVTDDGGNPVTADSVLPKVNRPRRALTYSAPDEQGEAETTSEDGQKPRGEGN RAARRSAASKKPKNRRNKKRR >Mature_901_residues MNLMDRVLHAGEGKIIRRLNRIVGQVNSIEEDYVAMDDDELAGQTADFRQRLDNGESLDRLLPEAFATVREASKRVLGKR HFDVQIMGGAALHQCNIAEMKTGEGKTLVGLLPAYLEGLLGEGVHIVTVNDYLARVQSEQMGRVHRFLGLSISAILSDMP PMARKEAYKADVTYGTNNEFGFDYLRDNMASSLSECVQRGHHYAIVDEVDSILVDEARTPLIISGPAEENKQWYPEFAKI VSRLERDVDYEVDEKKRTVSVLGHGITVVEERLGIENLYESANTPLIGYLNNAIKAKELFHRDKDYVVVGGEVLIVDEHT GRTLAGRRYNEGLHQALEAKEHVEIKDEYQTLATITLQNYFRMYDKLAGMTGTAKTEESEFQKIYGLGVIPIPTNRPMIR KDQKDLIYRTEDAKFDAIIADVVERHEAGQPILIGTASVAKSELLSEKLKRAGVPHKVLNAKHHESEAAIVALAGRKGAV TVSTNMAGRGTDIILGGNPEFLTELDLREKGLDPLEDQDAYQTAWNNTLAKYEEQSQAEHNEVEGLGGLYVIGSERHESR RIDNQLRGRSGRQGDPGESRFYLSLQDELMRLFKPEVIDRAMVTLKMPEDMPIESKWVSRQIESAQKQVEAQNFEMRKNV LKYDDVMNRQRHVIYGDRRKVLEGADVETELRATTDRVVEAGVRKYAEGYSEDWDLEAMWNEIGTVYPVGLDLDEYADCQ DVEELIEDFKADAQEAYDRRESELGEATMRQLEREVLLTVLDRKWREHLYEMDYLREGIGLRAMAQRDPLVEYQREGGDM FNSMMDSFKEEVVGFLFNLEIETGPQVGLVTDDGGNPVTADSVLPKVNRPRRALTYSAPDEQGEAETTSEDGQKPRGEGN RAARRSAASKKPKNRRNKKRR
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular mo
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family
Homologues:
Organism=Escherichia coli, GI1786287, Length=850, Percent_Identity=49.4117647058824, Blast_Score=796, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SECA_PROAC (Q6A833)
Other databases:
- EMBL: AE017283 - RefSeq: YP_056040.1 - HSSP: P0A5Y8 - ProteinModelPortal: Q6A833 - SMR: Q6A833 - GeneID: 2931940 - GenomeReviews: AE017283_GR - KEGG: pac:PPA1333 - NMPDR: fig|267747.1.peg.1317 - HOGENOM: HBG284200 - OMA: IEAKMVS - ProtClustDB: PRK12904 - BioCyc: PACN267747:PPA1333-MONOMER - GO: GO:0005737 - HAMAP: MF_01382 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 - Gene3D: G3DSA:1.10.3060.10 - PRINTS: PR00906 - SMART: SM00957 - SMART: SM00958 - TIGRFAMs: TIGR00963
Pfam domain/function: PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW; SSF81767 SecA_PP_bd; SSF81886 SecA_SW
EC number: NA
Molecular weight: Translated: 101866; Mature: 101866
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS01312 SECA; PS51196 SECA_MOTOR_DEAD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLMDRVLHAGEGKIIRRLNRIVGQVNSIEEDYVAMDDDELAGQTADFRQRLDNGESLDR CCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHEECCCHHHCCCCHHHHHHCCCCCHHHH LLPEAFATVREASKRVLGKRHFDVQIMGGAALHQCNIAEMKTGEGKTLVGLLPAYLEGLL HHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHH GEGVHIVTVNDYLARVQSEQMGRVHRFLGLSISAILSDMPPMARKEAYKADVTYGTNNEF CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCCCCC GFDYLRDNMASSLSECVQRGHHYAIVDEVDSILVDEARTPLIISGPAEENKQWYPEFAKI CHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHH VSRLERDVDYEVDEKKRTVSVLGHGITVVEERLGIENLYESANTPLIGYLNNAIKAKELF HHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHH HRDKDYVVVGGEVLIVDEHTGRTLAGRRYNEGLHQALEAKEHVEIKDEYQTLATITLQNY HCCCCEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FRMYDKLAGMTGTAKTEESEFQKIYGLGVIPIPTNRPMIRKDQKDLIYRTEDAKFDAIIA HHHHHHHCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCHHHEEECCCCHHHHHHH DVVERHEAGQPILIGTASVAKSELLSEKLKRAGVPHKVLNAKHHESEAAIVALAGRKGAV HHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEECCCCEE TVSTNMAGRGTDIILGGNPEFLTELDLREKGLDPLEDQDAYQTAWNNTLAKYEEQSQAEH EEECCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH NEVEGLGGLYVIGSERHESRRIDNQLRGRSGRQGDPGESRFYLSLQDELMRLFKPEVIDR HHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCHHHHHH AMVTLKMPEDMPIESKWVSRQIESAQKQVEAQNFEMRKNVLKYDDVMNRQRHVIYGDRRK HHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHH VLEGADVETELRATTDRVVEAGVRKYAEGYSEDWDLEAMWNEIGTVYPVGLDLDEYADCQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEECCCCHHHCCCHH DVEELIEDFKADAQEAYDRRESELGEATMRQLEREVLLTVLDRKWREHLYEMDYLREGIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LRAMAQRDPLVEYQREGGDMFNSMMDSFKEEVVGFLFNLEIETGPQVGLVTDDGGNPVTA CCHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCEEH DSVLPKVNRPRRALTYSAPDEQGEAETTSEDGQKPRGEGNRAARRSAASKKPKNRRNKKR HHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCC R C >Mature Secondary Structure MNLMDRVLHAGEGKIIRRLNRIVGQVNSIEEDYVAMDDDELAGQTADFRQRLDNGESLDR CCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHEECCCHHHCCCCHHHHHHCCCCCHHHH LLPEAFATVREASKRVLGKRHFDVQIMGGAALHQCNIAEMKTGEGKTLVGLLPAYLEGLL HHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHH GEGVHIVTVNDYLARVQSEQMGRVHRFLGLSISAILSDMPPMARKEAYKADVTYGTNNEF CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCCCCC GFDYLRDNMASSLSECVQRGHHYAIVDEVDSILVDEARTPLIISGPAEENKQWYPEFAKI CHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHH VSRLERDVDYEVDEKKRTVSVLGHGITVVEERLGIENLYESANTPLIGYLNNAIKAKELF HHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHH HRDKDYVVVGGEVLIVDEHTGRTLAGRRYNEGLHQALEAKEHVEIKDEYQTLATITLQNY HCCCCEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FRMYDKLAGMTGTAKTEESEFQKIYGLGVIPIPTNRPMIRKDQKDLIYRTEDAKFDAIIA HHHHHHHCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCHHHEEECCCCHHHHHHH DVVERHEAGQPILIGTASVAKSELLSEKLKRAGVPHKVLNAKHHESEAAIVALAGRKGAV HHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEECCCCEE TVSTNMAGRGTDIILGGNPEFLTELDLREKGLDPLEDQDAYQTAWNNTLAKYEEQSQAEH EEECCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH NEVEGLGGLYVIGSERHESRRIDNQLRGRSGRQGDPGESRFYLSLQDELMRLFKPEVIDR HHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCHHHHHH AMVTLKMPEDMPIESKWVSRQIESAQKQVEAQNFEMRKNVLKYDDVMNRQRHVIYGDRRK HHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHH VLEGADVETELRATTDRVVEAGVRKYAEGYSEDWDLEAMWNEIGTVYPVGLDLDEYADCQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEECCCCHHHCCCHH DVEELIEDFKADAQEAYDRRESELGEATMRQLEREVLLTVLDRKWREHLYEMDYLREGIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LRAMAQRDPLVEYQREGGDMFNSMMDSFKEEVVGFLFNLEIETGPQVGLVTDDGGNPVTA CCHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCEEH DSVLPKVNRPRRALTYSAPDEQGEAETTSEDGQKPRGEGNRAARRSAASKKPKNRRNKKR HHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA