| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842784
Identifier: 50842784
GI number: 50842784
Start: 1412439
End: 1412951
Strand: Reverse
Name: 50842784
Synonym: PPA1304
Alternate gene names: NA
Gene position: 1412951-1412439 (Counterclockwise)
Preceding gene: 50842786
Following gene: 50842783
Centisome position: 55.19
GC content: 58.28
Gene sequence:
>513_bases GTGAGGTCGACCGCTCTGCCGTGCGGGTTGTCGCGCGGTTGGATAAGAGTCTCGGCGTCGGGTGTGGGAGCTCATTTTGG GCTGCGCGGTGTCACGTCAGGATCTCAGTGTATTCAGGGTGATATGACGCCCCATCAGGTGTCTACGGGGTCGTCTTTGC TTTCGGTGCTGGTGATCCGGGGACGAAGTTGCCGTATCGGCGGATCAATTCGTGCTCGTGGTGGATCGGTGATCCCACTG CCCCTGATTACAACCGGTGGCGTCAGGACTGTCGCGCGTTGTCGAAGTCGGACAACGAGCTACGTGGGCCGTCAGTACCG GCAAGCAGCCGTACTGGATTTCAACTATGGCTCGCCGGCGCGTCATGGTGCCGAGTCGGGGGCAGCGATCTTTTTGCATT ATGCGACGCGTTACACTGCTGGGTGTGTGAGTATGGACTCACTGTCAAAGCTGACTAACACGCTGCGATGGATTGACCCG GCTCAGAATCCCAAGATCATTATCTTGGGGTGA
Upstream 100 bases:
>100_bases TTAAGGATAATGCGCGCAGTAAATATTGTACGACGCTGTGGGGTCATAAGCCGAGCGTTCGAAAACGACCGTTTTCGGGC GCGTCGAGGGGTGGCGTGTA
Downstream 100 bases:
>100_bases GATCGTGATTCATGCTGTCGCCTGCATGACTTCCTTGTAGCGCGTGCATGTGAGGTGATGTTAGCTTGCGGCATCGAGGT AGTCGATGAGGGCGGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRSTALPCGLSRGWIRVSASGVGAHFGLRGVTSGSQCIQGDMTPHQVSTGSSLLSVLVIRGRSCRIGGSIRARGGSVIPL PLITTGGVRTVARCRSRTTSYVGRQYRQAAVLDFNYGSPARHGAESGAAIFLHYATRYTAGCVSMDSLSKLTNTLRWIDP AQNPKIIILG
Sequences:
>Translated_170_residues MRSTALPCGLSRGWIRVSASGVGAHFGLRGVTSGSQCIQGDMTPHQVSTGSSLLSVLVIRGRSCRIGGSIRARGGSVIPL PLITTGGVRTVARCRSRTTSYVGRQYRQAAVLDFNYGSPARHGAESGAAIFLHYATRYTAGCVSMDSLSKLTNTLRWIDP AQNPKIIILG >Mature_170_residues MRSTALPCGLSRGWIRVSASGVGAHFGLRGVTSGSQCIQGDMTPHQVSTGSSLLSVLVIRGRSCRIGGSIRARGGSVIPL PLITTGGVRTVARCRSRTTSYVGRQYRQAAVLDFNYGSPARHGAESGAAIFLHYATRYTAGCVSMDSLSKLTNTLRWIDP AQNPKIIILG
Specific function: Unknown
COG id: COG3786
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17992; Mature: 17992
Theoretical pI: Translated: 11.68; Mature: 11.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTALPCGLSRGWIRVSASGVGAHFGLRGVTSGSQCIQGDMTPHQVSTGSSLLSVLVIR CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCEECCHHHHHHHHHHC GRSCRIGGSIRARGGSVIPLPLITTGGVRTVARCRSRTTSYVGRQYRQAAVLDFNYGSPA CCCEEECCCEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC RHGAESGAAIFLHYATRYTAGCVSMDSLSKLTNTLRWIDPAQNPKIIILG CCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC >Mature Secondary Structure MRSTALPCGLSRGWIRVSASGVGAHFGLRGVTSGSQCIQGDMTPHQVSTGSSLLSVLVIR CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCEECCHHHHHHHHHHC GRSCRIGGSIRARGGSVIPLPLITTGGVRTVARCRSRTTSYVGRQYRQAAVLDFNYGSPA CCCEEECCCEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC RHGAESGAAIFLHYATRYTAGCVSMDSLSKLTNTLRWIDPAQNPKIIILG CCCCCCCCEEEEEECHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA