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The map label for this gene is dppC [H]

Identifier: 50842754

GI number: 50842754

Start: 1382201

End: 1383013

Strand: Reverse

Name: dppC [H]

Synonym: PPA1275

Alternate gene names: 50842754

Gene position: 1383013-1382201 (Counterclockwise)

Preceding gene: 50842755

Following gene: 50842753

Centisome position: 54.02

GC content: 60.02

Gene sequence:

>813_bases
ATGAAACGGGCAGGTCTGGTCATTGGATGTGTGCTGGTTGGAATCGTCGTCATCGCGGGGGCGACTTCCGCAGTGTGGAC
TCCGCACGATCCCAATCTTGTTGTCCCAGCTGAACGGCTGATGGGGCCTAATGGGCAGTACTGGCTAGGCACTGACGGAT
TCGGTTCCGATATTGCCTCGCGAATGTTTGTGGGTGCTCGTACTTGTCTGCTCGTTGGCGTGGTCTCAGTGCTCATAGCA
GCTGGTATCGGGGTGCCTTGGGGGGTTACCTCGGCAATGCTGCCTCGTCCGTGGTCAACAGTCGTTGGTCGAGCCGCAGA
CCTTCTCTACGCTTTCCCGGCCCTGTTGCTTGCCATCATCCTGGCGGCTGCCGTAGGCGGATCGACGCTGACAGGGATGA
TTGCGATCGGGGTATCGACGGTGCCAGTGTTCGCACGCATTACCCGAACTGCCAGCCGCCAGATCCTCGCGCAGGACTAT
GTGGTTGCCGCGCGCAGCTCCGGGATGGCATGGAGGTCTGTGGCTTTTAACCATGTTCTTCCCAATATCGCTCCACTGAT
TGGGGTGCAGGCCTCTGTCTCCTATGGCACGGCGATCTTGGCCGAGGCTGCGCTGAGCTACCTCGGTTTAGCGACACCGG
CGACCGTCCCGACCTGGGGGCGTATGCTGCGGGACTCGCAGGTGTACCTTTTTGATTCACCCTGGTTGACCGTGGCGCCA
GCCGTGGCTATCGCGGGAGCCGTGATGGGATTCACCCTTCTTGGTGACGGATTACGAGACTTCCTTGACCCGCGTTTGAG
GGAGGTTCGTTGA

Upstream 100 bases:

>100_bases
TGGCGATTGTGATGGCCATCTCTTATCTCACGGACCTCATCGTCGTCGTCCTCGATCCGCGCCTACGAACAACGATCCGC
GCTGCTCAGGAGGAGCATTC

Downstream 100 bases:

>100_bases
TGCCTTTGCTAGAGGTTAATGACTTGGTTGTCGACTTCGGACGGCATCGGCGGGTCGCTGTTGACCACGTGAGCTGGTCT
CTGGAAGCCGGTGAGCGACT

Product: permease protein of oligopeptide ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKRAGLVIGCVLVGIVVIAGATSAVWTPHDPNLVVPAERLMGPNGQYWLGTDGFGSDIASRMFVGARTCLLVGVVSVLIA
AGIGVPWGVTSAMLPRPWSTVVGRAADLLYAFPALLLAIILAAAVGGSTLTGMIAIGVSTVPVFARITRTASRQILAQDY
VVAARSSGMAWRSVAFNHVLPNIAPLIGVQASVSYGTAILAEAALSYLGLATPATVPTWGRMLRDSQVYLFDSPWLTVAP
AVAIAGAVMGFTLLGDGLRDFLDPRLREVR

Sequences:

>Translated_270_residues
MKRAGLVIGCVLVGIVVIAGATSAVWTPHDPNLVVPAERLMGPNGQYWLGTDGFGSDIASRMFVGARTCLLVGVVSVLIA
AGIGVPWGVTSAMLPRPWSTVVGRAADLLYAFPALLLAIILAAAVGGSTLTGMIAIGVSTVPVFARITRTASRQILAQDY
VVAARSSGMAWRSVAFNHVLPNIAPLIGVQASVSYGTAILAEAALSYLGLATPATVPTWGRMLRDSQVYLFDSPWLTVAP
AVAIAGAVMGFTLLGDGLRDFLDPRLREVR
>Mature_270_residues
MKRAGLVIGCVLVGIVVIAGATSAVWTPHDPNLVVPAERLMGPNGQYWLGTDGFGSDIASRMFVGARTCLLVGVVSVLIA
AGIGVPWGVTSAMLPRPWSTVVGRAADLLYAFPALLLAIILAAAVGGSTLTGMIAIGVSTVPVFARITRTASRQILAQDY
VVAARSSGMAWRSVAFNHVLPNIAPLIGVQASVSYGTAILAEAALSYLGLATPATVPTWGRMLRDSQVYLFDSPWLTVAP
AVAIAGAVMGFTLLGDGLRDFLDPRLREVR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=269, Percent_Identity=36.0594795539033, Blast_Score=164, Evalue=4e-42,
Organism=Escherichia coli, GI1787760, Length=238, Percent_Identity=36.5546218487395, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1789889, Length=245, Percent_Identity=31.8367346938775, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1789964, Length=237, Percent_Identity=37.1308016877637, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787498, Length=261, Percent_Identity=31.0344827586207, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787549, Length=214, Percent_Identity=33.1775700934579, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1788505, Length=231, Percent_Identity=25.974025974026, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28139; Mature: 28139

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAGLVIGCVLVGIVVIAGATSAVWTPHDPNLVVPAERLMGPNGQYWLGTDGFGSDIAS
CCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCEEECHHHHCCCCCCEEECCCCCCHHHHH
RMFVGARTCLLVGVVSVLIAAGIGVPWGVTSAMLPRPWSTVVGRAADLLYAFPALLLAII
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAAAVGGSTLTGMIAIGVSTVPVFARITRTASRQILAQDYVVAARSSGMAWRSVAFNHVL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
PNIAPLIGVQASVSYGTAILAEAALSYLGLATPATVPTWGRMLRDSQVYLFDSPWLTVAP
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCHHHHH
AVAIAGAVMGFTLLGDGLRDFLDPRLREVR
HHHHHHHHHHHHHHHHHHHHHHCHHHHHCC
>Mature Secondary Structure
MKRAGLVIGCVLVGIVVIAGATSAVWTPHDPNLVVPAERLMGPNGQYWLGTDGFGSDIAS
CCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCEEECHHHHCCCCCCEEECCCCCCHHHHH
RMFVGARTCLLVGVVSVLIAAGIGVPWGVTSAMLPRPWSTVVGRAADLLYAFPALLLAII
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAAAVGGSTLTGMIAIGVSTVPVFARITRTASRQILAQDYVVAARSSGMAWRSVAFNHVL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
PNIAPLIGVQASVSYGTAILAEAALSYLGLATPATVPTWGRMLRDSQVYLFDSPWLTVAP
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCHHHHH
AVAIAGAVMGFTLLGDGLRDFLDPRLREVR
HHHHHHHHHHHHHHHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]