| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842703
Identifier: 50842703
GI number: 50842703
Start: 1331298
End: 1331630
Strand: Reverse
Name: 50842703
Synonym: PPA1223
Alternate gene names: NA
Gene position: 1331630-1331298 (Counterclockwise)
Preceding gene: 50842704
Following gene: 50842698
Centisome position: 52.01
GC content: 55.26
Gene sequence:
>333_bases ATGGCCGACCGTGCGCTACGAGGCATGGGGTTAGGATCCAAGAGTTTTGAGGATGAAGAAGGCGTTGAGATGGCCGAACG CCAGCAAATTGGCTTTGACTGTCAAAACGGCCACCACTTCGAGCTCACTTTCTCCACCGAGGCAGAACTGCCGAGCTTGT GGGAGTGCCCGCGTTGCGGTGCAGAAGCGTTGCGTAGCGACGGTACTGATCCTCAGCGGAAGAAGCAGAAGCCGCAGCGC ACCCACTGGGACATGCTTACTGAACGCCGCTCGATACCCGAACTTGAAGAATTACTTGCCGAAAGGCTGGATGAAATCCG TAAGGAGAATTAA
Upstream 100 bases:
>100_bases AGTGGCCATCCGTTCTGCTCCCCGAGATTTGTGACTTGTGGGATGCTGGGGTTATTGAGGCCCAACCAGGGCCTGATGCC TACAAGCAGGAAGGAGCATC
Downstream 100 bases:
>100_bases TCCCGCCGAGGTGCGCCCCGCGGACGCGATGTGATCCATGGGGCGCACGTCTGGTCAGTGGCGAGAACGACGCTCTTTGA TGTCTCCGGCGATCTTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MADRALRGMGLGSKSFEDEEGVEMAERQQIGFDCQNGHHFELTFSTEAELPSLWECPRCGAEALRSDGTDPQRKKQKPQR THWDMLTERRSIPELEELLAERLDEIRKEN
Sequences:
>Translated_110_residues MADRALRGMGLGSKSFEDEEGVEMAERQQIGFDCQNGHHFELTFSTEAELPSLWECPRCGAEALRSDGTDPQRKKQKPQR THWDMLTERRSIPELEELLAERLDEIRKEN >Mature_109_residues ADRALRGMGLGSKSFEDEEGVEMAERQQIGFDCQNGHHFELTFSTEAELPSLWECPRCGAEALRSDGTDPQRKKQKPQRT HWDMLTERRSIPELEELLAERLDEIRKEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12732; Mature: 12601
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00202 RUBREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRALRGMGLGSKSFEDEEGVEMAERQQIGFDCQNGHHFELTFSTEAELPSLWECPRCG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC AEALRSDGTDPQRKKQKPQRTHWDMLTERRSIPELEELLAERLDEIRKEN HHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADRALRGMGLGSKSFEDEEGVEMAERQQIGFDCQNGHHFELTFSTEAELPSLWECPRCG CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC AEALRSDGTDPQRKKQKPQRTHWDMLTERRSIPELEELLAERLDEIRKEN HHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA