Click here to switch to the map view.

The map label for this gene is ycbL [C]

Identifier: 50842648

GI number: 50842648

Start: 1270161

End: 1270832

Strand: Direct

Name: ycbL [C]

Synonym: PPA1168

Alternate gene names: 50842648

Gene position: 1270161-1270832 (Clockwise)

Preceding gene: 50842646

Following gene: 50842649

Centisome position: 49.61

GC content: 59.82

Gene sequence:

>672_bases
GTGTTCATCGCGTCCTTTATCACAGGTCCTTTTCAGACCAATTGCTATCTGCTAGCGCGCGAACAGGGGTCTGAGTGCGT
CATCGTCGATCTCGGTATGGGCGCTGAAGAGTTCCTTGGTGATGCCCTGAGAACCCATCATCTCGTTCCAGTGGCGATCG
CTGTGACCCACGGCCACATCGACCATATTGGTTCTGCTCGACAGGTCGGGGACGAGTACGGCATCCCGGTGCTGTGCCCT
CGTGACGACCGTCACCTGCTCAGCGACCCGATGGCCGGGCTCTCCGATTTCGCCCGCCCGCTTATCGAACAGTGGTATGG
GTCGACGACCCTGCGTGAGCCAGAACAAGTCGTCGACGTCGAGCCCTTCTCCCATCACCAGTTCGCCAACCTCGACCTGG
AGTTCTTGCATGCACCGGGCCACACCCCGGGTTGTTCCATGATTCGTACGATCGACGCCGAGTTCGGTCCCATCGTCATG
TCAGGAGACGTCGTTTTTGCCGGATCTATCGGACGTACTGACATGCCAGGCGGCGACCCTGCCCAGATGTCATACAGCCT
CTCCGACGTCGTGTGGTCCCTGGATGATTCCACCCATGTGCTGCCCGGACACGGCGGACCAACGACGATGGCCAATGAAC
GTCTGACCAATCCGTTCTTGGGGCGCCGCTAG

Upstream 100 bases:

>100_bases
AGTTCGGACGTAAACGGTGCCGTCATCATCGACGCGGCCGAAGGACTGCGGAGCTTGTGCGTGACTCATACGCCCCATCT
TGCCCGATAAACTGCCAAAC

Downstream 100 bases:

>100_bases
GCCTCACCGCATGCGAATGCACCCGATCGCCCTCAGACTGGCACAATAAAGGCTGCGGGGTGACCCGCTGTTGTACTCAG
CTTTTCGAAGGATTTCCTCA

Product: metallo-beta-lactamase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MFIASFITGPFQTNCYLLAREQGSECVIVDLGMGAEEFLGDALRTHHLVPVAIAVTHGHIDHIGSARQVGDEYGIPVLCP
RDDRHLLSDPMAGLSDFARPLIEQWYGSTTLREPEQVVDVEPFSHHQFANLDLEFLHAPGHTPGCSMIRTIDAEFGPIVM
SGDVVFAGSIGRTDMPGGDPAQMSYSLSDVVWSLDDSTHVLPGHGGPTTMANERLTNPFLGRR

Sequences:

>Translated_223_residues
MFIASFITGPFQTNCYLLAREQGSECVIVDLGMGAEEFLGDALRTHHLVPVAIAVTHGHIDHIGSARQVGDEYGIPVLCP
RDDRHLLSDPMAGLSDFARPLIEQWYGSTTLREPEQVVDVEPFSHHQFANLDLEFLHAPGHTPGCSMIRTIDAEFGPIVM
SGDVVFAGSIGRTDMPGGDPAQMSYSLSDVVWSLDDSTHVLPGHGGPTTMANERLTNPFLGRR
>Mature_223_residues
MFIASFITGPFQTNCYLLAREQGSECVIVDLGMGAEEFLGDALRTHHLVPVAIAVTHGHIDHIGSARQVGDEYGIPVLCP
RDDRHLLSDPMAGLSDFARPLIEQWYGSTTLREPEQVVDVEPFSHHQFANLDLEFLHAPGHTPGCSMIRTIDAEFGPIVM
SGDVVFAGSIGRTDMPGGDPAQMSYSLSDVVWSLDDSTHVLPGHGGPTTMANERLTNPFLGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Escherichia coli, GI1787158, Length=216, Percent_Identity=34.2592592592593, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 24264; Mature: 24264

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIASFITGPFQTNCYLLAREQGSECVIVDLGMGAEEFLGDALRTHHLVPVAIAVTHGHI
CEEECEECCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCH
DHIGSARQVGDEYGIPVLCPRDDRHLLSDPMAGLSDFARPLIEQWYGSTTLREPEQVVDV
HHCCCHHHHHHHCCCEEECCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEC
EPFSHHQFANLDLEFLHAPGHTPGCSMIRTIDAEFGPIVMSGDVVFAGSIGRTDMPGGDP
CCCCCCEECCCCEEEEECCCCCCCCCEEEEECCCCCCEEEECCEEEECCCCCCCCCCCCH
AQMSYSLSDVVWSLDDSTHVLPGHGGPTTMANERLTNPFLGRR
HHEEEEHHHEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFIASFITGPFQTNCYLLAREQGSECVIVDLGMGAEEFLGDALRTHHLVPVAIAVTHGHI
CEEECEECCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCH
DHIGSARQVGDEYGIPVLCPRDDRHLLSDPMAGLSDFARPLIEQWYGSTTLREPEQVVDV
HHCCCHHHHHHHCCCEEECCCCCCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEC
EPFSHHQFANLDLEFLHAPGHTPGCSMIRTIDAEFGPIVMSGDVVFAGSIGRTDMPGGDP
CCCCCCEECCCCEEEEECCCCCCCCCEEEEECCCCCCEEEECCEEEECCCCCCCCCCCCH
AQMSYSLSDVVWSLDDSTHVLPGHGGPTTMANERLTNPFLGRR
HHEEEEHHHEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]