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The map label for this gene is yebC [C]

Identifier: 50842637

GI number: 50842637

Start: 1258280

End: 1259074

Strand: Direct

Name: yebC [C]

Synonym: PPA1157

Alternate gene names: 50842637

Gene position: 1258280-1259074 (Clockwise)

Preceding gene: 50842636

Following gene: 50842638

Centisome position: 49.15

GC content: 58.24

Gene sequence:

>795_bases
ATGAGCGGTCACTCCAAGTGGGCCACCACCAAGCACAAGAAGGCGGCCATTGACGCCAAGCGTGGCAAGCTTTTCGCTCG
CCTGATTAAGAATATTGAGGTGGCCGCCCGCCTCGGGGGTGGAGACCCGTCGGGCAACCCGACCCTCTACGACGCCATCC
AGAAGGCGAAAAAGAGCTCGGTTCCTAACGACAACATCACCCGTGCTGTTAAGCGTGGGTCTGGTGAGGGCGCTGACGCC
GTCAATTACGAGACGATTATGTACGAGGCCTATGGCCCCGCTGGCGTTGCCATCCTCATCGAGTGCCTGACTGACAATCG
CAATCGCGCCGTTTCTGACGTCCGCGTGGCCGTTACCCGCAACGGCGGAACCATGGCTGACGGTGGTTCTGTGCAGCGTC
TGTTCCAGCGCAAGGGTGTTGTCTCAGTCTCGAAGACCTACGAGGTTGAGGAGGGCCGCAAGACAGAGACCCGTGAGGTG
GATGAGGACCAGCTCATGGAGGCAACCATCGATGCTGAGCCTGAGGACATCGTTGATGAGGGCGAGGTCTTTGAGATTAT
TTCGGATCCGAGCGCTGTTGTTGATGTCCGTAAAGCCGTCCAGGGTGCCGGTATTGATTACGACTCCGCTGAGGTGTCGT
TCAAGCCAGACTTCACCCAGCGTGTCGAGCTTGAGGACGCCCGCAAGCTTTACAGGATCCTTGATGCTCTCGAAGATCTC
GACGACGTCCAGAACGTGTTCTCCAACGTTGATATCCCCGCCGAGGTTGCAGCAGCTCTTGACGAGGAGGAGTGA

Upstream 100 bases:

>100_bases
AGTGTAGACTGTTCCACTGTGTGCGTAGGCTCGTCCTGCGCCGGATGCTTAGCCCCGCTGGGCCAATAACTGCGACATTC
GAGGAAGGAAGACACCGTTC

Downstream 100 bases:

>100_bases
GCATTCCAAAGTCGACCCCCGACCGGCGTGTTACAAGGGTCATGGGGGTCGACCCTGGTTTAACCCGGTGCGGGGTTGGC
GTCGTTGAAGGTGGGTTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSGHSKWATTKHKKAAIDAKRGKLFARLIKNIEVAARLGGGDPSGNPTLYDAIQKAKKSSVPNDNITRAVKRGSGEGADA
VNYETIMYEAYGPAGVAILIECLTDNRNRAVSDVRVAVTRNGGTMADGGSVQRLFQRKGVVSVSKTYEVEEGRKTETREV
DEDQLMEATIDAEPEDIVDEGEVFEIISDPSAVVDVRKAVQGAGIDYDSAEVSFKPDFTQRVELEDARKLYRILDALEDL
DDVQNVFSNVDIPAEVAAALDEEE

Sequences:

>Translated_264_residues
MSGHSKWATTKHKKAAIDAKRGKLFARLIKNIEVAARLGGGDPSGNPTLYDAIQKAKKSSVPNDNITRAVKRGSGEGADA
VNYETIMYEAYGPAGVAILIECLTDNRNRAVSDVRVAVTRNGGTMADGGSVQRLFQRKGVVSVSKTYEVEEGRKTETREV
DEDQLMEATIDAEPEDIVDEGEVFEIISDPSAVVDVRKAVQGAGIDYDSAEVSFKPDFTQRVELEDARKLYRILDALEDL
DDVQNVFSNVDIPAEVAAALDEEE
>Mature_263_residues
SGHSKWATTKHKKAAIDAKRGKLFARLIKNIEVAARLGGGDPSGNPTLYDAIQKAKKSSVPNDNITRAVKRGSGEGADAV
NYETIMYEAYGPAGVAILIECLTDNRNRAVSDVRVAVTRNGGTMADGGSVQRLFQRKGVVSVSKTYEVEEGRKTETREVD
EDQLMEATIDAEPEDIVDEGEVFEIISDPSAVVDVRKAVQGAGIDYDSAEVSFKPDFTQRVELEDARKLYRILDALEDLD
DVQNVFSNVDIPAEVAAALDEEE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=255, Percent_Identity=29.0196078431373, Blast_Score=124, Evalue=9e-29,
Organism=Escherichia coli, GI1788171, Length=262, Percent_Identity=47.3282442748092, Blast_Score=229, Evalue=1e-61,
Organism=Escherichia coli, GI1788294, Length=248, Percent_Identity=31.0483870967742, Blast_Score=112, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17556100, Length=251, Percent_Identity=23.9043824701195, Blast_Score=71, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=31.8181818181818, Blast_Score=114, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24583305, Length=257, Percent_Identity=25.2918287937743, Blast_Score=74, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1157_PROAC (Q6A8L0)

Other databases:

- EMBL:   AE017283
- RefSeq:   YP_055864.1
- ProteinModelPortal:   Q6A8L0
- SMR:   Q6A8L0
- GeneID:   2933009
- GenomeReviews:   AE017283_GR
- KEGG:   pac:PPA1157
- NMPDR:   fig|267747.1.peg.1141
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   PACN267747:PPA1157-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 28738; Mature: 28607

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWATTKHKKAAIDAKRGKLFARLIKNIEVAARLGGGDPSGNPTLYDAIQKAKKSS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCC
VPNDNITRAVKRGSGEGADAVNYETIMYEAYGPAGVAILIECLTDNRNRAVSDVRVAVTR
CCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHEEEEEEE
NGGTMADGGSVQRLFQRKGVVSVSKTYEVEEGRKTETREVDEDQLMEATIDAEPEDIVDE
CCCCCCCCHHHHHHHHHCCCEEEHHEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCC
GEVFEIISDPSAVVDVRKAVQGAGIDYDSAEVSFKPDFTQRVELEDARKLYRILDALEDL
CCEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHCCHHHHHHHHHHHHHHHHH
DDVQNVFSNVDIPAEVAAALDEEE
HHHHHHHHCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
SGHSKWATTKHKKAAIDAKRGKLFARLIKNIEVAARLGGGDPSGNPTLYDAIQKAKKSS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCC
VPNDNITRAVKRGSGEGADAVNYETIMYEAYGPAGVAILIECLTDNRNRAVSDVRVAVTR
CCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHEEEEEEE
NGGTMADGGSVQRLFQRKGVVSVSKTYEVEEGRKTETREVDEDQLMEATIDAEPEDIVDE
CCCCCCCCHHHHHHHHHCCCEEEHHEEECCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCC
GEVFEIISDPSAVVDVRKAVQGAGIDYDSAEVSFKPDFTQRVELEDARKLYRILDALEDL
CCEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHCCHHHHHHHHHHHHHHHHH
DDVQNVFSNVDIPAEVAAALDEEE
HHHHHHHHCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA