| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is hisA
Identifier: 50842636
GI number: 50842636
Start: 1257363
End: 1258130
Strand: Direct
Name: hisA
Synonym: PPA1156
Alternate gene names: 50842636
Gene position: 1257363-1258130 (Clockwise)
Preceding gene: 50842635
Following gene: 50842637
Centisome position: 49.11
GC content: 60.55
Gene sequence:
>768_bases GTGACCGGAGAACTCACGCTGCTTCCAGCCGTTGATGTCCAGGGCGGTCGTGCCGTCCAGCTGCAACAGGGGGTGGCCAG TTCTGAACGGGCATTTGGCGACCCTCTCGATGTCGCTCAGAAGTGGCAAGGCCTGGGAGCCCAATGGATTCACCTGGTTG ATCTTGATGCTGCCTTCGGACATGGATCCAATACGAAGATCATCAGCAGCGTCGTTGAGCAGTTGGACATTAACGTTGAG GTTTCGGGGGGTATCCGAGATCAAAGGAGTCTCGAGTCCGCATTGTCCGCTGGCGCGACCCGGGTCAATATCGGTACCGC TGCCCTCGAGGACCCTCAGTGGTGTGACGAAGTAGTCGGGCGTTATGGCGAACAGGTAGCGATCGGCTTAGACGTGCGTG GCGATCAGCTGGCGGCTCGTGGATGGACGCGCGAGGGCGGAAAGGTTCTCGACGTTCTGGCGCGCTTGGAGGACGCCGGG TGTAGGCGATACGTCGTTACCGACGTCGCCAGTGATGGCATGCTAACCGGCCCTAATTACGAGCTTCTGGGGCGGATTTG CGCTCGTACCCAAGGCAAAGTTGTCGCTTCAGGTGGTATTGCCGCGCTGGAGGATTTGCGACGCCTGCGCGGTTTAGTCC CGATCGGTGTTGAGGGCGCGATCGTCGGGACGGCTCTGTACGTCGGCAATTTCACCTTGCCTGCGGCCTTGGATGTGTGC CGGGCCCCCATCCCGGCTGATTCATCCCCGATGCCTCCTACCGACTGA
Upstream 100 bases:
>100_bases CCCGGTAACGTCCACGCAGTTCCATCCTGAAAAGTCGGGGATAGCAGGTCTCGCTTTGCTCACACGCTGGCTGAATCAGC TGAGTTGATAGCCTGATTCT
Downstream 100 bases:
>100_bases GCGCCGATTTATCGTGGTTTTTCTTCCTCTGATTCGTTCTCAGACGGGGAGTGTAGACTGTTCCACTGTGTGCGTAGGCT CGTCCTGCGCCGGATGCTTA
Product: phosphoribosyl isomerase A
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTGELTLLPAVDVQGGRAVQLQQGVASSERAFGDPLDVAQKWQGLGAQWIHLVDLDAAFGHGSNTKIISSVVEQLDINVE VSGGIRDQRSLESALSAGATRVNIGTAALEDPQWCDEVVGRYGEQVAIGLDVRGDQLAARGWTREGGKVLDVLARLEDAG CRRYVVTDVASDGMLTGPNYELLGRICARTQGKVVASGGIAALEDLRRLRGLVPIGVEGAIVGTALYVGNFTLPAALDVC RAPIPADSSPMPPTD
Sequences:
>Translated_255_residues MTGELTLLPAVDVQGGRAVQLQQGVASSERAFGDPLDVAQKWQGLGAQWIHLVDLDAAFGHGSNTKIISSVVEQLDINVE VSGGIRDQRSLESALSAGATRVNIGTAALEDPQWCDEVVGRYGEQVAIGLDVRGDQLAARGWTREGGKVLDVLARLEDAG CRRYVVTDVASDGMLTGPNYELLGRICARTQGKVVASGGIAALEDLRRLRGLVPIGVEGAIVGTALYVGNFTLPAALDVC RAPIPADSSPMPPTD >Mature_254_residues TGELTLLPAVDVQGGRAVQLQQGVASSERAFGDPLDVAQKWQGLGAQWIHLVDLDAAFGHGSNTKIISSVVEQLDINVEV SGGIRDQRSLESALSAGATRVNIGTAALEDPQWCDEVVGRYGEQVAIGLDVRGDQLAARGWTREGGKVLDVLARLEDAGC RRYVVTDVASDGMLTGPNYELLGRICARTQGKVVASGGIAALEDLRRLRGLVPIGVEGAIVGTALYVGNFTLPAALDVCR APIPADSSPMPPTD
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=241, Percent_Identity=34.4398340248963, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI1788336, Length=234, Percent_Identity=24.3589743589744, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_PROAC (Q6A8L1)
Other databases:
- EMBL: AE017283 - RefSeq: YP_055863.1 - ProteinModelPortal: Q6A8L1 - GeneID: 2931368 - GenomeReviews: AE017283_GR - KEGG: pac:PPA1156 - NMPDR: fig|267747.1.peg.1140 - HOGENOM: HBG541613 - OMA: CARYVVT - ProtClustDB: PRK14024 - BioCyc: PACN267747:PPA1156-MONOMER - BRENDA: 5.3.1.16 - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR010188 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR01919
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 26754; Mature: 26622
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: ACT_SITE 12-12 ACT_SITE 131-131
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGELTLLPAVDVQGGRAVQLQQGVASSERAFGDPLDVAQKWQGLGAQWIHLVDLDAAFG CCCCEEEEEEEECCCCCEEEEHHCCCCCHHCCCCHHHHHHHHHCCCCEEEEEEEEHHHCC HGSNTKIISSVVEQLDINVEVSGGIRDQRSLESALSAGATRVNIGTAALEDPQWCDEVVG CCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH RYGEQVAIGLDVRGDQLAARGWTREGGKVLDVLARLEDAGCRRYVVTDVASDGMLTGPNY HCCCEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCH ELLGRICARTQGKVVASGGIAALEDLRRLRGLVPIGVEGAIVGTALYVGNFTLPAALDVC HHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHEECCCCHHHHHHHH RAPIPADSSPMPPTD CCCCCCCCCCCCCCC >Mature Secondary Structure TGELTLLPAVDVQGGRAVQLQQGVASSERAFGDPLDVAQKWQGLGAQWIHLVDLDAAFG CCCEEEEEEEECCCCCEEEEHHCCCCCHHCCCCHHHHHHHHHCCCCEEEEEEEEHHHCC HGSNTKIISSVVEQLDINVEVSGGIRDQRSLESALSAGATRVNIGTAALEDPQWCDEVVG CCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH RYGEQVAIGLDVRGDQLAARGWTREGGKVLDVLARLEDAGCRRYVVTDVASDGMLTGPNY HCCCEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCH ELLGRICARTQGKVVASGGIAALEDLRRLRGLVPIGVEGAIVGTALYVGNFTLPAALDVC HHHHHHHHCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHEECCCCHHHHHHHH RAPIPADSSPMPPTD CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA